[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 2.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2 hsa-let-7a link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 2.
Getting list of p-values for id 2.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.072 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 hsa-let-7a hsa-let-7e MI0000066 link to infopage 0.853881 5.625632e-31 9.747533e-27 9.747533e-27
2 hsa-let-7a hsa-let-7d MI0000065 link to infopage 0.809949 1.304669e-25 2.260600e-21 1.130300e-21
3 hsa-let-7a hsa-let-7f link to infopage 0.711745 1.733066e-17 3.002884e-13 1.000961e-13
4 hsa-let-7a 8092957 ENST00000384638 link to infopage 0.663244 1.269598e-14 2.199832e-10 5.499580e-11
5 hsa-let-7a hsa-miR-140-5p link to infopage 0.635379 3.324587e-13 5.760512e-9 1.152102e-9
6 hsa-let-7a hsa-miR-20a-3p link to infopage 0.628717 6.914322e-13 1.198045e-8 1.996741e-9
7 hsa-let-7a 7925257 NM_000081 LYST link to infopage 0.602820 1.015632e-11 1.759785e-7 2.513979e-8
8 hsa-let-7a RNU11 link to infopage -0.602711 1.026632e-11 1.778845e-7 2.223556e-8
9 hsa-let-7a 8019885 NM_015295 SMCHD1 link to infopage 0.587733 4.360283e-11 7.555063e-7 8.394514e-8
10 hsa-let-7a 8019877 NM_015295 SMCHD1 link to infopage 0.585588 5.331277e-11 9.237504e-7 9.237504e-8
11 hsa-let-7a 7954436 NM_006152 LRMP link to infopage 0.584495 5.903219e-11 1.022851e-6 9.298643e-8
12 hsa-let-7a 8144931 NM_001693 ATP6V1B2 link to infopage 0.583949 6.211120e-11 1.076201e-6 8.968340e-8
13 hsa-let-7a 8156164 NM_017576 KIF27 link to infopage 0.583493 6.479662e-11 1.122731e-6 8.636392e-8
14 hsa-let-7a hsa-miR-190 MI0000486 link to infopage 0.582283 7.247427e-11 1.255762e-6 8.969726e-8
15 hsa-let-7a 7954810 NM_198578 LRRK2 link to infopage 0.582101 7.369847e-11 1.276973e-6 8.513155e-8
16 hsa-let-7a hsa-miR-768-3p link to infopage -0.577368 1.136847e-10 1.969815e-6 1.231134e-7
17 hsa-let-7a 7954711 NM_018169 C12orf35 link to infopage 0.574364 1.491562e-10 2.584430e-6 1.520253e-7
18 hsa-let-7a 8056060 NM_013450 BAZ2B link to infopage 0.569015 2.402646e-10 4.163065e-6 2.312814e-7
19 hsa-let-7a 7922504 NM_022457 RFWD2 link to infopage 0.566302 3.049851e-10 5.284477e-6 2.781304e-7
20 hsa-let-7a 7957759 NM_181861 APAF1 link to infopage 0.564336 3.620647e-10 6.273495e-6 3.136748e-7
21 hsa-let-7a 8082827 NM_025180 CEP63 link to infopage 0.562044 4.416057e-10 7.651702e-6 3.643668e-7
22 hsa-let-7a 8009241 NR_004380 SNORD104 link to infopage -0.555810 7.521371e-10 1.303228e-5 5.923764e-7
23 hsa-let-7a 8052654 NM_020651 PELI1 link to infopage 0.555192 7.923929e-10 1.372979e-5 5.969475e-7
24 hsa-let-7a 7908861 AF314543 OCR1 link to infopage 0.554489 8.407869e-10 1.456831e-5 6.070131e-7
25 hsa-let-7a 8111739 NM_001465 FYB link to infopage 0.554336 8.516525e-10 1.475658e-5 5.902633e-7
26 hsa-let-7a 7941272 NR_002819 MALAT1 link to infopage 0.553181 9.383937e-10 1.625955e-5 6.253672e-7
27 hsa-let-7a 8103226 NM_152680 TMEM154 link to infopage 0.553096 9.451266e-10 1.637621e-5 6.065262e-7
28 hsa-let-7a 8062908 NM_006282 STK4 link to infopage 0.552196 1.019016e-9 1.765649e-5 6.305890e-7
29 hsa-let-7a 8151764 link to infopage 0.551706 1.061563e-9 1.839370e-5 6.342656e-7
30 hsa-let-7a 8099410 NM_148894 BOD1L link to infopage 0.551561 1.074486e-9 1.861762e-5 6.205872e-7
31 hsa-let-7a 8091658 NM_020307 CCNL1 link to infopage 0.550043 1.219062e-9 2.112270e-5 6.813773e-7
32 hsa-let-7a 7978932 NM_006939 SOS2 link to infopage 0.548950 1.334509e-9 2.312304e-5 7.225951e-7
33 hsa-let-7a 8089926 ENST00000410333 link to infopage 0.548606 1.372889e-9 2.378804e-5 7.208498e-7
34 hsa-let-7a 7897801 NR_002754 RNU5E link to infopage -0.548579 1.375961e-9 2.384128e-5 7.012140e-7
35 hsa-let-7a 7924107 NM_014873 LPGAT1 link to infopage 0.548458 1.389795e-9 2.408098e-5 6.880279e-7
36 hsa-let-7a 8016745 NM_001130528 SPAG9 link to infopage 0.547588 1.493090e-9 2.587077e-5 7.186326e-7
37 hsa-let-7a 8068105 NR_027655 BACH1 link to infopage 0.546455 1.638746e-9 2.839456e-5 7.674205e-7
38 hsa-let-7a 8172056 NM_000328 RPGR link to infopage 0.545428 1.782318e-9 3.088223e-5 8.126903e-7
39 hsa-let-7a 7919747 ENST00000410192 link to infopage 0.544903 1.860393e-9 3.223503e-5 8.265392e-7
40 hsa-let-7a SNORD44 link to infopage -0.544495 1.923357e-9 3.332601e-5 8.331503e-7
41 hsa-let-7a hsa-miR-301a MI0000745 link to infopage 0.543335 2.113529e-9 3.662111e-5 8.931979e-7
42 hsa-let-7a 8089928 ENST00000410125 link to infopage 0.542718 2.221978e-9 3.850021e-5 9.166716e-7
43 hsa-let-7a 7969003 NM_021999 ITM2B link to infopage 0.542644 2.235267e-9 3.873047e-5 9.007087e-7
44 hsa-let-7a 8035445 NM_005354 JUND link to infopage -0.542438 2.272812e-9 3.938102e-5 8.950232e-7
45 hsa-let-7a 8014063 NM_006495 EVI2B link to infopage 0.541201 2.511477e-9 4.351636e-5 9.670301e-7
46 hsa-let-7a 7933877 NM_004241 JMJD1C link to infopage 0.540050 2.755172e-9 4.773886e-5 1.037801e-6
47 hsa-let-7a 8042503 NM_002357 MXD1 link to infopage 0.539053 2.984294e-9 5.170886e-5 1.100189e-6
48 hsa-let-7a 8162147 NM_024617 ZCCHC6 link to infopage 0.539026 2.990704e-9 5.181993e-5 1.079582e-6
49 hsa-let-7a 7962185 NR_004854 AMN1 link to infopage 0.536338 3.704867e-9 6.419424e-5 1.310086e-6
50 hsa-let-7a 7987048 NM_017762 MTMR10 link to infopage 0.534638 4.237979e-9 7.343147e-5 1.468629e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!