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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 2379.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2379 8118498 NM_000500 CYP21A2 link to infopage cytochrome P450, family 21, subfamily A, polypeptide 2

Fetching correlation data, please wait...
Getting list of correlations for id 2379.
Getting list of p-values for id 2379.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.122 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8118498 8178177 NM_000500 CYP21A2 link to infopage 0.982417 6.754681e-77 1.170384e-72 1.170384e-72
2 8118498 8179440 NM_000500 CYP21A2 link to infopage 0.982417 6.754681e-77 1.170384e-72 5.851918e-73
3 8118498 8159624 BC052297 C9orf169 link to infopage 0.751173 2.727506e-20 4.725951e-16 1.575317e-16
4 8118498 8028613 NM_172140 IL29 link to infopage 0.748656 4.267126e-20 7.393650e-16 1.848413e-16
5 8118498 8014269 NM_139285 GAS2L2 link to infopage 0.744304 9.136056e-20 1.583004e-15 3.166009e-16
6 8118498 7995340 link to infopage 0.742079 1.340595e-19 2.322849e-15 3.871415e-16
7 8118498 8060126 NM_198998 AQP12A link to infopage 0.740297 1.817251e-19 3.148751e-15 4.498215e-16
8 8118498 8035254 NM_031941 USHBP1 link to infopage 0.739950 1.927363e-19 3.339542e-15 4.174427e-16
9 8118498 7913450 NM_005529 HSPG2 link to infopage 0.738416 2.498667e-19 4.329440e-15 4.810489e-16
10 8118498 7977105 NM_152307 TRMT61A link to infopage 0.735631 3.983410e-19 6.902055e-15 6.902055e-16
11 8118498 8077192 NM_000482 APOA4 link to infopage 0.732835 6.325822e-19 1.096075e-14 9.964319e-16
12 8118498 8027556 NM_002333 LRP3 link to infopage 0.732085 7.154331e-19 1.239631e-14 1.033026e-15
13 8118498 8156415 NM_006648 WNK2 link to infopage 0.730972 8.580600e-19 1.486761e-14 1.143662e-15
14 8118498 8153101 NM_152888 COL22A1 link to infopage 0.730845 8.761071e-19 1.518031e-14 1.084308e-15
15 8118498 7951859 NM_000482 APOA4 link to infopage 0.730682 8.996662e-19 1.558852e-14 1.039234e-15
16 8118498 8021199 NM_002747 MAPK4 link to infopage 0.727675 1.463037e-18 2.535005e-14 1.584378e-15
17 8118498 8067530 BC093856 C20orf200 link to infopage 0.727577 1.486239e-18 2.575206e-14 1.514827e-15
18 8118498 8038109 NM_017708 FAM83E link to infopage 0.726284 1.827993e-18 3.167363e-14 1.759646e-15
19 8118498 7959234 NM_000545 HNF1A link to infopage 0.726167 1.862394e-18 3.226970e-14 1.698405e-15
20 8118498 8067409 NM_005560 LAMA5 link to infopage 0.725299 2.138434e-18 3.705265e-14 1.852633e-15
21 8118498 8137783 NM_001097620 TMEM184A link to infopage 0.724789 2.319092e-18 4.018291e-14 1.913472e-15
22 8118498 7998629 ENST00000431136 link to infopage 0.723654 2.775136e-18 4.808477e-14 2.185672e-15
23 8118498 7910265 NM_001098623 OBSCN link to infopage 0.723368 2.903134e-18 5.030261e-14 2.187070e-15
24 8118498 7945688 NR_003512 INS-IGF2 link to infopage 0.723098 3.029353e-18 5.248960e-14 2.187067e-15
25 8118498 7992302 NM_020825 CRAMP1L link to infopage 0.722765 3.192330e-18 5.531350e-14 2.212540e-15
26 8118498 8134827 NM_173564 C7orf51 link to infopage 0.722727 3.211027e-18 5.563746e-14 2.139902e-15
27 8118498 7935983 NM_005029 PITX3 link to infopage 0.721589 3.838752e-18 6.651406e-14 2.463484e-15
28 8118498 7921936 NM_177398 LMX1A link to infopage 0.720157 4.798685e-18 8.314681e-14 2.969529e-15
29 8118498 8131056 NM_017781 CYP2W1 link to infopage 0.720036 4.889925e-18 8.472773e-14 2.921646e-15
30 8118498 7997801 NM_013278 IL17C link to infopage 0.719498 5.315729e-18 9.210564e-14 3.070188e-15
31 8118498 8116272 NM_014244 ADAMTS2 link to infopage 0.719129 5.628528e-18 9.752550e-14 3.145984e-15
32 8118498 8153322 NM_015193 ARC link to infopage 0.718218 6.478516e-18 1.122532e-13 3.507914e-15
33 8118498 8165639 BC052297 C9orf169 link to infopage 0.718136 6.560737e-18 1.136779e-13 3.444784e-15
34 8118498 7992049 NM_207112 HAGHL link to infopage 0.717300 7.461075e-18 1.292780e-13 3.802295e-15
35 8118498 8120675 NM_001017361 C6orf221 link to infopage 0.717187 7.591381e-18 1.315359e-13 3.758167e-15
36 8118498 8006679 ENST00000411344 link to infopage 0.716745 8.123860e-18 1.407621e-13 3.910059e-15
37 8118498 8067551 ENST00000415185 link to infopage 0.716137 8.915339e-18 1.544761e-13 4.175029e-15
38 8118498 8153346 NM_023946 LYNX1 link to infopage 0.716126 8.930538e-18 1.547394e-13 4.072090e-15
39 8118498 8049729 NM_198998 AQP12A link to infopage 0.715910 9.230367e-18 1.599346e-13 4.100886e-15
40 8118498 7977216 NM_015656 KIF26A link to infopage 0.715699 9.531447e-18 1.651514e-13 4.128784e-15
41 8118498 7995310 ENST00000319817 link to infopage 0.715198 1.028722e-17 1.782467e-13 4.347481e-15
42 8118498 8049934 NM_022134 GAL3ST2 link to infopage 0.714985 1.062677e-17 1.841301e-13 4.384050e-15
43 8118498 8037732 NM_001029861 NANOS2 link to infopage 0.714160 1.204373e-17 2.086817e-13 4.853063e-15
44 8118498 8064059 NM_020882 COL20A1 link to infopage 0.713200 1.392417e-17 2.412641e-13 5.483274e-15
45 8118498 7996027 NM_002996 CX3CL1 link to infopage 0.712335 1.586250e-17 2.748495e-13 6.107768e-15
46 8118498 8114550 NM_004883 NRG2 link to infopage 0.712051 1.655420e-17 2.868346e-13 6.235536e-15
47 8118498 8010287 NM_030968 C1QTNF1 link to infopage 0.711634 1.762075e-17 3.053147e-13 6.496057e-15
48 8118498 7937560 NM_002457 MUC2 link to infopage 0.711080 1.914644e-17 3.317503e-13 6.911465e-15
49 8118498 8159036 NM_139025 ADAMTS13 link to infopage 0.710953 1.951316e-17 3.381044e-13 6.900091e-15
50 8118498 8008228 NM_138281 DLX4 link to infopage 0.710149 2.199985e-17 3.811914e-13 7.623829e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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