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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 3 variables:
id Label1 AccNum GeneSym Info Gene Name
5249 8178897 NM_080680 COL11A2 link to infopage collagen, type XI, alpha 2
5250 8180105 NM_080680 COL11A2 link to infopage collagen, type XI, alpha 2
9432 8125568 NM_080680 COL11A2 link to infopage collagen, type XI, alpha 2

Fetching correlation data, please wait...
Getting list of correlations for id 5249.
Getting list of p-values for id 5249.
1 of 3 done.
Getting list of correlations for id 5250.
Getting list of p-values for id 5250.
2 of 3 done.
Getting list of correlations for id 9432.
Getting list of p-values for id 9432.
3 of 3 done.
Calculating corrections for multiple testing (n=51981), please wait...
Done; whole program took 0.354 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8178897 8180105 NM_080680 COL11A2 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8180105 8178897 NM_080680 COL11A2 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8125568 7897132 NM_022114 PRDM16 link to infopage 0.842770 1.821236e-29 9.466967e-25 3.155656e-25
4 8125568 8086985 NM_000094 COL7A1 link to infopage 0.840920 3.166266e-29 1.645857e-24 4.114642e-25
5 8125568 8019334 NM_178493 NOTUM link to infopage 0.839243 5.193564e-29 2.699667e-24 5.399333e-25
6 8125568 7935983 NM_005029 PITX3 link to infopage 0.838929 5.695363e-29 2.960507e-24 4.934178e-25
7 8125568 8028407 NM_000540 RYR1 link to infopage 0.833630 2.615815e-28 1.359727e-23 1.942467e-24
8 8125568 7914361 NM_001856 COL16A1 link to infopage 0.833531 2.690254e-28 1.398421e-23 1.748026e-24
9 8125568 8131056 NM_017781 CYP2W1 link to infopage 0.831104 5.309595e-28 2.759981e-23 3.066645e-24
10 8125568 7945688 NR_003512 INS-IGF2 link to infopage 0.830815 5.754369e-28 2.991178e-23 2.991178e-24
11 8125568 8067506 BC137326 C20orf151 link to infopage 0.830152 6.913553e-28 3.593734e-23 3.267031e-24
12 8125568 7987701 NM_016642 SPTBN5 link to infopage 0.830092 7.028289e-28 3.653375e-23 3.044479e-24
13 8125568 8005328 NM_016239 MYO15A link to infopage 0.827575 1.400522e-27 7.280051e-23 5.600039e-24
14 8125568 8067409 NM_005560 LAMA5 link to infopage 0.825247 2.623449e-27 1.363695e-22 9.740677e-24
15 8125568 8049942 NM_080741 NEU4 link to infopage 0.820040 1.033512e-26 5.372296e-22 3.581531e-23
16 8125568 7981447 NM_001100119 XRCC3 link to infopage 0.819189 1.287865e-26 6.694452e-22 4.184032e-23
17 8125568 7936762 NM_001001976 ATE1 link to infopage -0.818282 1.626089e-26 8.452572e-22 4.972101e-23
18 8125568 7927367 NM_001040084 ANXA8 link to infopage 0.817047 2.228720e-26 1.158511e-21 6.436173e-23
19 8125568 8032699 NM_015174 ZFR2 link to infopage 0.816734 2.412951e-26 1.254276e-21 6.601453e-23
20 8125568 8014269 NM_139285 GAS2L2 link to infopage 0.815810 3.049290e-26 1.585051e-21 7.925257e-23
21 8125568 8170965 NM_139250 CTAG1A link to infopage 0.815638 3.184228e-26 1.655194e-21 7.881874e-23
