[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 4626.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4626 8077185 NM_000039 APOA1 link to infopage apolipoprotein A-I

Fetching correlation data, please wait...
Getting list of correlations for id 4626.
Getting list of p-values for id 4626.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.120 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8077185 7951865 NM_000039 APOA1 link to infopage 0.992736 1.483011e-96 2.569613e-92 2.569613e-92
2 8077185 7941743 NM_024036 LRFN4 link to infopage 0.807413 2.409314e-25 4.174618e-21 2.087309e-21
3 8077185 8033462 NM_206833 CTXN1 link to infopage 0.804177 5.202642e-25 9.014618e-21 3.004873e-21
4 8077185 8067409 NM_005560 LAMA5 link to infopage 0.800323 1.277557e-24 2.213624e-20 5.534059e-21
5 8077185 8032465 NM_144616 JSRP1 link to infopage 0.791877 8.554442e-24 1.482228e-19 2.964456e-20
6 8077185 8114550 NM_004883 NRG2 link to infopage 0.789936 1.308087e-23 2.266523e-19 3.777538e-20
7 8077185 8048628 NM_001005209 TMEM198 link to infopage 0.787625 2.156432e-23 3.736450e-19 5.337786e-20
8 8077185 8086540 NM_020208 SLC6A20 link to infopage 0.787312 2.306163e-23 3.995889e-19 4.994861e-20
9 8077185 8024808 NM_020209 SHD link to infopage 0.786572 2.702301e-23 4.682278e-19 5.202531e-20
10 8077185 7992758 NM_172229 KREMEN2 link to infopage 0.786234 2.904145e-23 5.032012e-19 5.032012e-20
11 8077185 8024048 NM_002777 PRTN3 link to infopage 0.785201 3.618248e-23 6.269338e-19 5.699398e-20
12 8077185 7937560 NM_002457 MUC2 link to infopage 0.784736 3.992988e-23 6.918650e-19 5.765542e-20
13 8077185 8131056 NM_017781 CYP2W1 link to infopage 0.784551 4.152047e-23 7.194252e-19 5.534040e-20
14 8077185 8003939 NM_003963 TM4SF5 link to infopage 0.784223 4.450236e-23 7.710924e-19 5.507803e-20
15 8077185 8038362 NM_178449 PTH2 link to infopage 0.784151 4.518353e-23 7.828951e-19 5.219301e-20
16 8077185 8153838 NM_004260 RECQL4 link to infopage 0.783393 5.300263e-23 9.183766e-19 5.739853e-20
17 8077185 8121209 NM_005604 POU3F2 link to infopage 0.783202 5.517436e-23 9.560062e-19 5.623566e-20
18 8077185 7998015 NM_032451 SPIRE2 link to infopage 0.782840 5.951559e-23 1.031227e-18 5.729037e-20
19 8077185 8110382 NM_030567 PRR7 link to infopage 0.782379 6.554203e-23 1.135647e-18 5.977088e-20
20 8077185 8012344 NM_032580 HES7 link to infopage 0.781388 8.058456e-23 1.396289e-18 6.981443e-20
21 8077185 8048460 NM_003936 CDK5R2 link to infopage 0.779619 1.162049e-22 2.013482e-18 9.588011e-20
22 8077185 7911435 NM_001014980 FAM132A link to infopage 0.778805 1.373954e-22 2.380650e-18 1.082114e-19
23 8077185 8024605 NM_021938 CELF5 link to infopage 0.778792 1.377500e-22 2.386795e-18 1.037737e-19
24 8077185 8024754 NM_032607 CREB3L3 link to infopage 0.778652 1.417686e-22 2.456425e-18 1.023510e-19
25 8077185 8030067 NM_004605 SULT2B1 link to infopage 0.776983 1.992746e-22 3.452831e-18 1.381132e-19
26 8077185 8137330 ENST00000356058 link to infopage 0.776847 2.048672e-22 3.549734e-18 1.365282e-19
27 8077185 8013112 NM_016084 RASD1 link to infopage 0.776635 2.138687e-22 3.705703e-18 1.372482e-19
28 8077185 7953150 NM_003213 TEAD4 link to infopage 0.776338 2.271281e-22 3.935448e-18 1.405517e-19
29 8077185 8001449 NM_024336 IRX3 link to infopage 0.776289 2.294044e-22 3.974890e-18 1.370652e-19
30 8077185 8086051 NM_015551 SUSD5 link to infopage 0.776105 2.381103e-22 4.125737e-18 1.375246e-19
31 8077185 7985920 NM_001039958 MESP2 link to infopage 0.775962 2.450996e-22 4.246842e-18 1.369949e-19
32 8077185 8062948 NM_014276 RBPJL link to infopage 0.775820 2.522309e-22 4.370405e-18 1.365752e-19
33 8077185 7896921 NM_152228 TAS1R3 link to infopage 0.775574 2.650648e-22 4.592777e-18 1.391751e-19
34 8077185 8125383 NM_004557 NOTCH4 link to infopage 0.774928 3.018915e-22 5.230874e-18 1.538492e-19
35 8077185 8019576 NM_033184 KRTAP2-4 link to infopage 0.774634 3.202923e-22 5.549704e-18 1.585630e-19
36 8077185 8015210 NM_033184 KRTAP2-4 link to infopage 0.774634 3.202923e-22 5.549704e-18 1.541585e-19
37 8077185 8172317 NM_006950 SYN1 link to infopage 0.774154 3.526431e-22 6.110247e-18 1.651418e-19
38 8077185 7923360 NM_003281 TNNI1 link to infopage 0.773812 3.776257e-22 6.543120e-18 1.721874e-19
39 8077185 8005328 NM_016239 MYO15A link to infopage 0.773781 3.799687e-22 6.583718e-18 1.688133e-19
40 8077185 7959761 NM_181709 FAM101A link to infopage 0.772878 4.549395e-22 7.882736e-18 1.970684e-19
41 8077185 7952893 BC024764 IQSEC3 link to infopage 0.772850 4.574256e-22 7.925814e-18 1.933125e-19
42 8077185 8003948 NM_001014985 GLTPD2 link to infopage 0.772555 4.850271e-22 8.404064e-18 2.000968e-19
43 8077185 7997569 NM_139174 ADAD2 link to infopage 0.771680 5.768922e-22 9.995811e-18 2.324607e-19
44 8077185 7945688 NR_003512 INS-IGF2 link to infopage 0.771537 5.935111e-22 1.028377e-17 2.337220e-19
45 8077185 8087116 NM_001008269 TMEM89 link to infopage 0.771141 6.417396e-22 1.111942e-17 2.470983e-19
46 8077185 7908812 NM_004767 GPR37L1 link to infopage 0.770747 6.935298e-22 1.201679e-17 2.612346e-19
47 8077185 8159036 NM_139025 ADAMTS13 link to infopage 0.770638 7.085189e-22 1.227651e-17 2.612023e-19
48 8077185 8035648 NM_001001524 TM6SF2 link to infopage 0.770599 7.140601e-22 1.237252e-17 2.577608e-19
49 8077185 8126379 ENST00000341865 link to infopage 0.769673 8.563524e-22 1.483802e-17 3.028167e-19
50 8077185 8049942 NM_080741 NEU4 link to infopage 0.769247 9.306239e-22 1.612492e-17 3.224984e-19

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!