[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
1360	7987928	NM_138477	CDAN1		congenital dyserythropoietic anemia, type I

Fetching correlation data, please wait...
Getting list of correlations for id 1360.
Getting list of p-values for id 1360.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.123 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7987928	7959195	NM_001033677	CABP1	0.634919	3.498790e-13	6.062353e-9	6.062353e-9
2	7987928	7978776	NM_018353	C14orf106	-0.621869	1.441479e-12	2.497651e-8	1.248826e-8
3	7987928	8165538	NM_001033113	ENTPD8	0.616581	2.511578e-12	4.351812e-8	1.450604e-8
4	7987928	7966343	ENST00000365465		-0.612929	3.663004e-12	6.346887e-8	1.586722e-8
5	7987928	8057719	NM_014362	HIBCH	-0.609160	5.380061e-12	9.322033e-8	1.864407e-8
6	7987928	7896961	NM_031921	ATAD3B	0.608692	5.641186e-12	9.774483e-8	1.629080e-8
7	7987928	8039273	NM_145057	CDC42EP5	0.601628	1.142698e-11	1.979953e-7	2.828505e-8
8	7987928	8098721	ENST00000362702		0.601267	1.184058e-11	2.051617e-7	2.564522e-8
9	7987928	7955578	NM_181711	GRASP	0.592513	2.770540e-11	4.800515e-7	5.333905e-8
10	7987928	8083094	NM_006506	RASA2	-0.590058	3.500291e-11	6.064954e-7	6.064954e-8
11	7987928	7994730	NM_031478	FAM57B	0.589964	3.531777e-11	6.119509e-7	5.563190e-8
12	7987928	8048014	NM_199229	RPE	-0.588646	4.000537e-11	6.931730e-7	5.776442e-8
13	7987928	7931216	NM_032182	FAM175B	-0.587459	4.474104e-11	7.752280e-7	5.963293e-8
14	7987928	8045619	NM_015630	EPC2	-0.586220	5.025652e-11	8.707947e-7	6.219962e-8
15	7987928	8030525	NM_017432	PTOV1	0.585983	5.138339e-11	8.903200e-7	5.935467e-8
16	7987928	8039569	NM_001002836	ZNF787	0.584795	5.740766e-11	9.947026e-7	6.216891e-8
17	7987928	8073992	NM_052839	PANX2	0.584754	5.762490e-11	9.984667e-7	5.873333e-8
18	7987928	8165453	NM_001013653	LRRC26	0.583095	6.723062e-11	1.164905e-6	6.471694e-8
19	7987928	8169519	NM_019045	WDR44	-0.583033	6.761717e-11	1.171603e-6	6.166330e-8
20	7987928	8061324	NM_012255	XRN2	-0.581504	7.786980e-11	1.349250e-6	6.746250e-8
21	7987928	8024038	NM_001700	AZU1	0.580116	8.846401e-11	1.532816e-6	7.299124e-8
22	7987928	7909661	NM_012424	RPS6KC1	-0.578407	1.034270e-10	1.792079e-6	8.145816e-8
23	7987928	8091562	NM_020865	DHX36	-0.576997	1.175788e-10	2.037288e-6	8.857774e-8
24	7987928	8085195	NM_198560	LHFPL4	0.576478	1.232426e-10	2.135425e-6	8.897605e-8
25	7987928	8171087	NM_013239	PPP2R3B	0.575678	1.324911e-10	2.295673e-6	9.182693e-8
26	7987928	8104314	NM_024337	IRX1	0.574131	1.523056e-10	2.638999e-6	1.015000e-7
27	7987928	8030403	NM_020719	PRR12	0.573708	1.582100e-10	2.741305e-6	1.015298e-7
28	7987928	8118302	BC137541	C6orf26	0.573581	1.600187e-10	2.772645e-6	9.902302e-8
29	7987928	7903541	NM_007269	STXBP3	-0.573254	1.647775e-10	2.855099e-6	9.845169e-8
30	7987928	8062873	NM_022358	KCNK15	0.573002	1.685479e-10	2.920430e-6	9.734768e-8
31	7987928	8162472	NM_021570	BARX1	0.572801	1.716001e-10	2.973315e-6	9.591340e-8
32	7987928	8030539	NM_024682	TBC1D17	0.571469	1.932682e-10	3.348759e-6	1.046487e-7
33	7987928	8099860	NM_002913	RFC1	-0.571362	1.951185e-10	3.380818e-6	1.024490e-7
34	7987928	8033635	NM_030957	ADAMTS10	0.571331	1.956556e-10	3.390125e-6	9.970955e-8
35	7987928	7992302	NM_020825	CRAMP1L	0.569370	2.328375e-10	4.034376e-6	1.152679e-7
36	7987928	7977033	NM_030943	AMN	0.568989	2.408196e-10	4.172682e-6	1.159078e-7
37	7987928	8086150	NM_006309	LRRFIP2	-0.568014	2.624415e-10	4.547324e-6	1.229007e-7
38	7987928	7998577	NM_002513	NME3	0.566501	2.997206e-10	5.193259e-6	1.366647e-7
39	7987928	7902771	NM_016009	SH3GLB1	-0.566305	3.049180e-10	5.283314e-6	1.354696e-7
40	7987928	8024655	NM_001135580	C19orf71	0.565769	3.195605e-10	5.537024e-6	1.384256e-7
41	7987928	8019367	NM_002917	RFNG	0.565360	3.311697e-10	5.738178e-6	1.399556e-7
42	7987928	7997733	NM_005251	FOXC2	0.565295	3.330476e-10	5.770716e-6	1.373980e-7
43	7987928	7953274	NM_000217	KCNA1	0.565289	3.332258e-10	5.773804e-6	1.342745e-7
44	7987928	8062948	NM_014276	RBPJL	0.563925	3.752257e-10	6.501536e-6	1.477622e-7
45	7987928	8055978	NM_152789	FAM133B	-0.563323	3.953675e-10	6.850533e-6	1.522341e-7
46	7987928	8110546	NM_014757	MAML1	0.563276	3.969506e-10	6.877963e-6	1.495209e-7
47	7987928	7899829	NM_022753	S100PBP	-0.563248	3.979326e-10	6.894979e-6	1.467017e-7
48	7987928	7912004	NM_207370	GPR153	0.562900	4.101122e-10	7.106014e-6	1.480420e-7
49	7987928	7989323	NM_004330	BNIP2	-0.562431	4.270766e-10	7.399956e-6	1.510195e-7
50	7987928	8060505	NM_001110514	EBF4	0.561173	4.760285e-10	8.248146e-6	1.649629e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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