[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 9240.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
9240 8105918 NM_001515 GTF2H2 link to infopage general transcription factor IIH, polypeptide 2, 44kDa

Fetching correlation data, please wait...
Getting list of correlations for id 9240.
Getting list of p-values for id 9240.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.124 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8105918 8177674 NM_001515 GTF2H2 link to infopage 0.997269 2.187168e-118 3.789706e-114 3.789706e-114
2 8105918 8112538 NM_001515 GTF2H2 link to infopage 0.996505 7.031683e-113 1.218380e-108 6.091898e-109
3 8105918 8177507 NM_001515 GTF2H2 link to infopage 0.996505 7.031683e-113 1.218380e-108 4.061266e-109
4 8105918 8105970 NM_001515 GTF2H2 link to infopage 0.995293 3.112589e-106 5.393183e-102 1.348296e-102
5 8105918 7934812 NM_015045 WAPAL link to infopage 0.729291 1.127473e-18 1.953572e-14 3.907145e-15
6 8105918 7967304 NM_198261 RSRC2 link to infopage 0.712653 1.512210e-17 2.620206e-13 4.367010e-14
7 8105918 7935707 NM_001278 CHUK link to infopage 0.712433 1.563060e-17 2.708314e-13 3.869019e-14
8 8105918 7978449 NM_015382 HECTD1 link to infopage 0.711132 1.899734e-17 3.291668e-13 4.114586e-14
9 8105918 7922912 NM_003292 TPR link to infopage 0.705975 4.073983e-17 7.058991e-13 7.843323e-14
10 8105918 8006112 NM_032141 CCDC55 link to infopage 0.703650 5.715210e-17 9.902745e-13 9.902745e-14
11 8105918 8105504 NM_152789 FAM133B link to infopage 0.703521 5.823393e-17 1.009019e-12 9.172902e-14
12 8105918 8084146 NM_001013439 FXR1 link to infopage 0.699650 1.015521e-16 1.759592e-12 1.466327e-13
13 8105918 8162086 NM_015239 AGTPBP1 link to infopage 0.698778 1.149650e-16 1.991998e-12 1.532306e-13
14 8105918 7913415 NM_032236 USP48 link to infopage 0.697447 1.388283e-16 2.405478e-12 1.718199e-13
15 8105918 7903519 NM_018061 PRPF38B link to infopage 0.694677 2.048689e-16 3.549764e-12 2.366509e-13
16 8105918 8107356 NM_152624 DCP2 link to infopage 0.693805 2.313423e-16 4.008469e-12 2.505293e-13
17 8105918 8095163 NM_001024924 EXOC1 link to infopage 0.693749 2.331409e-16 4.039632e-12 2.376254e-13
18 8105918 8173766 NM_153252 BRWD3 link to infopage 0.693294 2.483559e-16 4.303262e-12 2.390701e-13
19 8105918 8134122 NM_005751 AKAP9 link to infopage 0.692047 2.952255e-16 5.115372e-12 2.692301e-13
20 8105918 8048980 NM_016289 CAB39 link to infopage 0.691717 3.089591e-16 5.353335e-12 2.676668e-13
21 8105918 8090898 NM_005862 STAG1 link to infopage 0.690959 3.430086e-16 5.943310e-12 2.830148e-13
22 8105918 7971422 NM_015070 ZC3H13 link to infopage 0.690189 3.812795e-16 6.606431e-12 3.002923e-13
23 8105918 8066009 NM_184234 RBM39 link to infopage 0.688675 4.689516e-16 8.125525e-12 3.532837e-13
24 8105918 8008834 NM_004859 CLTC link to infopage 0.688279 4.949131e-16 8.575359e-12 3.573066e-13
25 8105918 7989253 NM_024755 SLTM link to infopage 0.687563 5.455166e-16 9.452165e-12 3.780866e-13
26 8105918 8055978 NM_152789 FAM133B link to infopage 0.687179 5.747084e-16 9.957973e-12 3.829989e-13
27 8105918 8146717 NM_013257 SGK3 link to infopage 0.686938 5.937213e-16 1.028741e-11 3.810152e-13
28 8105918 8084016 NM_006218 PIK3CA link to infopage 0.686845 6.012401e-16 1.041769e-11 3.720603e-13
29 8105918 8131975 NM_006024 TAX1BP1 link to infopage 0.685923 6.809782e-16 1.179931e-11 4.068728e-13
30 8105918 8166500 NM_003410 ZFX link to infopage 0.684274 8.499487e-16 1.472706e-11 4.909020e-13
31 8105918 7900395 NM_012421 RLF link to infopage 0.682957 1.013532e-15 1.756146e-11 5.664988e-13
32 8105918 8114814 NM_000176 NR3C1 link to infopage 0.681404 1.245654e-15 2.158344e-11 6.744826e-13
33 8105918 8045455 NM_014607 UBXN4 link to infopage 0.681300 1.262938e-15 2.188293e-11 6.631192e-13
34 8105918 7932041 NM_080599 UPF2 link to infopage 0.681106 1.295709e-15 2.245076e-11 6.603164e-13
35 8105918 8140942 NM_001040057 FAM133B link to infopage 0.680994 1.315029e-15 2.278551e-11 6.510145e-13
36 8105918 7922889 NM_006469 IVNS1ABP link to infopage 0.680682 1.370411e-15 2.374510e-11 6.595862e-13
37 8105918 7949931 NM_017635 SUV420H1 link to infopage 0.680465 1.410216e-15 2.443481e-11 6.604002e-13
38 8105918 8146637 NM_152758 YTHDF3 link to infopage 0.680092 1.481282e-15 2.566617e-11 6.754256e-13
39 8105918 7967420 NM_018183 SBNO1 link to infopage 0.679550 1.590905e-15 2.756561e-11 7.068104e-13
40 8105918 7978866 NM_004713 SDCCAG1 link to infopage 0.679008 1.708353e-15 2.960064e-11 7.400159e-13
41 8105918 7971039 NM_001014286 FAM48A link to infopage 0.678899 1.732748e-15 3.002332e-11 7.322762e-13
42 8105918 8173673 NM_000489 ATRX link to infopage 0.678640 1.792785e-15 3.106358e-11 7.396090e-13
43 8105918 7985166 NM_004136 IREB2 link to infopage 0.678298 1.874816e-15 3.248494e-11 7.554636e-13
44 8105918 8042601 NM_014497 ZNF638 link to infopage 0.678220 1.893892e-15 3.281547e-11 7.458062e-13
45 8105918 8157700 NM_012197 RABGAP1 link to infopage 0.677837 1.991281e-15 3.450293e-11 7.667318e-13
46 8105918 7903988 NM_001010935 RAP1A link to infopage 0.677534 2.071422e-15 3.589152e-11 7.802505e-13
47 8105918 7976598 NM_032632 PAPOLA link to infopage 0.677401 2.107865e-15 3.652298e-11 7.770847e-13
48 8105918 7913824 NM_020317 C1orf63 link to infopage 0.677156 2.176012e-15 3.770375e-11 7.854949e-13
49 8105918 7942839 NM_015885 PCF11 link to infopage 0.677147 2.178695e-15 3.775026e-11 7.704134e-13
50 8105918 8089930 NM_004487 GOLGB1 link to infopage 0.676690 2.312214e-15 4.006373e-11 8.012747e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!