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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7051 8053842 NM_207328 GPAT2 link to infopage glycerol-3-phosphate acyltransferase 2, mitochondrial

Fetching correlation data, please wait...
Getting list of correlations for id 7051.
Getting list of p-values for id 7051.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.134 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8053842 8018379 NM_020753 CASKIN2 link to infopage 0.775386 2.753357e-22 4.770741e-18 4.770741e-18
2 8053842 8067409 NM_005560 LAMA5 link to infopage 0.765392 1.962044e-21 3.399634e-17 1.699817e-17
3 8053842 8001014 NM_173502 PRSS36 link to infopage 0.758933 6.632516e-21 1.149216e-16 3.830720e-17
4 8053842 7912250 EF592573 MIR34A link to infopage 0.758647 6.994308e-21 1.211904e-16 3.029759e-17
5 8053842 7937560 NM_002457 MUC2 link to infopage 0.758026 7.846383e-21 1.359543e-16 2.719086e-17
6 8053842 7929932 NM_030929 KAZALD1 link to infopage 0.756309 1.076224e-20 1.864774e-16 3.107956e-17
7 8053842 8072436 NM_001002837 INPP5J link to infopage 0.754071 1.618494e-20 2.804365e-16 4.006235e-17
8 8053842 8035254 NM_031941 USHBP1 link to infopage 0.752462 2.164519e-20 3.750462e-16 4.688077e-17
9 8053842 8110237 NM_133369 UNC5A link to infopage 0.747163 5.550126e-20 9.616703e-16 1.068523e-16
10 8053842 7922590 AK125993 NCRNA00083 link to infopage 0.746814 5.900802e-20 1.022432e-15 1.022432e-16
11 8053842 7952752 NM_007037 ADAMTS8 link to infopage 0.746431 6.309950e-20 1.093325e-15 9.939318e-17
12 8053842 8076007 NM_025045 BAIAP2L2 link to infopage 0.746267 6.493362e-20 1.125105e-15 9.375874e-17
13 8053842 8038109 NM_017708 FAM83E link to infopage 0.746181 6.591902e-20 1.142179e-15 8.785992e-17
14 8053842 8153101 NM_152888 COL22A1 link to infopage 0.743441 1.060675e-19 1.837832e-15 1.312737e-16
15 8053842 8074131 NM_001080420 SHANK3 link to infopage 0.741635 1.446393e-19 2.506165e-15 1.670777e-16
16 8053842 7990928 ENST00000342039 link to infopage 0.741229 1.550301e-19 2.686206e-15 1.678879e-16
17 8053842 7985459 ENST00000342039 link to infopage 0.741229 1.550301e-19 2.686206e-15 1.580121e-16
18 8053842 7985418 ENST00000342039 link to infopage 0.741229 1.550301e-19 2.686206e-15 1.492337e-16
19 8053842 8159670 NM_006647 NOXA1 link to infopage 0.738441 2.487923e-19 4.310824e-15 2.268855e-16
20 8053842 8019578 NM_030967 KRTAP1-1 link to infopage 0.736425 3.489401e-19 6.046084e-15 3.023042e-16
21 8053842 8015196 NM_030967 KRTAP1-1 link to infopage 0.736425 3.489401e-19 6.046084e-15 2.879088e-16
22 8053842 7991893 BC016613 C16orf11 link to infopage 0.736277 3.576788e-19 6.197500e-15 2.817046e-16
23 8053842 7911799 NM_001409 MEGF6 link to infopage 0.735752 3.903739e-19 6.764009e-15 2.940873e-16
24 8053842 8155942 NM_001013735 FOXB2 link to infopage 0.735692 3.942968e-19 6.831981e-15 2.846659e-16
25 8053842 7978093 NM_032452 JPH4 link to infopage 0.735042 4.393157e-19 7.612023e-15 3.044809e-16
26 8053842 7992758 NM_172229 KREMEN2 link to infopage 0.734911 4.490040e-19 7.779892e-15 2.992266e-16
27 8053842 7998136 NM_022450 RHBDF1 link to infopage 0.734790 4.580922e-19 7.937363e-15 2.939764e-16
28 8053842 7913450 NM_005529 HSPG2 link to infopage 0.734370 4.910866e-19 8.509058e-15 3.038949e-16
29 8053842 8157818 NM_001045476 WDR38 link to infopage 0.733833 5.366460e-19 9.298465e-15 3.206367e-16
30 8053842 8030582 NM_001145809 MYH14 link to infopage 0.731747 7.560666e-19 1.310037e-14 4.366789e-16
31 8053842 8027556 NM_002333 LRP3 link to infopage 0.730794 8.833597e-19 1.530597e-14 4.937411e-16
32 8053842 8009951 NM_000213 ITGB4 link to infopage 0.730494 9.275840e-19 1.607225e-14 5.022578e-16
33 8053842 8131056 NM_017781 CYP2W1 link to infopage 0.730463 9.322493e-19 1.615308e-14 4.894874e-16
34 8053842 8024605 NM_021938 CELF5 link to infopage 0.730218 9.701243e-19 1.680934e-14 4.943924e-16
35 8053842 7991313 NM_002666 PLIN1 link to infopage 0.729185 1.146942e-18 1.987307e-14 5.678021e-16
36 8053842 8082928 NM_001002026 CLDN18 link to infopage 0.728524 1.276175e-18 2.211229e-14 6.142303e-16
37 8053842 8008511 NM_175575 WFIKKN2 link to infopage 0.728375 1.307188e-18 2.264965e-14 6.121528e-16
38 8053842 8039362 NM_178837 C19orf51 link to infopage 0.727855 1.421253e-18 2.462606e-14 6.480541e-16
39 8053842 8071489 NM_005446 P2RX6 link to infopage 0.727782 1.438103e-18 2.491801e-14 6.389234e-16
40 8053842 7925972 NM_005185 CALML3 link to infopage 0.727674 1.463116e-18 2.535140e-14 6.337851e-16
41 8053842 8068496 NM_009586 SIM2 link to infopage 0.727639 1.471352e-18 2.549411e-14 6.218075e-16
42 8053842 8033487 NM_032447 FBN3 link to infopage 0.727064 1.613591e-18 2.795869e-14 6.656830e-16
43 8053842 8004842 NM_173728 ARHGEF15 link to infopage 0.726875 1.663058e-18 2.881580e-14 6.701349e-16
44 8053842 7897196 NM_152492 CCDC27 link to infopage 0.726631 1.729445e-18 2.996610e-14 6.810478e-16
45 8053842 8041582 NM_138370 PKDCC link to infopage 0.726514 1.762177e-18 3.053324e-14 6.785164e-16
46 8053842 8133372 NM_000501 ELN link to infopage 0.726260 1.834852e-18 3.179248e-14 6.911408e-16
47 8053842 8137151 NM_198455 SSPO link to infopage 0.725556 2.052881e-18 3.557028e-14 7.568144e-16
48 8053842 8010113 NM_144677 MGAT5B link to infopage 0.725270 2.148383e-18 3.722503e-14 7.755215e-16
49 8053842 7920744 NM_000298 PKLR link to infopage 0.725160 2.186184e-18 3.788000e-14 7.730613e-16
50 8053842 7899528 NM_000911 OPRD1 link to infopage 0.724125 2.575856e-18 4.463186e-14 8.926371e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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