22 8125568 8176149 NM_139250 CTAG1A link to infopage 0.815638 3.184228e-26 1.655194e-21 7.523607e-23
23 8125568 8016320 NM_203400 RPRML link to infopage 0.813600 5.306256e-26 2.758245e-21 1.199237e-22
24 8125568 8093807 NM_173660 DOK7 link to infopage 0.813484 5.462413e-26 2.839417e-21 1.183090e-22
25 8125568 7968265 NM_000209 PDX1 link to infopage 0.813173 5.901423e-26 3.067619e-21 1.227047e-22
26 8125568 7977299 NM_001112726 KIAA0284 link to infopage 0.812661 6.700593e-26 3.483035e-21 1.339629e-22
27 8125568 7938090 NM_176875 CCKBR link to infopage 0.810981 1.013680e-25 5.269210e-21 1.951559e-22
28 8125568 7955305 NM_001652 AQP6 link to infopage 0.810935 1.025130e-25 5.328727e-21 1.903117e-22
29 8125568 7937560 NM_002457 MUC2 link to infopage 0.810326 1.190138e-25 6.186455e-21 2.133260e-22
30 8125568 7977418 NM_001134875 C14orf80 link to infopage 0.810069 1.266973e-25 6.585852e-21 2.195284e-22
31 8125568 8051187 NM_022823 FNDC4 link to infopage 0.809836 1.341089e-25 6.971114e-21 2.248747e-22
32 8125568 7937341 NM_178537 B4GALNT4 link to infopage 0.809783 1.358627e-25 7.062280e-21 2.206962e-22
33 8125568 8070933 NM_006657 FTCD link to infopage 0.809766 1.364081e-25 7.090631e-21 2.148676e-22
34 8125568 7896761 NM_152486 SAMD11 link to infopage 0.809609 1.417109e-25 7.366274e-21 2.166551e-22
35 8125568 8149652 NM_005144 HR link to infopage 0.809063 1.618033e-25 8.410697e-21 2.403056e-22
36 8125568 8157383 NM_032888 COL27A1 link to infopage 0.808805 1.722590e-25 8.954195e-21 2.487276e-22
37 8125568 7940377 NM_017870 TMEM132A link to infopage 0.808185 2.001151e-25 1.040218e-20 2.811401e-22
38 8125568 7946661 NM_015881 DKK3 link to infopage 0.806225 3.201795e-25 1.664325e-20 4.379803e-22
39 8125568 8096556 NM_015143 METAP1 link to infopage -0.806089 3.307072e-25 1.719049e-20 4.407818e-22
40 8125568 7949015 NM_001144936 C11orf95 link to infopage 0.806060 3.330332e-25 1.731140e-20 4.327850e-22
41 8125568 8159734 NM_000718 CACNA1B link to infopage 0.805678 3.647263e-25 1.895884e-20 4.624107e-22
42 8125568 8032312 NM_138813 ATP8B3 link to infopage 0.805461 3.840301e-25 1.996227e-20 4.752921e-22
43 8125568 8038109 NM_017708 FAM83E link to infopage 0.805348 3.944505e-25 2.050393e-20 4.768356e-22
44 8125568 8153101 NM_152888 COL22A1 link to infopage 0.804907 4.378876e-25 2.276183e-20 5.173144e-22
45 8125568 7928126 NM_014431 KIAA1274 link to infopage 0.804494 4.828551e-25 2.509929e-20 5.577620e-22
46 8125568 7912031 NM_019089 HES2 link to infopage 0.804472 4.853307e-25 2.522797e-20 5.484342e-22
47 8125568 8007259 ENST00000225928 link to infopage 0.804222 5.148126e-25 2.676047e-20 5.693718e-22
48 8125568 8159670 NM_006647 NOXA1 link to infopage 0.804170 5.211354e-25 2.708914e-20 5.643571e-22
49 8125568 8066451 NM_182970 RIMS4 link to infopage 0.804066 5.340223e-25 2.775901e-20 5.665104e-22
50 8125568 7945536 NM_016564 CEND1 link to infopage 0.803900 5.554036e-25 2.887043e-20 5.774086e-22

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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