[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 12 variables:
id Label1 AccNum GeneSym Info Gene Name
15337 7999841 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
16561 8000651 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
16652 7993999 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
16653 8000222 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
16720 8000687 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
16876 8000167 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
16975 8000834 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
16990 8002333 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
17073 8000823 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
17094 8000638 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
17109 7994006 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
17200 8000217 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)

Fetching correlation data, please wait...
Getting list of correlations for id 15337.
Getting list of p-values for id 15337.
1 of 12 done.
Getting list of correlations for id 16561.
Getting list of p-values for id 16561.
2 of 12 done.
Getting list of correlations for id 16652.
Getting list of p-values for id 16652.
3 of 12 done.
Getting list of correlations for id 16653.
Getting list of p-values for id 16653.
4 of 12 done.
Getting list of correlations for id 16720.
Getting list of p-values for id 16720.
5 of 12 done.
Getting list of correlations for id 16876.
Getting list of p-values for id 16876.
6 of 12 done.
Getting list of correlations for id 16975.
Getting list of p-values for id 16975.
7 of 12 done.
Getting list of correlations for id 16990.
Getting list of p-values for id 16990.
8 of 12 done.
Getting list of correlations for id 17073.
Getting list of p-values for id 17073.
9 of 12 done.
Getting list of correlations for id 17094.
Getting list of p-values for id 17094.
10 of 12 done.
Getting list of correlations for id 17109.
Getting list of p-values for id 17109.
11 of 12 done.
Getting list of correlations for id 17200.
Getting list of p-values for id 17200.
12 of 12 done.
Calculating corrections for multiple testing (n=207924), please wait...
Done; whole program took 1.664 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8000222 7993999 NM_015092 SMG1 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 7993999 8000222 NM_015092 SMG1 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8000651 8000834 NM_015092 SMG1 link to infopage 0.996376 4.564324e-112 9.490324e-107 3.163441e-107
4 8000834 8000651 NM_015092 SMG1 link to infopage 0.996376 4.564324e-112 9.490324e-107 2.372581e-107
5 8000823 8000638 NM_015092 SMG1 link to infopage 0.994982 8.313147e-105 1.728503e-99 3.457006e-100
6 8000638 8000823 NM_015092 SMG1 link to infopage 0.994982 8.313147e-105 1.728503e-99 2.880838e-100
7 7994006 8000156 ENST00000446231 link to infopage 0.991320 1.376171e-92 2.861390e-87 4.087700e-88
8 7994006 8000217 NM_015092 SMG1 link to infopage 0.990211 6.539637e-90 1.359748e-84 1.699684e-85
9 8000217 7994006 NM_015092 SMG1 link to infopage 0.990211 6.539637e-90 1.359748e-84 1.510831e-85
10 8002333 8000156 ENST00000446231 link to infopage 0.985692 1.801583e-81 3.745923e-76 3.745923e-77
11 8000823 8002333 NM_015092 SMG1 link to infopage 0.985517 3.348470e-81 6.962274e-76 6.329340e-77
12 8002333 8000823 NM_015092 SMG1 link to infopage 0.985517 3.348470e-81 6.962274e-76 5.801895e-77
13 8002333 8000638 NM_015092 SMG1 link to infopage 0.984509 1.047242e-79 2.177468e-74 1.674975e-75
14 8000638 8002333 NM_015092 SMG1 link to infopage 0.984509 1.047242e-79 2.177468e-74 1.555334e-75
