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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
User requested variable id 3874.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3874	203062_s_at	NM_014641	MDC1		mediator of DNA-damage checkpoint 1

Fetching correlation data, please wait...
Getting list of correlations for id 3874.
Getting list of p-values for id 3874.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.134 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203062_s_at	225371_at	AI638714	GLE1	0.815694	3.447305e-21	7.969135e-17	7.969135e-17
2	203062_s_at	209431_s_at	AF254083	PATZ1	0.808572	1.400418e-20	3.237345e-16	1.618673e-16
3	203062_s_at	214728_x_at	AK026573	SMARCA4	0.786145	8.101427e-19	1.872807e-14	6.242690e-15
4	203062_s_at	213720_s_at	AI831675	SMARCA4	0.776054	4.305606e-18	9.953269e-14	2.488317e-14
5	203062_s_at	212787_at	AI952986	YLPM1	0.775866	4.438216e-18	1.025982e-13	2.051965e-14
6	203062_s_at	224504_s_at	BC006350	BUD13	0.771444	8.975640e-18	2.074899e-13	3.458165e-14
7	203062_s_at	201563_at	L29008	SORD	0.769986	1.128284e-17	2.608254e-13	3.726077e-14
8	203062_s_at	224675_at	AK026606	MESDC2	0.757107	7.934983e-17	1.834330e-12	2.292913e-13
9	203062_s_at	224695_at	AK024221	C2orf29	0.754271	1.199502e-16	2.772888e-12	3.080987e-13
10	203062_s_at	225649_s_at	AA001414	STK35	0.747281	3.245513e-16	7.502653e-12	7.502653e-13
11	203062_s_at	221481_x_at	D55672	HNRNPD	0.741451	7.263138e-16	1.679020e-11	1.526381e-12
12	203062_s_at	203166_at	NM_006324	CFDP1	0.732767	2.318549e-15	5.359789e-11	4.466491e-12
13	203062_s_at	208313_s_at	NM_004630	SF1	0.727880	4.369117e-15	1.010009e-10	7.769298e-12
14	203062_s_at	225583_at	AL573637	UXS1	0.727547	4.559991e-15	1.054133e-10	7.529523e-12
15	203062_s_at	208979_at	AF128458	NCOA6	0.727087	4.836447e-15	1.118041e-10	7.453609e-12
16	203062_s_at	223322_at	BC004270	RASSF5	0.725166	6.175568e-15	1.427606e-10	8.922539e-12
17	203062_s_at	204798_at	NM_005375	MYB	0.722435	8.711450e-15	2.013826e-10	1.184604e-11
18	203062_s_at	227228_s_at	AB040942	CCDC88C	0.722214	8.955835e-15	2.070320e-10	1.150178e-11
19	203062_s_at	224611_s_at	AL118506	DNAJC5	0.721888	9.329116e-15	2.156612e-10	1.135059e-11
20	203062_s_at	202775_s_at	NM_004592	SFRS8	0.718984	1.337791e-14	3.092571e-10	1.546285e-11
21	203062_s_at	225209_s_at	BE962920	UBE2J2	0.717285	1.648510e-14	3.810860e-10	1.814695e-11
22	203062_s_at	221776_s_at	AI885109	BRD7	0.715349	2.087563e-14	4.825818e-10	2.193554e-11
23	203062_s_at	204618_s_at	NM_005254	GABPB1	0.715165	2.134775e-14	4.934960e-10	2.145635e-11
24	203062_s_at	202681_at	AI346043	USP4	0.713056	2.754398e-14	6.367341e-10	2.653059e-11
25	203062_s_at	1555844_s_at	AL713781	HNRNPM	0.711096	3.483452e-14	8.052696e-10	3.221078e-11
26	203062_s_at	226177_at	AI052020	GLTP	0.705268	6.922717e-14	1.600324e-9	6.155094e-11
27	203062_s_at	218586_at	NM_018270	C20orf20	0.704611	7.472362e-14	1.727386e-9	6.397726e-11
28	203062_s_at	215714_s_at	AF254822	SMARCA4	0.704241	7.799946e-14	1.803114e-9	6.439691e-11
29	203062_s_at	224922_at	AI022089	CSNK2A2	0.703145	8.854535e-14	2.046903e-9	7.058286e-11
30	203062_s_at	40225_at	D88435	GAK	0.702902	9.105803e-14	2.104989e-9	7.016628e-11
31	203062_s_at	202215_s_at	NM_014223	NFYC	0.702539	9.494447e-14	2.194831e-9	7.080101e-11
32	203062_s_at	209221_s_at	AI753638	OSBPL2	0.700055	1.261975e-13	2.917309e-9	9.116589e-11
33	203062_s_at	204022_at	AI668780	WWP2	0.696362	1.916025e-13	4.429275e-9	1.342205e-10
34	203062_s_at	225456_at	AI708776	MED1	0.693720	2.573292e-13	5.948679e-9	1.749612e-10
35	203062_s_at	224748_at	AK025925	DCAF7	0.693350	2.681166e-13	6.198052e-9	1.770872e-10
36	203062_s_at	218809_at	NM_024960	PANK2	0.690499	3.670944e-13	8.486122e-9	2.357256e-10
37	203062_s_at	209444_at	BC001851	RAP1GDS1	0.688261	4.686494e-13	1.083377e-8	2.928045e-10
38	203062_s_at	218777_at	NM_025232	REEP4	0.688145	4.746072e-13	1.097149e-8	2.887235e-10
39	203062_s_at	202562_s_at	AL136658	C14orf1	0.687282	5.211186e-13	1.204670e-8	3.088897e-10
40	203062_s_at	226626_at	AL133117	THOC2	0.685493	6.319691e-13	1.460923e-8	3.652307e-10
41	203062_s_at	227254_at	N56956	POU2F1	0.685420	6.369684e-13	1.472480e-8	3.591414e-10
42	203062_s_at	241344_at	AI821780		0.684976	6.680604e-13	1.544355e-8	3.677036e-10
43	203062_s_at	217866_at	NM_024811	CPSF7	0.684014	7.404320e-13	1.711657e-8	3.980597e-10
44	203062_s_at	209128_s_at	D63879	SART3	0.683924	7.476324e-13	1.728302e-8	3.927959e-10
45	203062_s_at	211783_s_at	BC006177	MTA1	0.683623	7.720145e-13	1.784666e-8	3.965924e-10
46	203062_s_at	228466_at	AI150690		0.683580	7.755254e-13	1.792782e-8	3.897352e-10
47	203062_s_at	223031_s_at	AL136921	TRAF7	0.682908	8.331056e-13	1.925890e-8	4.097639e-10
48	203062_s_at	212726_at	AB014562	PHF2	0.682316	8.871868e-13	2.050910e-8	4.272729e-10
49	203062_s_at	213671_s_at	AA621558	MARS	0.681444	9.730115e-13	2.249311e-8	4.590430e-10
50	203062_s_at	215482_s_at	AJ011307	EIF2B4	0.680750	1.046903e-12	2.420125e-8	4.840250e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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