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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 6 variables:
id Label1 AccNum GeneSym Info Gene Name
7459 7919407 NM_001143883 PPIAL4B link to infopage peptidylprolyl isomerase A (cyclophilin A)-like 4B
10147 7905051 NM_001143883 PPIAL4B link to infopage peptidylprolyl isomerase A (cyclophilin A)-like 4B
10148 7919162 NM_001143883 PPIAL4B link to infopage peptidylprolyl isomerase A (cyclophilin A)-like 4B
12547 7919157 NM_001143883 PPIAL4B link to infopage peptidylprolyl isomerase A (cyclophilin A)-like 4B
14562 7904997 NM_001143883 PPIAL4B link to infopage peptidylprolyl isomerase A (cyclophilin A)-like 4B
14563 7905016 NM_001143883 PPIAL4B link to infopage peptidylprolyl isomerase A (cyclophilin A)-like 4B

Fetching correlation data, please wait...
Getting list of correlations for id 7459.
Getting list of p-values for id 7459.
1 of 6 done.
Getting list of correlations for id 10147.
Getting list of p-values for id 10147.
2 of 6 done.
Getting list of correlations for id 10148.
Getting list of p-values for id 10148.
3 of 6 done.
Getting list of correlations for id 12547.
Getting list of p-values for id 12547.
4 of 6 done.
Getting list of correlations for id 14562.
Getting list of p-values for id 14562.
5 of 6 done.
Getting list of correlations for id 14563.
Getting list of p-values for id 14563.
6 of 6 done.
Calculating corrections for multiple testing (n=103962), please wait...
Done; whole program took 0.636 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7905051 7919162 NM_001143883 PPIAL4B link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 7904997 7905016 NM_001143883 PPIAL4B link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 7919162 7905051 NM_001143883 PPIAL4B link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
4 7905016 7904997 NM_001143883 PPIAL4B link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
5 7919407 7919162 NM_001143883 PPIAL4B link to infopage 0.979874 6.659767e-74 6.923627e-69 1.384725e-69
6 7919407 7905051 NM_001143883 PPIAL4B link to infopage 0.979874 6.659767e-74 6.923627e-69 1.153938e-69
7 7919162 7919407 NM_001143883 PPIAL4B link to infopage 0.979874 6.659767e-74 6.923627e-69 9.890895e-70
8 7905051 7919407 NM_001143883 PPIAL4B link to infopage 0.979874 6.659767e-74 6.923627e-69 8.654533e-70
9 7919157 7919162 NM_001143883 PPIAL4B link to infopage 0.940069 6.202635e-50 6.448383e-45 7.164871e-46
10 7919157 7905051 NM_001143883 PPIAL4B link to infopage 0.940069 6.202635e-50 6.448383e-45 6.448383e-46
11 7919162 7919157 NM_001143883 PPIAL4B link to infopage 0.940069 6.202635e-50 6.448383e-45 5.862167e-46
12 7905051 7919157 NM_001143883 PPIAL4B link to infopage 0.940069 6.202635e-50 6.448383e-45 5.373653e-46
13 7919157 7919407 NM_001143883 PPIAL4B link to infopage 0.931971 3.445425e-47 3.581933e-42 2.755333e-43
14 7919407 7919157 NM_001143883 PPIAL4B link to infopage 0.931971 3.445425e-47 3.581933e-42 2.558523e-43
15 7905016 7919436 NM_178230 PPIAL4A link to infopage 0.919385 1.561365e-43 1.623226e-38 1.082151e-39
16 7904997 7919436 NM_178230 PPIAL4A link to infopage 0.919385 1.561365e-43 1.623226e-38 1.014516e-39
17 7904997 7919157 NM_001143883 PPIAL4B link to infopage 0.903565 1.055321e-39 1.097133e-34 6.453722e-36
