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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 16652.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
16652 7993999 NM_015092 SMG1 link to infopage SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)

Fetching correlation data, please wait...
Getting list of correlations for id 16652.
Getting list of p-values for id 16652.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.102 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7993999 8000222 NM_015092 SMG1 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 7993999 8000167 NM_015092 SMG1 link to infopage 0.978127 4.633421e-72 8.028328e-68 4.014164e-68
3 7993999 8000651 NM_015092 SMG1 link to infopage 0.963263 1.262899e-60 2.188225e-56 7.294082e-57
4 7993999 8000834 NM_015092 SMG1 link to infopage 0.958972 3.353968e-58 5.811420e-54 1.452855e-54
5 7993999 7994006 NM_015092 SMG1 link to infopage 0.954058 1.003693e-55 1.739100e-51 3.478199e-52
6 7993999 8000156 ENST00000446231 link to infopage 0.945259 6.668215e-52 1.155402e-47 1.925669e-48
7 7993999 8000217 NM_015092 SMG1 link to infopage 0.942829 5.865590e-51 1.016331e-46 1.451901e-47
8 7993999 8002333 NM_015092 SMG1 link to infopage 0.933045 1.560844e-47 2.704474e-43 3.380592e-44
9 7993999 8000638 NM_015092 SMG1 link to infopage 0.922676 1.985712e-44 3.440643e-40 3.822937e-41
10 7993999 8000823 NM_015092 SMG1 link to infopage 0.917118 6.143276e-43 1.064445e-38 1.064445e-39
11 7993999 8000692 NM_001031827 BOLA2 link to infopage 0.898803 1.115972e-38 1.933645e-34 1.757860e-35
12 7993999 7929201 NM_003972 BTAF1 link to infopage 0.886597 2.859416e-36 4.954510e-32 4.128758e-33
13 7993999 8107066 NM_005575 LNPEP link to infopage 0.875788 2.340071e-34 4.054641e-30 3.118954e-31
14 7993999 7972190 NM_022118 RBM26 link to infopage 0.872139 9.440404e-34 1.635739e-29 1.168385e-30
15 7993999 8168316 NM_181672 OGT link to infopage 0.872105 9.561840e-34 1.656780e-29 1.104520e-30
16 7993999 8000687 NM_015092 SMG1 link to infopage 0.871802 1.071682e-33 1.856903e-29 1.160564e-30
17 7993999 8128394 NM_032870 SFRS18 link to infopage 0.864970 1.296659e-32 2.246720e-28 1.321600e-29
18 7993999 7916443 NM_015306 USP24 link to infopage 0.864346 1.617477e-32 2.802603e-28 1.557002e-29
19 7993999 7989387 NM_020821 VPS13C link to infopage 0.863939 1.866934e-32 3.234837e-28 1.702546e-29
20 7993999 8154333 NM_015061 KDM4C link to infopage 0.860023 7.255103e-32 1.257092e-27 6.285458e-29
21 7993999 8133914 NR_024549 DMTF1 link to infopage 0.858443 1.240214e-31 2.148918e-27 1.023294e-28
22 7993999 8000690 ENST00000458775 link to infopage 0.856177 2.645210e-31 4.583355e-27 2.083343e-28
23 7993999 8000649 ENST00000458775 link to infopage 0.856177 2.645210e-31 4.583355e-27 1.992763e-28
24 7993999 8156167 NM_024635 NAA35 link to infopage 0.855448 3.365558e-31 5.831503e-27 2.429793e-28
25 7993999 8054054 NM_025190 ANKRD36B link to infopage 0.853965 5.473315e-31 9.483614e-27 3.793445e-28
26 7993999 8006377 NM_001098507 ZNF207 link to infopage 0.853871 5.643367e-31 9.778262e-27 3.760870e-28
27 7993999 8083445 ENST00000364347 link to infopage 0.852485 8.843389e-31 1.532294e-26 5.675163e-28
28 7993999 8051464 NM_019024 HEATR5B link to infopage 0.852048 1.018088e-30 1.764042e-26 6.300150e-28
29 7993999 7956697 NM_015026 MON2 link to infopage 0.849100 2.599695e-30 4.504491e-26 1.553273e-27
30 7993999 7943620 NM_000051 ATM link to infopage 0.848982 2.698019e-30 4.674858e-26 1.558286e-27
31 7993999 8052443 NM_014709 USP34 link to infopage 0.845926 6.976833e-30 1.208876e-25 3.899599e-27
32 7993999 8000192 ENST00000198767 link to infopage 0.845064 9.085185e-30 1.574190e-25 4.919344e-27
33 7993999 7939434 NM_018259 TTC17 link to infopage 0.844532 1.068857e-29 1.852009e-25 5.612148e-27
34 7993999 8107234 NM_002372 MAN2A1 link to infopage 0.844435 1.100650e-29 1.907096e-25 5.609105e-27
35 7993999 7936826 NM_022466 IKZF5 link to infopage 0.844343 1.132036e-29 1.961478e-25 5.604223e-27
36 7993999 8116664 NM_003913 PRPF4B link to infopage 0.844088 1.223174e-29 2.119394e-25 5.887207e-27
37 7993999 7989806 NM_197960 DPP8 link to infopage 0.843985 1.262052e-29 2.186757e-25 5.910154e-27
38 7993999 7917156 NM_003902 FUBP1 link to infopage 0.843881 1.302391e-29 2.256654e-25 5.938562e-27
39 7993999 8083429 NM_021038 MBNL1 link to infopage 0.842797 1.806900e-29 3.130816e-25 8.027733e-27
40 7993999 7916185 NM_001009881 ZCCHC11 link to infopage 0.841198 2.915161e-29 5.051099e-25 1.262775e-26
41 7993999 7978866 NM_004713 SDCCAG1 link to infopage 0.840739 3.341064e-29 5.789062e-25 1.411966e-26
42 7993999 8057700 NM_016467 ORMDL1 link to infopage 0.840432 3.659283e-29 6.340440e-25 1.509629e-26
43 7993999 8051928 NM_006036 PREPL link to infopage 0.839540 4.759939e-29 8.247546e-25 1.918034e-26
44 7993999 8154394 NM_001039697 SNAPC3 link to infopage 0.839119 5.387362e-29 9.334682e-25 2.121519e-26
45 7993999 8122464 NM_007124 UTRN link to infopage 0.838776 5.956801e-29 1.032135e-24 2.293633e-26
46 7993999 8043697 NM_025190 ANKRD36B link to infopage 0.838612 6.247750e-29 1.082548e-24 2.353364e-26
47 7993999 7925978 NM_017782 C10orf18 link to infopage 0.838355 6.736179e-29 1.167178e-24 2.483357e-26
48 7993999 8114861 NM_020117 LARS link to infopage 0.838293 6.858536e-29 1.188379e-24 2.475789e-26
49 7993999 8051622 NM_001031684 SRSF7 link to infopage 0.837404 8.881306e-29 1.538864e-24 3.140539e-26
50 7993999 8144812 NM_006197 PCM1 link to infopage 0.837313 9.120086e-29 1.580237e-24 3.160475e-26

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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