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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2476 7980908 NM_006329 FBLN5 link to infopage fibulin 5

Fetching correlation data, please wait...
Getting list of correlations for id 2476.
Getting list of p-values for id 2476.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.119 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7980908 8010673 NM_012140 SLC25A10 link to infopage 0.682469 1.081512e-15 1.873937e-11 1.873937e-11
2 7980908 7972899 BX647655 DKFZp451A211 link to infopage 0.681905 1.165567e-15 2.019578e-11 1.009789e-11
3 7980908 8036270 NM_152658 THAP8 link to infopage 0.681898 1.166672e-15 2.021492e-11 6.738308e-12
4 7980908 8028407 NM_000540 RYR1 link to infopage 0.674050 3.253173e-15 5.636773e-11 1.409193e-11
5 7980908 8037728 NM_001012643 MYPOP link to infopage 0.672329 4.056118e-15 7.028036e-11 1.405607e-11
6 7980908 8001918 NM_001128850 RRAD link to infopage 0.671925 4.270867e-15 7.400130e-11 1.233355e-11
7 7980908 8056041 link to infopage 0.670426 5.168497e-15 8.955454e-11 1.279351e-11
8 7980908 8159017 NM_153710 C9orf96 link to infopage 0.668825 6.328480e-15 1.096536e-10 1.370670e-11
9 7980908 7952243 NM_015645 C1QTNF5 link to infopage 0.668027 6.997556e-15 1.212467e-10 1.347185e-11
10 7980908 7920552 NM_002249 KCNN3 link to infopage 0.667470 7.504075e-15 1.300231e-10 1.300231e-11
11 7980908 7906307 NM_018240 KIRREL link to infopage 0.666180 8.818598e-15 1.527998e-10 1.389089e-11
12 7980908 8093576 NR_003004 SCARNA22 link to infopage 0.665739 9.317334e-15 1.614414e-10 1.345345e-11
13 7980908 8005879 NR_027384 SLC13A2 link to infopage 0.663154 1.283645e-14 2.224173e-10 1.710902e-11
14 7980908 7911750 NM_001010926 HES5 link to infopage 0.662407 1.407518e-14 2.438806e-10 1.742004e-11
15 7980908 7970146 NM_005986 SOX1 link to infopage 0.659208 2.081076e-14 3.605881e-10 2.403920e-11
16 7980908 8110821 NM_001044 SLC6A3 link to infopage 0.659015 2.130486e-14 3.691494e-10 2.307184e-11
17 7980908 8067798 NM_018419 SOX18 link to infopage 0.658666 2.222666e-14 3.851214e-10 2.265420e-11
18 7980908 8029437 NM_006505 PVR link to infopage 0.658513 2.264278e-14 3.923314e-10 2.179619e-11
19 7980908 8016168 NM_133373 PLCD3 link to infopage 0.656288 2.962039e-14 5.132324e-10 2.701223e-11
20 7980908 8174469 NM_012282 KCNE1L link to infopage 0.655775 3.150385e-14 5.458671e-10 2.729336e-11
21 7980908 8116272 NM_014244 ADAMTS2 link to infopage 0.654854 3.517719e-14 6.095152e-10 2.902453e-11
22 7980908 7922823 NM_025191 EDEM3 link to infopage -0.654050 3.872121e-14 6.709223e-10 3.049647e-11
23 7980908 8172580 NM_005183 CACNA1F link to infopage 0.652903 4.438070e-14 7.689843e-10 3.343410e-11
24 7980908 8111216 ENST00000426411 link to infopage 0.652763 4.512233e-14 7.818347e-10 3.257644e-11
25 7980908 7942717 NM_000260 MYO7A link to infopage 0.652087 4.888455e-14 8.470225e-10 3.388090e-11
26 7980908 8042558 NM_024933 ANKRD53 link to infopage 0.649368 6.732475e-14 1.166536e-9 4.486677e-11
27 7980908 8153838 NM_004260 RECQL4 link to infopage 0.647586 8.289884e-14 1.436388e-9 5.319956e-11
28 7980908 8069985 NR_002996 SNORA80 link to infopage 0.646314 9.608677e-14 1.664895e-9 5.946055e-11
29 7980908 8024605 NM_021938 CELF5 link to infopage 0.646070 9.883511e-14 1.712516e-9 5.905227e-11
30 7980908 7953021 NM_024551 ADIPOR2 link to infopage -0.645729 1.028095e-13 1.781380e-9 5.937932e-11
31 7980908 8025375 NM_005624 CCL25 link to infopage 0.645398 1.068183e-13 1.850841e-9 5.970454e-11
32 7980908 8067394 NM_007232 HRH3 link to infopage 0.645215 1.091043e-13 1.890449e-9 5.907654e-11
33 7980908 8065710 NM_005225 E2F1 link to infopage 0.645015 1.116390e-13 1.934369e-9 5.861726e-11
34 7980908 8052018 NM_022055 KCNK12 link to infopage 0.644972 1.121936e-13 1.943979e-9 5.717586e-11
35 7980908 8179070 NM_033229 TRIM15 link to infopage 0.643748 1.291471e-13 2.237731e-9 6.393518e-11
36 7980908 8177760 NM_033229 TRIM15 link to infopage 0.643748 1.291471e-13 2.237731e-9 6.215920e-11
37 7980908 8117849 NM_033229 TRIM15 link to infopage 0.643748 1.291471e-13 2.237731e-9 6.047923e-11
38 7980908 8076007 NM_025045 BAIAP2L2 link to infopage 0.643209 1.373821e-13 2.380420e-9 6.264263e-11
39 7980908 8144121 NM_002847 PTPRN2 link to infopage 0.642851 1.431307e-13 2.480026e-9 6.359040e-11
40 7980908 7899075 NM_004455 EXTL1 link to infopage 0.642416 1.504161e-13 2.606260e-9 6.515651e-11
41 7980908 8163548 NM_138424 KIF12 link to infopage 0.641931 1.589650e-13 2.754387e-9 6.718016e-11
42 7980908 7996027 NM_002996 CX3CL1 link to infopage 0.640967 1.774043e-13 3.073884e-9 7.318771e-11
43 7980908 7967969 NM_138284 IL17D link to infopage 0.639727 2.041525e-13 3.537351e-9 8.226398e-11
44 7980908 8125383 NM_004557 NOTCH4 link to infopage 0.639721 2.042946e-13 3.539813e-9 8.045030e-11
45 7980908 8090770 link to infopage 0.639485 2.098082e-13 3.635347e-9 8.078549e-11
46 7980908 7976322 NM_001275 CHGA link to infopage 0.639311 2.139706e-13 3.707469e-9 8.059715e-11
47 7980908 7991939 NM_145294 WDR90 link to infopage 0.638150 2.438695e-13 4.225527e-9 8.990483e-11
48 7980908 8032623 NM_001060 TBXA2R link to infopage 0.637944 2.495788e-13 4.324452e-9 9.009274e-11
49 7980908 8148902 NM_005309 GPT link to infopage 0.637379 2.659023e-13 4.607289e-9 9.402630e-11
50 7980908 8013947 NM_032854 CORO6 link to infopage 0.636289 3.003759e-13 5.204613e-9 1.040923e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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