[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
User requested variable id 3527.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3527	202643_s_at	AI738896	TNFAIP3		tumor necrosis factor, alpha-induced protein 3

Fetching correlation data, please wait...
Getting list of correlations for id 3527.
Getting list of p-values for id 3527.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.110 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202643_s_at	202644_s_at	NM_006290	TNFAIP3	0.668989	3.517809e-12	8.132119e-8	8.132119e-8
2	202643_s_at	212006_at	AU149908	UBXN4	0.643138	4.202436e-11	9.714772e-7	4.857386e-7
3	202643_s_at	1559094_at	AK095307	FBXO9	0.604149	1.169053e-9	2.702501e-5	9.008335e-6
4	202643_s_at	202631_s_at	NM_006380	APPBP2	0.599256	1.719886e-9	3.975859e-5	9.939649e-6
5	202643_s_at	1559096_x_at	AK095307	FBXO9	0.596297	2.165422e-9	5.005807e-5	1.001161e-5
6	202643_s_at	217523_at	AV700298	CD44	0.592358	2.931745e-9	6.777314e-5	1.129552e-5
7	202643_s_at	213649_at	AA524053	SRSF7	0.584895	5.148626e-9	1.190208e-4	1.700297e-5
8	202643_s_at	201009_s_at	AI439556	TXNIP	0.578953	7.980688e-9	1.844896e-4	2.306119e-5
9	202643_s_at	233080_s_at	AF155096	PRPF40A	0.577280	9.014835e-9	2.083959e-4	2.315510e-5
10	202643_s_at	201065_s_at	NM_001518		0.577141	9.105709e-9	2.104967e-4	2.104967e-5
11	202643_s_at	202915_s_at	BF115776	FAM20B	0.576902	9.264937e-9	2.141775e-4	1.947069e-5
12	202643_s_at	212746_s_at	AA126789	CEP170	0.575109	1.054812e-8	2.438410e-4	2.032008e-5
13	202643_s_at	235784_at	N32155		0.573766	1.161748e-8	2.685613e-4	2.065856e-5
14	202643_s_at	237035_at	AI792315		0.572908	1.235425e-8	2.855933e-4	2.039952e-5
15	202643_s_at	225412_at	AA761169	TMEM87B	0.572466	1.275146e-8	2.947754e-4	1.965170e-5
16	202643_s_at	243619_at	R91766	FGFR1OP2	0.570180	1.500464e-8	3.468623e-4	2.167889e-5
17	202643_s_at	227658_s_at	BE550332	PLEKHA3	0.569895	1.531085e-8	3.539409e-4	2.082005e-5
18	202643_s_at	218930_s_at	NM_018374	TMEM106B	0.566195	1.986776e-8	4.592831e-4	2.551573e-5
19	202643_s_at	1565716_at	BE930017	FUS	0.565225	2.126015e-8	4.914709e-4	2.586689e-5
20	202643_s_at	225137_at	BF111111		0.564953	2.166792e-8	5.008973e-4	2.504486e-5
21	202643_s_at	220768_s_at	NM_004384	CSNK1G3	0.564269	2.272417e-8	5.253146e-4	2.501498e-5
22	202643_s_at	243108_at	AW297762	RANBP9	0.558932	3.282894e-8	7.589065e-4	3.449575e-5
23	202643_s_at	233874_at	AK025264	SLAIN2	0.558705	3.334258e-8	7.707805e-4	3.351220e-5
24	202643_s_at	212469_at	AB019494	NIPBL	0.558674	3.341262e-8	7.723995e-4	3.218331e-5
25	202643_s_at	218909_at	NM_012424	RPS6KC1	0.557227	3.687316e-8	8.523969e-4	3.409588e-5
26	202643_s_at	223189_x_at	AW082219	MLL5	0.555262	4.212066e-8	9.737033e-4	3.745013e-5
27	202643_s_at	240941_at	BF222862	ITSN2	0.554127	4.546783e-8	1.051080e-3	3.892888e-5
28	202643_s_at	200767_s_at	NM_014612	FAM120A	0.553881	4.622674e-8	1.068624e-3	3.816513e-5
29	202643_s_at	208945_s_at	NM_003766	BECN1	0.552495	5.072897e-8	1.172702e-3	4.043799e-5
30	202643_s_at	239888_at	AA664350		0.550434	5.819944e-8	1.345396e-3	4.484655e-5
31	202643_s_at	1555790_a_at	BC036301		0.549624	6.141451e-8	1.419719e-3	4.579739e-5
32	202643_s_at	212184_s_at	AL117407	TAB2	0.548512	6.610234e-8	1.528088e-3	4.775274e-5
33	202643_s_at	228337_at	BE552097	PWWP2A	0.546783	7.407470e-8	1.712385e-3	5.189045e-5
34	202643_s_at	203526_s_at	M74088	APC	0.545164	8.235844e-8	1.903880e-3	5.599647e-5
35	202643_s_at	204171_at	NM_003161	RPS6KB1	0.544446	8.630915e-8	1.995209e-3	5.700596e-5
36	202643_s_at	231989_s_at	AC003007	LOC641298	0.543247	9.330376e-8	2.156903e-3	5.991397e-5
37	202643_s_at	235980_at	AA767763	PIK3CA	0.543121	9.407226e-8	2.174668e-3	5.877482e-5
38	202643_s_at	226025_at	AV740426	ANKRD28	0.539459	1.191373e-7	2.754097e-3	7.247624e-5
39	202643_s_at	218031_s_at	NM_018589	FOXN3	0.539249	1.207465e-7	2.791296e-3	7.157170e-5
40	202643_s_at	207223_s_at	NM_005156	ROD1	0.538114	1.298382e-7	3.001469e-3	7.503673e-5
41	202643_s_at	225159_s_at	AW614072	MED28	0.537740	1.329710e-7	3.073892e-3	7.497297e-5
42	202643_s_at	222745_s_at	AI924685	C15orf29	0.536058	1.479869e-7	3.421014e-3	8.145272e-5
43	202643_s_at	203202_at	AI950314	KRR1	0.535848	1.499676e-7	3.466800e-3	8.062325e-5
44	202643_s_at	208328_s_at	NM_005587	MEF2A	0.532901	1.805943e-7	4.174798e-3	9.488178e-5
45	202643_s_at	206061_s_at	NM_030621	DICER1	0.531790	1.936162e-7	4.475826e-3	9.946279e-5
46	202643_s_at	201456_s_at	AU160695	BUB3	0.531296	1.996827e-7	4.616066e-3	1.003493e-4
47	202643_s_at	204071_s_at	NM_005802	TOPORS	0.531220	2.006308e-7	4.637981e-3	9.868045e-5
48	202643_s_at	242812_at	AW294604	HCG18	0.530486	2.100323e-7	4.855316e-3	1.011524e-4
49	202643_s_at	242059_at	AW976631		0.528224	2.416794e-7	5.586902e-3	1.140184e-4
50	202643_s_at	209281_s_at	M95541	ATP2B1	0.526308	2.719846e-7	6.287467e-3	1.257493e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation