[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 16981.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
16981	8174103	NM_001128127	GK		glycerol kinase

Fetching correlation data, please wait...
Getting list of correlations for id 16981.
Getting list of p-values for id 16981.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.084 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8174103	8166632	NM_001128127	GK	0.984035	4.871410e-79	8.440691e-75	8.440691e-75
2	8174103	8054329	NM_173647	RNF149	0.895948	4.342247e-38	7.523812e-34	3.761906e-34
3	8174103	8130556	NM_001024465	SOD2	0.874018	4.628675e-34	8.020105e-30	2.673368e-30
4	8174103	8162147	NM_024617	ZCCHC6	0.873281	6.129716e-34	1.062096e-29	2.655240e-30
5	8174103	8047381	NM_003879	CFLAR	0.870220	1.933078e-33	3.349445e-29	6.698890e-30
6	8174103	8004867	NM_001025579	NDEL1	0.862726	2.855723e-32	4.948112e-28	8.246853e-29
7	8174103	7951372	NM_033306	CASP4	0.861554	4.287873e-32	7.429597e-28	1.061371e-28
8	8174103	8131957	NM_013322	SNX10	0.860302	6.595550e-32	1.142811e-27	1.428514e-28
9	8174103	8174474	NM_022977	ACSL4	0.858005	1.437319e-31	2.490443e-27	2.767158e-28
10	8174103	8119529	NM_015255	UBR2	0.856471	2.399386e-31	4.157416e-27	4.157416e-28
11	8174103	7954810	NM_198578	LRRK2	0.856078	2.733210e-31	4.735834e-27	4.305303e-28
12	8174103	8068105	NR_027655	BACH1	0.852581	8.573605e-31	1.485549e-26	1.237957e-27
13	8174103	8047161	NM_001031716	OBFC2A	0.852269	9.482626e-31	1.643055e-26	1.263888e-27
14	8174103	7978595	NM_013448	BAZ1A	0.850677	1.578238e-30	2.734613e-26	1.953295e-27
15	8174103	8017212	NM_032582	USP32	0.850198	1.837725e-30	3.184227e-26	2.122818e-27
16	8174103	8052654	NM_020651	PELI1	0.849071	2.623449e-30	4.545650e-26	2.841031e-27
17	8174103	8142120	NM_005746	NAMPT	0.845871	7.095634e-30	1.229461e-25	7.232121e-27
18	8174103	7919751	NM_021960	MCL1	0.845134	8.893313e-30	1.540944e-25	8.560802e-27
19	8174103	8046003	NM_012198	GCA	0.844355	1.127947e-29	1.954395e-25	1.028629e-26
20	8174103	7933084	NM_005746	NAMPT	0.843941	1.278856e-29	2.215873e-25	1.107937e-26
21	8174103	7980005	NM_001005743	NUMB	0.838702	6.085768e-29	1.054481e-24	5.021339e-26
22	8174103	8091523	NM_176894	P2RY13	0.837064	9.801257e-29	1.698264e-24	7.719381e-26
23	8174103	7936596	NM_153810	C10orf46	0.835790	1.414459e-28	2.450834e-24	1.065580e-25
24	8174103	8052680	NM_004161	RAB1A	0.834970	1.788066e-28	3.098182e-24	1.290909e-25
25	8174103	7936064	NM_012229	NT5C2	0.834632	1.968599e-28	3.410992e-24	1.364397e-25
26	8174103	8016745	NM_001130528	SPAG9	0.834537	2.022487e-28	3.504364e-24	1.347832e-25
27	8174103	8008870	NM_030938	TMEM49	0.833877	2.439636e-28	4.227157e-24	1.565614e-25
28	8174103	8103951	NM_001995	ACSL1	0.832041	4.089643e-28	7.086125e-24	2.530759e-25
29	8174103	7909400	NM_002389	CD46	0.831977	4.163527e-28	7.214143e-24	2.487635e-25
30	8174103	8056060	NM_013450	BAZ2B	0.831601	4.623913e-28	8.011855e-24	2.670618e-25
31	8174103	8096919	NM_025144	ALPK1	0.831144	5.251778e-28	9.099755e-24	2.935405e-25
32	8174103	7955787	NM_138473	SP1	0.829830	7.555678e-28	1.309172e-23	4.091163e-25
33	8174103	8058182	NM_173822	FAM126B	0.828015	1.242458e-27	2.152807e-23	6.523658e-25
34	8174103	8096669	NM_017628	TET2	0.827503	1.428091e-27	2.474453e-23	7.277802e-25
35	8174103	7950838	NM_007166	PICALM	0.827344	1.491204e-27	2.583809e-23	7.382312e-25
36	8174103	8113358	NM_005668	ST8SIA4	0.827233	1.536586e-27	2.662442e-23	7.395673e-25
37	8174103	7954436	NM_006152	LRMP	0.827200	1.550380e-27	2.686344e-23	7.260390e-25
38	8174103	8166065	NM_138636	TLR8	0.825573	2.404435e-27	4.166164e-23	1.096359e-24
39	8174103	8055702	NM_004688	NMI	0.825534	2.429180e-27	4.209040e-23	1.079241e-24
40	8174103	7995697	NM_017839	LPCAT2	0.825068	2.752531e-27	4.769310e-23	1.192327e-24
41	8174103	7922504	NM_022457	RFWD2	0.823546	4.126461e-27	7.149919e-23	1.743883e-24
42	8174103	8101511	NM_014991	WDFY3	0.823166	4.562134e-27	7.904810e-23	1.882098e-24
43	8174103	8120943	NM_016230	CYB5R4	0.822897	4.897847e-27	8.486499e-23	1.973604e-24
44	8174103	8166876	NM_001356	DDX3X	0.822364	5.636570e-27	9.766485e-23	2.219656e-24
45	8174103	8147469	NM_016134	PGCP	0.822199	5.886570e-27	1.019966e-22	2.266591e-24
46	8174103	7922773	NM_000433	NCF2	0.821200	7.645817e-27	1.324791e-22	2.879980e-24
47	8174103	8174779	NM_013995	LAMP2	0.820960	8.138106e-27	1.410090e-22	3.000191e-24
48	8174103	8009457	NM_212472	PRKAR1A	0.820866	8.340962e-27	1.445239e-22	3.010914e-24
49	8174103	8099449	NM_033535	FBXL5	0.820689	8.734720e-27	1.513465e-22	3.088704e-24
50	8174103	8099834	NM_003263	TLR1	0.820022	1.038467e-26	1.799352e-22	3.598704e-24

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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