15 8002333 7994006 NM_015092 SMG1 link to infopage 0.984213 2.753078e-79 5.724309e-74 3.816206e-75
16 7994006 8002333 NM_015092 SMG1 link to infopage 0.984213 2.753078e-79 5.724309e-74 3.577693e-75
17 8000651 8000167 NM_015092 SMG1 link to infopage 0.982843 1.933052e-77 4.019278e-72 2.364281e-73
18 8000167 8000651 NM_015092 SMG1 link to infopage 0.982843 1.933052e-77 4.019278e-72 2.232932e-73
19 8000167 8000834 NM_015092 SMG1 link to infopage 0.980079 3.952569e-74 8.218340e-69 4.325442e-70
20 8000834 8000167 NM_015092 SMG1 link to infopage 0.980079 3.952569e-74 8.218340e-69 4.109170e-70
21 8000638 8000156 ENST00000446231 link to infopage 0.979978 5.110811e-74 1.062660e-68 5.060287e-70
22 8000638 7994006 NM_015092 SMG1 link to infopage 0.979489 1.749420e-73 3.637465e-68 1.653393e-69
23 7994006 8000638 NM_015092 SMG1 link to infopage 0.979489 1.749420e-73 3.637465e-68 1.581506e-69
24 8000823 8000156 ENST00000446231 link to infopage 0.979016 5.595514e-73 1.163442e-67 4.847673e-69
25 7994006 8000167 NM_015092 SMG1 link to infopage 0.978824 8.895536e-73 1.849595e-67 7.398382e-69
26 8000167 7994006 NM_015092 SMG1 link to infopage 0.978824 8.895536e-73 1.849595e-67 7.113829e-69
27 7994006 8000651 NM_015092 SMG1 link to infopage 0.978507 1.900098e-72 3.950760e-67 1.463244e-68
28 8000651 7994006 NM_015092 SMG1 link to infopage 0.978507 1.900098e-72 3.950760e-67 1.410986e-68
29 8000167 8000222 NM_015092 SMG1 link to infopage 0.978127 4.633421e-72 9.633994e-67 3.322067e-68
30 8000167 7993999 NM_015092 SMG1 link to infopage 0.978127 4.633421e-72 9.633994e-67 3.211331e-68
31 7993999 8000167 NM_015092 SMG1 link to infopage 0.978127 4.633421e-72 9.633994e-67 3.107740e-68
32 8000222 8000167 NM_015092 SMG1 link to infopage 0.978127 4.633421e-72 9.633994e-67 3.010623e-68
33 8000217 8000167 NM_015092 SMG1 link to infopage 0.977078 5.036633e-71 1.047237e-65 3.173445e-67
34 8000167 8000217 NM_015092 SMG1 link to infopage 0.977078 5.036633e-71 1.047237e-65 3.080108e-67
35 7994006 8000834 NM_015092 SMG1 link to infopage 0.976729 1.088582e-70 2.263423e-65 6.466924e-67
36 8000834 7994006 NM_015092 SMG1 link to infopage 0.976729 1.088582e-70 2.263423e-65 6.287287e-67
37 7994006 8000823 NM_015092 SMG1 link to infopage 0.976130 3.969352e-70 8.253235e-65 2.230604e-66
38 8000823 7994006 NM_015092 SMG1 link to infopage 0.976130 3.969352e-70 8.253235e-65 2.171904e-66
39 8002333 8000651 NM_015092 SMG1 link to infopage 0.972403 6.350862e-67 1.320497e-61 3.385889e-63
40 8000651 8002333 NM_015092 SMG1 link to infopage 0.972403 6.350862e-67 1.320497e-61 3.301242e-63
41 8002333 8000834 NM_015092 SMG1 link to infopage 0.971478 3.392883e-66 7.054618e-61 1.720638e-62
42 8000834 8002333 NM_015092 SMG1 link to infopage 0.971478 3.392883e-66 7.054618e-61 1.679671e-62
43 8000651 8000217 NM_015092 SMG1 link to infopage 0.970924 9.003818e-66 1.872110e-60 4.353744e-62
44 8000217 8000651 NM_015092 SMG1 link to infopage 0.970924 9.003818e-66 1.872110e-60 4.254795e-62
45 8000651 8000156 ENST00000446231 link to infopage 0.970289 2.696395e-65 5.606453e-60 1.245878e-61
46 8000834 8000217 NM_015092 SMG1 link to infopage 0.970130 3.533666e-65 7.347339e-60 1.597248e-61
47 8000217 8000834 NM_015092 SMG1 link to infopage 0.970130 3.533666e-65 7.347339e-60 1.563264e-61
48 8000217 8000156 ENST00000446231 link to infopage 0.969005 2.307630e-64 4.798116e-59 9.996075e-61
49 8002333 8000217 NM_015092 SMG1 link to infopage 0.968457 5.610426e-64 1.166542e-58 2.380698e-60
50 8000217 8002333 NM_015092 SMG1 link to infopage 0.968457 5.610426e-64 1.166542e-58 2.333084e-60

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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