[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7011 8045604 NM_018328 MBD5 link to infopage methyl-CpG binding domain protein 5

Fetching correlation data, please wait...
Getting list of correlations for id 7011.
Getting list of p-values for id 7011.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.146 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8045604 8045425 NM_015361 R3HDM1 link to infopage 0.686806 6.044495e-16 1.047330e-11 1.047330e-11
2 8045604 7957613 NM_017599 VEZT link to infopage 0.670213 5.309777e-15 9.200251e-11 4.600126e-11
3 8045604 8129193 NM_001042475 C6orf204 link to infopage 0.668778 6.366261e-15 1.103082e-10 3.676940e-11
4 8045604 7926565 NM_004641 MLLT10 link to infopage 0.663572 1.219077e-14 2.112294e-10 5.280736e-11
5 8045604 8136293 NM_021807 EXOC4 link to infopage 0.658002 2.408902e-14 4.173904e-10 8.347808e-11
6 8045604 7915408 NM_014947 FOXJ3 link to infopage 0.657287 2.626228e-14 4.550466e-10 7.584109e-11
7 8045604 8167652 AY730278 CENPVL1 link to infopage -0.655567 3.229627e-14 5.595974e-10 7.994248e-11
8 8045604 8172715 AY730278 CENPVL1 link to infopage -0.655567 3.229627e-14 5.595974e-10 6.994967e-11
9 8045604 8144528 NM_003747 TNKS link to infopage 0.655531 3.243597e-14 5.620181e-10 6.244645e-11
10 8045604 8066303 NM_032221 CHD6 link to infopage 0.654363 3.730249e-14 6.463402e-10 6.463402e-11
11 8045604 8050367 NM_015909 NBAS link to infopage 0.650901 5.623196e-14 9.743312e-10 8.857556e-11
12 8045604 8094501 NM_020860 STIM2 link to infopage 0.649068 6.973529e-14 1.208303e-9 1.006919e-10
13 8045604 7971246 NM_015058 KIAA0564 link to infopage 0.649059 6.980393e-14 1.209493e-9 9.303790e-11
14 8045604 8014551 NM_007247 SYNRG link to infopage 0.648068 7.836982e-14 1.357914e-9 9.699385e-11
15 8045604 8034940 NM_000435 NOTCH3 link to infopage -0.647793 8.091825e-14 1.402071e-9 9.347137e-11
16 8045604 8092035 NM_024947 PHC3 link to infopage 0.644904 1.130754e-13 1.959257e-9 1.224535e-10
17 8045604 7909545 NM_145759 TRAF5 link to infopage 0.640504 1.869593e-13 3.239444e-9 1.905555e-10
18 8045604 8074384 NM_005315 GSC2 link to infopage -0.636706 2.867157e-13 4.967922e-9 2.759957e-10
19 8045604 7910752 NM_000254 MTR link to infopage 0.636552 2.916939e-13 5.054181e-9 2.660095e-10
20 8045604 8148674 NM_139021 MAPK15 link to infopage -0.634009 3.870294e-13 6.706058e-9 3.353029e-10
21 8045604 7987981 NM_174916 UBR1 link to infopage 0.632957 4.347350e-13 7.532654e-9 3.586978e-10
22 8045604 8162313 NM_013417 IARS link to infopage 0.632775 4.435293e-13 7.685031e-9 3.493196e-10
23 8045604 8018935 link to infopage 0.630193 5.888091e-13 1.020230e-8 4.435781e-10
24 8045604 7979551 NM_006246 PPP2R5E link to infopage 0.630135 5.925338e-13 1.026683e-8 4.277847e-10
25 8045604 8114083 NM_014423 AFF4 link to infopage 0.629882 6.091155e-13 1.055414e-8 4.221658e-10
26 8045604 8023133 NM_004671 PIAS2 link to infopage 0.629756 6.175110e-13 1.069961e-8 4.115236e-10
27 8045604 7976200 NM_006888 CALM1 link to infopage 0.629666 6.235887e-13 1.080492e-8 4.001822e-10
28 8045604 8099860 NM_002913 RFC1 link to infopage 0.629466 6.373362e-13 1.104313e-8 3.943973e-10
29 8045604 7956908 ENST00000458887 link to infopage 0.629015 6.693770e-13 1.159830e-8 3.999412e-10
30 8045604 7942650 NM_020193 C11orf30 link to infopage 0.628664 6.954147e-13 1.204945e-8 4.016484e-10
31 8045604 8136614 NM_018238 AGK link to infopage 0.628463 7.107709e-13 1.231553e-8 3.972751e-10
32 8045604 8166230 NM_018360 TXLNG link to infopage 0.627756 7.673404e-13 1.329571e-8 4.154909e-10
33 8045604 7982957 NM_001080541 MGA link to infopage 0.627063 8.270836e-13 1.433088e-8 4.342690e-10
34 8045604 8063242 NM_006420 ARFGEF2 link to infopage 0.626749 8.556016e-13 1.482501e-8 4.360297e-10
35 8045604 8092095 NM_015028 TNIK link to infopage 0.626631 8.665293e-13 1.501435e-8 4.289815e-10
36 8045604 8150287 NM_023034 WHSC1L1 link to infopage 0.625204 1.010195e-12 1.750365e-8 4.862125e-10
37 8045604 8006850 NM_016507 CDK12 link to infopage 0.625108 1.020663e-12 1.768503e-8 4.779739e-10
38 8045604 7930524 NM_145206 VTI1A link to infopage 0.624022 1.146466e-12 1.986482e-8 5.227584e-10
39 8045604 8142912 NM_032842 TMEM209 link to infopage 0.623584 1.201256e-12 2.081417e-8 5.336966e-10
40 8045604 8113083 NM_032042 FAM172A link to infopage 0.621608 1.481967e-12 2.567804e-8 6.419509e-10
41 8045604 8020630 NM_153211 TTC39C link to infopage 0.621020 1.577010e-12 2.732485e-8 6.664597e-10
42 8045604 8036676 NM_024907 FBXO17 link to infopage -0.620702 1.630814e-12 2.825711e-8 6.727884e-10
43 8045604 8040265 NM_002236 KCNF1 link to infopage -0.620531 1.660506e-12 2.877158e-8 6.691066e-10
44 8045604 8068902 NM_015056 RRP1B link to infopage 0.620251 1.710399e-12 2.963608e-8 6.735472e-10
45 8045604 7905020 NM_000798 DRD5 link to infopage -0.619531 1.844916e-12 3.196686e-8 7.103746e-10
46 8045604 8111286 NM_013235 RNASEN link to infopage 0.619383 1.873905e-12 3.246915e-8 7.058511e-10
47 8045604 8041179 NM_024692 CLIP4 link to infopage 0.618437 2.069326e-12 3.585521e-8 7.628769e-10
48 8045604 7905339 NM_144618 GABPB2 link to infopage 0.618282 2.103040e-12 3.643938e-8 7.591537e-10
49 8045604 7972487 NM_015296 DOCK9 link to infopage 0.617599 2.258700e-12 3.913649e-8 7.987039e-10
50 8045604 7932160 BC072452 FAM107B link to infopage 0.617384 2.309936e-12 4.002427e-8 8.004854e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!