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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7157 8098782 NM_006651 CPLX1 link to infopage complexin 1

Fetching correlation data, please wait...
Getting list of correlations for id 7157.
Getting list of p-values for id 7157.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.151 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8098782 8131379 ENST00000384488 link to infopage 0.827022 1.626861e-27 2.818861e-23 2.818861e-23
2 8098782 8006063 NM_152345 ANKRD13B link to infopage 0.826424 1.912138e-27 3.313161e-23 1.656580e-23
3 8098782 8042896 NM_016170 TLX2 link to infopage 0.823256 4.455712e-27 7.720413e-23 2.573471e-23
4 8098782 8121209 NM_005604 POU3F2 link to infopage 0.817688 1.892611e-26 3.279326e-22 8.198316e-23
5 8098782 7991939 NM_145294 WDR90 link to infopage 0.815900 2.980819e-26 5.164865e-22 1.032973e-22
6 8098782 8048460 NM_003936 CDK5R2 link to infopage 0.815605 3.210634e-26 5.563066e-22 9.271777e-23
7 8098782 8016168 NM_133373 PLCD3 link to infopage 0.815345 3.428272e-26 5.940167e-22 8.485953e-23
8 8098782 8004763 NM_000180 GUCY2D link to infopage 0.814079 4.709314e-26 8.159828e-22 1.019978e-22
9 8098782 8046276 NM_001003845 SP5 link to infopage 0.813523 5.408993e-26 9.372162e-22 1.041351e-22
10 8098782 8161265 NM_001007563 IGFBPL1 link to infopage 0.808730 1.754092e-25 3.039315e-21 3.039315e-22
11 8098782 7992269 ENST00000301714 link to infopage 0.808591 1.813968e-25 3.143063e-21 2.857330e-22
12 8098782 8049239 AY358535 C2orf82 link to infopage 0.808523 1.844271e-25 3.195568e-21 2.662973e-22
13 8098782 8053183 NM_001009812 LBX2 link to infopage 0.808316 1.938821e-25 3.359395e-21 2.584150e-22
14 8098782 8040479 NM_182828 GDF7 link to infopage 0.806991 2.665867e-25 4.619148e-21 3.299391e-22
15 8098782 8110382 NM_030567 PRR7 link to infopage 0.806988 2.667859e-25 4.622600e-21 3.081733e-22
16 8098782 8062948 NM_014276 RBPJL link to infopage 0.806402 3.069312e-25 5.318196e-21 3.323873e-22
17 8098782 8075200 NM_012265 RHBDD3 link to infopage 0.806035 3.350423e-25 5.805278e-21 3.414869e-22
18 8098782 7958577 NM_032829 C12orf34 link to infopage 0.805209 4.077035e-25 7.064278e-21 3.924599e-22
19 8098782 8076169 NM_014293 NPTXR link to infopage 0.805191 4.093649e-25 7.093066e-21 3.733193e-22
20 8098782 8024038 NM_001700 AZU1 link to infopage 0.804872 4.415358e-25 7.650490e-21 3.825245e-22
21 8098782 8013259 ENST00000300983 link to infopage 0.804848 4.440361e-25 7.693813e-21 3.663721e-22
22 8098782 8019693 NM_148896 NPB link to infopage 0.802189 8.290265e-25 1.436454e-20 6.529337e-22
23 8098782 8010696 NM_148896 NPB link to infopage 0.802189 8.290265e-25 1.436454e-20 6.245453e-22
24 8098782 7949015 NM_001144936 C11orf95 link to infopage 0.801715 9.256267e-25 1.603833e-20 6.682639e-22
25 8098782 8137330 ENST00000356058 link to infopage 0.801642 9.413946e-25 1.631154e-20 6.524618e-22
26 8098782 7960894 NR_024420 LOC389634 link to infopage 0.801638 9.423277e-25 1.632771e-20 6.279890e-22
27 8098782 7977432 NM_025268 TMEM121 link to infopage 0.801508 9.711136e-25 1.682649e-20 6.232032e-22
28 8098782 8065327 NM_033176 NKX2-4 link to infopage 0.801499 9.732925e-25 1.686424e-20 6.022943e-22
29 8098782 8005328 NM_016239 MYO15A link to infopage 0.800530 1.217914e-24 2.110279e-20 7.276825e-22
30 8098782 8162920 NM_147180 PPP3R2 link to infopage 0.800379 1.261108e-24 2.185122e-20 7.283740e-22
31 8098782 7937433 NM_000797 DRD4 link to infopage 0.797700 2.327968e-24 4.033670e-20 1.301184e-21
32 8098782 8162472 NM_021570 BARX1 link to infopage 0.795781 3.591878e-24 6.223647e-20 1.944890e-21
33 8098782 8159670 NM_006647 NOXA1 link to infopage 0.795736 3.628384e-24 6.286900e-20 1.905121e-21
34 8098782 8054154 NM_207362 C2orf55 link to infopage 0.795680 3.674129e-24 6.366163e-20 1.872401e-21
35 8098782 7950032 NM_002007 FGF4 link to infopage 0.795610 3.732447e-24 6.467210e-20 1.847774e-21
36 8098782 8153862 NM_001024678 LRRC24 link to infopage 0.795130 4.156190e-24 7.201431e-20 2.000397e-21
37 8098782 8030181 NM_033378 CGB2 link to infopage 0.795099 4.185926e-24 7.252953e-20 1.960258e-21
38 8098782 8024995 NM_004558 NRTN link to infopage 0.794975 4.302951e-24 7.455723e-20 1.962032e-21
39 8098782 8137707 hsa-mir-339 link to infopage 0.794645 4.632300e-24 8.026386e-20 2.058048e-21
40 8098782 8032034 NM_001136263 C2CD4C link to infopage 0.794257 5.051282e-24 8.752356e-20 2.188089e-21
41 8098782 7899071 ENST00000384508 link to infopage 0.793825 5.561146e-24 9.635797e-20 2.350194e-21
42 8098782 8072941 NM_003614 GALR3 link to infopage 0.792770 7.026667e-24 1.217511e-19 2.898835e-21
43 8098782 7992460 NM_001099456 NPW link to infopage 0.792573 7.338626e-24 1.271564e-19 2.957125e-21
44 8098782 7933075 NM_031866 FZD8 link to infopage 0.791761 8.776953e-24 1.520783e-19 3.456324e-21
45 8098782 8029530 NM_000041 APOE link to infopage 0.791624 9.044957e-24 1.567220e-19 3.482710e-21
46 8098782 8074131 NM_001080420 SHANK3 link to infopage 0.791494 9.305810e-24 1.612418e-19 3.505256e-21
47 8098782 7911435 NM_001014980 FAM132A link to infopage 0.791356 9.592828e-24 1.662149e-19 3.536488e-21
48 8098782 7900001 NM_178548 TFAP2E link to infopage 0.791004 1.036190e-23 1.795406e-19 3.740430e-21
49 8098782 7914361 NM_001856 COL16A1 link to infopage 0.790885 1.063442e-23 1.842627e-19 3.760463e-21
50 8098782 8052018 NM_022055 KCNK12 link to infopage 0.790565 1.140584e-23 1.976290e-19 3.952580e-21

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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