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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
2218	201137_s_at	NM_002121	HLA-DPB1		major histocompatibility complex, class II, DP beta 1

Fetching correlation data, please wait...
Getting list of correlations for id 2218.
Getting list of p-values for id 2218.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.138 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	201137_s_at	203932_at	NM_002118	HLA-DMB	0.755049	1.071612e-16	2.477246e-12	2.477246e-12
2	201137_s_at	211991_s_at	M27487	HLA-DPA1	0.746846	3.448978e-16	7.973002e-12	3.986501e-12
3	201137_s_at	217478_s_at	X76775		0.723694	7.437754e-15	1.719386e-10	5.731285e-11
4	201137_s_at	208306_x_at	NM_021983	HLA-DRB4	0.698763	1.461543e-13	3.378650e-9	8.446625e-10
5	201137_s_at	210982_s_at	M60333	HLA-DRA	0.683102	8.160835e-13	1.886540e-8	3.773080e-9
6	201137_s_at	204670_x_at	NM_002125		0.663810	5.895942e-12	1.362965e-7	2.271608e-8
7	201137_s_at	209312_x_at	U65585		0.663430	6.121069e-12	1.415007e-7	2.021439e-8
8	201137_s_at	215193_x_at	AJ297586		0.649158	2.408991e-11	5.568864e-7	6.961079e-8
9	201137_s_at	208894_at	M60334	HLA-DRA	0.640930	5.138038e-11	1.187760e-6	1.319734e-7
10	201137_s_at	226878_at	AL581873	HLA-DOA	0.636485	7.663838e-11	1.771649e-6	1.771649e-7
11	201137_s_at	209619_at	K01144	CD74	0.630247	1.328745e-10	3.071659e-6	2.792417e-7
12	201137_s_at	200905_x_at	NM_005516	HLA-E	0.599975	1.625691e-9	3.758109e-5	3.131757e-6
13	201137_s_at	1567628_at	M28590	CD74	0.585988	4.745362e-9	1.096985e-4	8.438348e-6
14	201137_s_at	204416_x_at	NM_001645	APOC1	0.575590	1.018836e-8	2.355244e-4	1.682317e-5
15	201137_s_at	204806_x_at	NM_018950	HLA-F	0.562911	2.496969e-8	5.772244e-4	3.848163e-5
16	201137_s_at	215925_s_at	AF283777	CD72	0.555330	4.192786e-8	9.692463e-4	6.057790e-5
17	201137_s_at	212671_s_at	BG397856		0.548190	6.752366e-8	1.560945e-3	9.182027e-5
18	201137_s_at	202953_at	NM_000491	C1QB	0.534406	1.642808e-7	3.797679e-3	2.109822e-4
19	201137_s_at	213553_x_at	W79394	APOC1	0.533912	1.694709e-7	3.917660e-3	2.061926e-4
20	201137_s_at	1555759_a_at	AF043341	CCL5	0.530964	2.038666e-7	4.712785e-3	2.356393e-4
21	201137_s_at	204279_at	NM_002800	PSMB9	0.529356	2.253224e-7	5.208779e-3	2.480371e-4
22	201137_s_at	221875_x_at	AW514210	HLA-F	0.525628	2.835763e-7	6.555432e-3	2.979742e-4
23	201137_s_at	218232_at	NM_015991	C1QA	0.525539	2.851239e-7	6.591208e-3	2.865743e-4
24	201137_s_at	204070_at	NM_004585	RARRES3	0.525132	2.923271e-7	6.757726e-3	2.815719e-4
25	201137_s_at	1557116_at	BM980001	APOL6	0.521487	3.649159e-7	8.435760e-3	3.374304e-4
26	201137_s_at	217983_s_at	NM_003730	RNASET2	0.518896	4.265816e-7	9.861286e-3	3.792802e-4
27	201137_s_at	204787_at	NM_007268	VSIG4	0.513967	5.720701e-7	1.322454e-2	4.897979e-4
28	201137_s_at	201847_at	NM_000235	LIPA	0.512191	6.351787e-7	1.468343e-2	5.244081e-4
29	201137_s_at	216526_x_at	AK024836	HLA-C	0.511666	6.550529e-7	1.514286e-2	5.221675e-4
30	201137_s_at	217984_at	NM_003730	RNASET2	0.510447	7.034635e-7	1.626196e-2	5.420655e-4
31	201137_s_at	204103_at	NM_002984	CCL4	0.508168	8.032479e-7	1.856868e-2	5.989897e-4
32	201137_s_at	205831_at	NM_001767	CD2	0.506862	8.663223e-7	2.002677e-2	6.258367e-4
33	201137_s_at	214459_x_at	M12679	HLA-C	0.500928	1.216471e-6	2.812116e-2	8.521564e-4
34	201137_s_at	231846_at	AK026975	FOXRED2	0.498575	1.389259e-6	3.211549e-2	9.445732e-4
35	201137_s_at	205488_at	NM_006144	GZMA	0.497881	1.444533e-6	3.339327e-2	9.540934e-4
36	201137_s_at	209970_x_at	M87507	CASP1	0.497193	1.501296e-6	3.470545e-2	9.640404e-4
37	201137_s_at	1554240_a_at	BC008777	ITGAL	0.497107	1.508580e-6	3.487385e-2	9.425365e-4
38	201137_s_at	202838_at	NM_000147	FUCA1	0.495100	1.687401e-6	3.900766e-2	1.026517e-3
39	201137_s_at	1555756_a_at	AF400600	CLEC7A	0.494310	1.763134e-6	4.075837e-2	1.045086e-3
40	201137_s_at	202269_x_at	BC002666	GBP1	0.494219	1.772064e-6	4.096481e-2	1.024120e-3
41	201137_s_at	209140_x_at	L42024	HLA-B	0.487923	2.504134e-6	5.788806e-2	1.411904e-3
42	201137_s_at	210514_x_at	AF226990	HLA-G	0.487096	2.619257e-6	6.054937e-2	1.441652e-3
43	201137_s_at	203473_at	NM_007256	SLCO2B1	0.482422	3.368896e-6	7.787877e-2	1.811134e-3
44	201137_s_at	209040_s_at	U17496	PSMB8	0.480076	3.817196e-6	8.824213e-2	2.005503e-3
45	201137_s_at	223280_x_at	AF253977	MS4A6A	0.478258	4.202483e-6	9.714881e-2	2.158862e-3
46	201137_s_at	244485_at	AW402154		0.476516	4.605776e-6	1.064717e-1	2.314603e-3
47	201137_s_at	211366_x_at	U13698	CASP1	0.475700	4.807100e-6	1.111257e-1	2.364377e-3
48	201137_s_at	217456_x_at	M31183	HLA-E	0.474499	5.118363e-6	1.183212e-1	2.465025e-3
49	201137_s_at	210895_s_at	L25259	CD86	0.474336	5.161910e-6	1.193279e-1	2.435263e-3
50	201137_s_at	210321_at	M36118	GZMH	0.474325	5.164943e-6	1.193980e-1	2.387960e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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