[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4744	7954777	NM_032834	ALG10		asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)

Fetching correlation data, please wait...
Getting list of correlations for id 4744.
Getting list of p-values for id 4744.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.149 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7954777	7954789	NM_001013620	ALG10B	0.973110	1.699884e-67	2.945389e-63	2.945389e-63
2	7954777	8152465	NM_003756	EIF3H	0.817469	2.001711e-26	3.468365e-22	1.734182e-22
3	7954777	8068168	NM_000454	SOD1	0.813409	5.565412e-26	9.643189e-22	3.214396e-22
4	7954777	7928300	NM_173473	ANAPC16	0.810342	1.185233e-25	2.053654e-21	5.134134e-22
5	7954777	8145652	NM_015344	LEPROTL1	0.809952	1.303705e-25	2.258929e-21	4.517859e-22
6	7954777	7956743	NM_001034996	RPL14	0.809754	1.368108e-25	2.370521e-21	3.950869e-22
7	7954777	8041149	NM_015131	WDR43	0.809144	1.586543e-25	2.749003e-21	3.927147e-22
8	7954777	8121734	NM_014034	ASF1A	0.808702	1.766125e-25	3.060165e-21	3.825206e-22
9	7954777	7913712	NM_006625	SRSF10	0.808598	1.811230e-25	3.138318e-21	3.487020e-22
10	7954777	8039947	NM_006625	SRSF10	0.808047	2.068619e-25	3.584296e-21	3.584296e-22
11	7954777	8041257	NM_017964	SLC30A6	0.807616	2.294918e-25	3.976404e-21	3.614913e-22
12	7954777	8096808	NM_017918	CCDC109B	0.803707	5.812005e-25	1.007046e-20	8.392051e-22
13	7954777	7969271	NM_001130912	SUGT1	0.803691	5.832787e-25	1.010647e-20	7.774208e-22
14	7954777	8009366	NM_015462	NOL11	0.802675	7.400629e-25	1.282307e-20	9.159335e-22
15	7954777	7954021	NM_001310	CREBL2	0.801369	1.003074e-24	1.738026e-20	1.158684e-21
16	7954777	7931187	NM_004725	BUB3	0.800442	1.243037e-24	2.153810e-20	1.346131e-21
17	7954777	8129706	NM_006620	HBS1L	0.800024	1.368607e-24	2.371386e-20	1.394933e-21
18	7954777	8078270	NM_002948	RPL15	0.796906	2.786975e-24	4.828991e-20	2.682773e-21
19	7954777	8147156	NM_007013	WWP1	0.796692	2.925132e-24	5.068376e-20	2.667566e-21
20	7954777	7985044	NM_173469	UBE2Q2	0.796386	3.134639e-24	5.431389e-20	2.715695e-21
21	7954777	7987361	NM_014106	ZNF770	0.795426	3.889976e-24	6.740161e-20	3.209601e-21
22	7954777	8142019	NM_002553	ORC5L	0.794951	4.326302e-24	7.496184e-20	3.407356e-21
23	7954777	8150818	NM_006756	TCEA1	0.794514	4.770288e-24	8.265478e-20	3.593686e-21
24	7954777	7901418	NM_152265	BTF3L4	0.792771	7.025254e-24	1.217266e-19	5.071940e-21
25	7954777	8063283	NM_001316	CSE1L	0.791904	8.504778e-24	1.473623e-19	5.894492e-21
26	7954777	7925364	NM_018072	HEATR1	0.790788	1.086244e-23	1.882136e-19	7.238984e-21
27	7954777	8027650	NM_005499	UBA2	0.790426	1.175766e-23	2.037249e-19	7.545368e-21
28	7954777	7955646	NM_001417	EIF4B	0.789612	1.403491e-23	2.431829e-19	8.685104e-21
29	7954777	8097480	NM_057175	NAA15	0.789531	1.428486e-23	2.475137e-19	8.534955e-21
30	7954777	7903281	NM_012243	SLC35A3	0.789306	1.500065e-23	2.599162e-19	8.663873e-21
31	7954777	7980891	NM_001128596	TC2N	0.789038	1.589573e-23	2.754254e-19	8.884689e-21
32	7954777	8089584	NM_015412	C3orf17	0.788618	1.740962e-23	3.016565e-19	9.426766e-21
33	7954777	8109697	NM_004060	CCNG1	0.788090	1.950843e-23	3.380225e-19	1.024311e-20
34	7954777	8108403	NM_199189	MATR3	0.784623	4.089243e-23	7.085431e-19	2.083950e-20
35	7954777	8097647	NM_002940	ABCE1	0.784389	4.296781e-23	7.445032e-19	2.127152e-20
36	7954777	7956658	NM_004731	SLC16A7	0.782656	6.185222e-23	1.071713e-18	2.976982e-20
37	7954777	8178322	NM_006937	SUMO2	0.782599	6.259701e-23	1.084618e-18	2.931401e-20
38	7954777	7903010	NM_000969	RPL5	0.782343	6.604619e-23	1.144382e-18	3.011532e-20
39	7954777	7912852	NM_001412	EIF1AX	0.782258	6.722661e-23	1.164836e-18	2.986758e-20
40	7954777	8105801	NM_022902	SLC30A5	0.782228	6.764200e-23	1.172033e-18	2.930082e-20
41	7954777	8140730	NM_024315	C7orf23	0.781694	7.561265e-23	1.310140e-18	3.195464e-20
42	7954777	8092564	NM_004593	TRA2B	0.781079	8.593967e-23	1.489077e-18	3.545421e-20
43	7954777	7986765	NM_000969	RPL5	0.781021	8.696383e-23	1.506822e-18	3.504238e-20
44	7954777	8158372	NM_003011	SET	0.780313	1.007052e-22	1.744919e-18	3.965725e-20
45	7954777	8109821	NM_006013	RPL10	0.780165	1.038458e-22	1.799337e-18	3.998526e-20
46	7954777	7901895	NM_032852	ATG4C	0.779934	1.089133e-22	1.887140e-18	4.102479e-20
47	7954777	7957242	NM_001136262	ATXN7L3B	0.779877	1.101865e-22	1.909201e-18	4.062130e-20
48	7954777	8059319	NM_005687	FARSB	0.779456	1.201922e-22	2.082571e-18	4.338690e-20
49	7954777	8119080	NM_003017	SRSF3	0.779418	1.211155e-22	2.098567e-18	4.282791e-20
50	7954777	8084128	NM_133462	TTC14	0.778867	1.356401e-22	2.350237e-18	4.700473e-20

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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