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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
3312 7995525 NM_033119 NKD1 link to infopage naked cuticle homolog 1 (Drosophila)

Fetching correlation data, please wait...
Getting list of correlations for id 3312.
Getting list of p-values for id 3312.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.161 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7995525 8007259 ENST00000225928 link to infopage 0.799089 1.696008e-24 2.938672e-20 2.938672e-20
2 7995525 8033825 NM_015719 COL5A3 link to infopage 0.752289 2.232787e-20 3.868751e-16 1.934375e-16
3 7995525 8076747 AK123383 LOC642648 link to infopage 0.748723 4.216780e-20 7.306415e-16 2.435472e-16
4 7995525 7994961 NM_001330 CTF1 link to infopage 0.743816 9.941291e-20 1.722527e-15 4.306319e-16
5 7995525 7914361 NM_001856 COL16A1 link to infopage 0.740138 1.866822e-19 3.234643e-15 6.469285e-16
6 7995525 7981447 NM_001100119 XRCC3 link to infopage 0.736543 3.421488e-19 5.928412e-15 9.880687e-16
7 7995525 7960894 NR_024420 LOC389634 link to infopage 0.736173 3.639604e-19 6.306342e-15 9.009060e-16
8 7995525 8157383 NM_032888 COL27A1 link to infopage 0.732486 6.699004e-19 1.160736e-14 1.450920e-15
9 7995525 7945536 NM_016564 CEND1 link to infopage 0.730448 9.344794e-19 1.619173e-14 1.799081e-15
10 7995525 7940377 NM_017870 TMEM132A link to infopage 0.728757 1.229071e-18 2.129611e-14 2.129611e-15
11 7995525 8159808 NM_207305 FOXD4 link to infopage 0.725584 2.043721e-18 3.541156e-14 3.219233e-15
12 7995525 8005328 NM_016239 MYO15A link to infopage 0.723947 2.649544e-18 4.590865e-14 3.825721e-15
13 7995525 7900931 NM_003780 B4GALT2 link to infopage 0.723005 3.074019e-18 5.326353e-14 4.097195e-15
14 7995525 7992191 NM_012217 TPSD1 link to infopage 0.722123 3.530529e-18 6.117347e-14 4.369534e-15
15 7995525 8067506 BC137326 C20orf151 link to infopage 0.719307 5.475010e-18 9.486550e-14 6.324366e-15
16 7995525 8005726 NM_021012 KCNJ12 link to infopage 0.717634 7.087420e-18 1.228037e-13 7.675233e-15
17 7995525 8145555 NM_016240 SCARA3 link to infopage 0.717212 7.562244e-18 1.310310e-13 7.707706e-15
18 7995525 7949015 NM_001144936 C11orf95 link to infopage 0.715274 1.016939e-17 1.762050e-13 9.789164e-15
19 7995525 8104592 NM_012304 FBXL7 link to infopage 0.714950 1.068392e-17 1.851202e-13 9.743169e-15
20 7995525 7988987 NM_004498 ONECUT1 link to infopage 0.713674 1.296329e-17 2.246150e-13 1.123075e-14
21 7995525 8024048 NM_002777 PRTN3 link to infopage 0.712972 1.441286e-17 2.497317e-13 1.189198e-14
22 7995525 8037614 NM_005282 GPR4 link to infopage 0.710596 2.058043e-17 3.565971e-13 1.620896e-14
23 7995525 8067409 NM_005560 LAMA5 link to infopage 0.709645 2.371292e-17 4.108737e-13 1.786408e-14
24 7995525 8170753 NM_014370 SRPK3 link to infopage 0.709238 2.518963e-17 4.364607e-13 1.818586e-14
25 7995525 8086985 NM_000094 COL7A1 link to infopage 0.708644 2.750606e-17 4.765976e-13 1.906390e-14
26 7995525 8131056 NM_017781 CYP2W1 link to infopage 0.708597 2.769557e-17 4.798812e-13 1.845697e-14
27 7995525 8069208 NM_030582 COL18A1 link to infopage 0.708532 2.796560e-17 4.845600e-13 1.794667e-14
28 7995525 7998668 NM_144603 NOXO1 link to infopage 0.706853 3.581832e-17 6.206241e-13 2.216515e-14
29 7995525 8098740 NM_033178 DUX4 link to infopage 0.706698 3.664015e-17 6.348639e-13 2.189186e-14
30 7995525 8098732 NM_033178 DUX4 link to infopage 0.706324 3.870888e-17 6.707088e-13 2.235696e-14
31 7995525 7992197 ENST00000429194 link to infopage 0.705677 4.255053e-17 7.372730e-13 2.378300e-14
32 7995525 8006865 NM_032192 PPP1R1B link to infopage 0.705608 4.298471e-17 7.447961e-13 2.327488e-14
33 7995525 8176149 NM_139250 CTAG1A link to infopage 0.704409 5.119081e-17 8.869832e-13 2.687828e-14
34 7995525 8170965 NM_139250 CTAG1A link to infopage 0.704409 5.119081e-17 8.869832e-13 2.608774e-14
35 7995525 7933501 NM_001080520 DRGX link to infopage 0.704077 5.371917e-17 9.307921e-13 2.659406e-14
36 7995525 8044634 NM_012184 FOXD4L1 link to infopage 0.703580 5.773453e-17 1.000366e-12 2.778795e-14
37 7995525 8119466 NM_005586 MDFI link to infopage 0.703468 5.867764e-17 1.016707e-12 2.747858e-14
38 7995525 8153790 NM_013432 NFKBIL2 link to infopage 0.702247 6.999581e-17 1.212817e-12 3.191625e-14
39 7995525 7991088 NR_027001 LOC388152 link to infopage 0.701558 7.729352e-17 1.339265e-12 3.434012e-14
40 7995525 7998878 NM_022119 PRSS22 link to infopage 0.700741 8.690590e-17 1.505819e-12 3.764546e-14
41 7995525 8133372 NM_000501 ELN link to infopage 0.700710 8.729009e-17 1.512475e-12 3.688965e-14
42 7995525 7985431 NR_026811 LOC80154 link to infopage 0.700103 9.520677e-17 1.649648e-12 3.927733e-14
43 7995525 8035646 NM_023002 HAPLN4 link to infopage 0.700069 9.566111e-17 1.657520e-12 3.854698e-14
44 7995525 8073623 NM_001044370 MPPED1 link to infopage 0.699837 9.888722e-17 1.713419e-12 3.894134e-14
45 7995525 8075934 NM_014550 CARD10 link to infopage 0.699790 9.955119e-17 1.724924e-12 3.833163e-14
46 7995525 8031962 NM_017908 ZNF446 link to infopage 0.699735 1.003273e-16 1.738372e-12 3.779069e-14
47 7995525 8032088 NM_214710 PRSSL1 link to infopage 0.699695 1.009058e-16 1.748395e-12 3.719989e-14
48 7995525 8001014 NM_173502 PRSS36 link to infopage 0.699273 1.071608e-16 1.856775e-12 3.868281e-14
49 7995525 8104122 NM_033178 DUX4 link to infopage 0.698742 1.155632e-16 2.002363e-12 4.086455e-14
50 7995525 7998399 ENST00000419882 link to infopage 0.698661 1.169062e-16 2.025634e-12 4.051269e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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