18 7905016 7919157 NM_001143883 PPIAL4B link to infopage 0.903565 1.055321e-39 1.097133e-34 6.095182e-36
19 7919157 7905016 NM_001143883 PPIAL4B link to infopage 0.903565 1.055321e-39 1.097133e-34 5.774382e-36
20 7919157 7904997 NM_001143883 PPIAL4B link to infopage 0.903565 1.055321e-39 1.097133e-34 5.485663e-36
21 7919157 7953878 NM_001004419 CLEC2D link to infopage 0.877347 1.272339e-34 1.322749e-29 6.298805e-31
22 7919157 7980891 NM_001128596 TC2N link to infopage 0.871266 1.309948e-33 1.361848e-28 6.190219e-30
23 7905051 7904997 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 1.029679e-29
24 7904997 7905051 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 9.867761e-30
25 7904997 7919162 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 9.473051e-30
26 7905051 7905016 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 9.108703e-30
27 7919162 7904997 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 8.771343e-30
28 7905016 7905051 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 8.458081e-30
29 7905016 7919162 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 8.166423e-30
30 7919162 7905016 NM_001143883 PPIAL4B link to infopage 0.869776 2.278008e-33 2.368263e-28 7.894209e-30
31 7919157 8107868 NM_020240 CDC42SE2 link to infopage 0.865365 1.126860e-32 1.171507e-27 3.779053e-29
32 7919157 7943620 NM_000051 ATM link to infopage 0.859765 7.921220e-32 8.235059e-27 2.573456e-28
33 7919157 8043697 NM_025190 ANKRD36B link to infopage 0.856405 2.452220e-31 2.549377e-26 7.725384e-28
34 7919157 8084128 NM_133462 TTC14 link to infopage 0.855228 3.618972e-31 3.762356e-26 1.106575e-27
35 7919157 7919436 NM_178230 PPIAL4A link to infopage 0.855069 3.813253e-31 3.964334e-26 1.132667e-27
36 7919407 7905016 NM_001143883 PPIAL4B link to infopage 0.854575 4.484657e-31 4.662339e-26 1.295094e-27
37 7905016 7919407 NM_001143883 PPIAL4B link to infopage 0.854575 4.484657e-31 4.662339e-26 1.260092e-27
38 7904997 7919407 NM_001143883 PPIAL4B link to infopage 0.854575 4.484657e-31 4.662339e-26 1.226931e-27
39 7919407 7904997 NM_001143883 PPIAL4B link to infopage 0.854575 4.484657e-31 4.662339e-26 1.195472e-27
40 7919157 8047097 NM_014905 GLS link to infopage 0.854452 4.668241e-31 4.853196e-26 1.213299e-27
41 7919157 8177560 NM_018429 BDP1 link to infopage 0.854051 5.321755e-31 5.532603e-26 1.349415e-27
42 7919157 8027416 NM_003796 C19orf2 link to infopage 0.853791 5.792160e-31 6.021645e-26 1.433725e-27
43 7919157 8106025 NM_018429 BDP1 link to infopage 0.853712 5.943951e-31 6.179450e-26 1.437081e-27
44 7919157 7902594 NM_182948 PRKACB link to infopage 0.852429 9.005408e-31 9.362202e-26 2.127773e-27
45 7919157 8101340 NR_003249 HNRPDL link to infopage 0.849850 2.051753e-30 2.133043e-25 4.740096e-27
46 7919157 8145136 NM_005605 PPP3CC link to infopage 0.847790 3.917841e-30 4.073066e-25 8.854490e-27
47 7919157 8102171 NM_033115 TBCK link to infopage 0.847474 4.322506e-30 4.493763e-25 9.561199e-27
48 7919157 8113157 NM_014639 TTC37 link to infopage 0.846007 6.803829e-30 7.073396e-25 1.473624e-26
49 7919157 8168531 NM_032553 GPR174 link to infopage 0.845109 8.961274e-30 9.316319e-25 1.901290e-26
50 7919157 8039947 NM_006625 SRSF10 link to infopage 0.843348 1.530239e-29 1.590867e-24 3.181734e-26

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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