[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
3784	202948_at	NM_000877	IL1R1		interleukin 1 receptor, type I
10476	215561_s_at	AK026803	IL1R1		interleukin 1 receptor, type I

Fetching correlation data, please wait...
Getting list of correlations for id 3784.
Getting list of p-values for id 3784.
1 of 2 done.
Getting list of correlations for id 10476.
Getting list of p-values for id 10476.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.173 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202948_at	218181_s_at	NM_017792	MAP4K4	0.661054	7.729135e-12	3.573488e-7	3.573488e-7
2	202948_at	226621_at	AI133452	FGG	0.651443	1.944101e-11	8.988359e-7	4.494179e-7
3	202948_at	212110_at	D31887	SLC39A14	0.635250	8.554573e-11	3.955121e-6	1.318374e-6
4	202948_at	201976_s_at	NM_012334	MYO10	0.632102	1.129607e-10	5.222624e-6	1.305656e-6
5	202948_at	221024_s_at	NM_030777	SLC2A10	0.630269	1.326156e-10	6.131351e-6	1.226270e-6
6	202948_at	225975_at	AW189885	PCDH18	0.629338	1.438224e-10	6.649483e-6	1.108247e-6
7	202948_at	201307_at	AL534972	SEPT11	0.614309	5.133835e-10	2.373577e-5	3.390824e-6
8	202948_at	203329_at	NM_002845	PTPRM	0.608392	8.319799e-10	3.846576e-5	4.808220e-6
9	202948_at	212765_at	AB029001	CAMSAP1L1	0.606806	9.452968e-10	4.370485e-5	4.856095e-6
10	202948_at	231130_at	AA683602	FKBP7	0.606253	9.882180e-10	4.568927e-5	4.568927e-6
11	202948_at	216037_x_at	AA664011	TCF7L2	0.604796	1.110272e-9	5.133234e-5	4.666576e-6
12	202948_at	225481_at	AL040051	FRMD6	0.603924	1.190139e-9	5.502488e-5	4.585406e-6
13	202948_at	212522_at	W73272	PDE8A	0.601700	1.419318e-9	6.562075e-5	5.047750e-6
14	202948_at	201778_s_at	NM_014774	KIAA0494	0.600754	1.529186e-9	7.070038e-5	5.050027e-6
15	202948_at	204400_at	NM_005864	EFS	0.600348	1.578704e-9	7.298979e-5	4.865986e-6
16	202948_at	203131_at	NM_006206	PDGFRA	0.596785	2.084894e-9	9.639300e-5	6.024563e-6
17	202948_at	209108_at	AF053453	TSPAN6	0.596235	2.175840e-9	1.005978e-4	5.917517e-6
18	202948_at	226490_at	AA503387	NHSL1	0.594416	2.503751e-9	1.157584e-4	6.431024e-6
19	202948_at	202620_s_at	NM_000935	PLOD2	0.593287	2.730541e-9	1.262438e-4	6.644412e-6
20	202948_at	212950_at	BF941499	GPR116	0.589758	3.573032e-9	1.651956e-4	8.259778e-6
21	202948_at	209583_s_at	AF063591	CD200	0.588981	3.789237e-9	1.751916e-4	8.342456e-6
22	202948_at	212698_s_at	BF966021	SEPT10	0.588559	3.912026e-9	1.808686e-4	8.221301e-6
23	202948_at	212071_s_at	BE968833	SPTBN1	0.587042	4.385078e-9	2.027397e-4	8.814769e-6
24	202948_at	225575_at	AI680541	LIFR	0.586219	4.663790e-9	2.156257e-4	8.984403e-6
25	202948_at	213435_at	AB028957	SATB2	0.585627	4.875003e-9	2.253909e-4	9.015636e-6
26	202948_at	212793_at	BF513244	DAAM2	0.584633	5.249999e-9	2.427284e-4	9.335709e-6
27	202948_at	227874_at	AI635774	EMCN	0.584360	5.357731e-9	2.477093e-4	9.174420e-6
28	202948_at	218718_at	NM_016205	PDGFC	0.584213	5.416492e-9	2.504261e-4	8.943789e-6
29	202948_at	205876_at	NM_002310	LIFR	0.583769	5.598343e-9	2.588338e-4	8.925304e-6
30	202948_at	209109_s_at	U84895	TSPAN6	0.583042	5.908127e-9	2.731563e-4	9.105212e-6
31	202948_at	204955_at	NM_006307	SRPX	0.582230	6.273681e-9	2.900574e-4	9.356689e-6
32	202948_at	202973_x_at	NM_014883	FAM13A	0.582173	6.300063e-9	2.912771e-4	9.102410e-6
33	202948_at	225442_at	AI799915	DDR2	0.581992	6.384875e-9	2.951983e-4	8.945404e-6
34	202948_at	235074_at	BF342524	SPRED1	0.579851	7.473454e-9	3.455277e-4	1.016258e-5
35	202948_at	212985_at	BF115739	APBB2	0.579284	7.789637e-9	3.601461e-4	1.028989e-5
36	202948_at	202759_s_at	BE879367		0.579072	7.911260e-9	3.657692e-4	1.016026e-5
37	202948_at	202515_at	BG251175	DLG1	0.577864	8.639642e-9	3.994452e-4	1.079582e-5
38	202948_at	226169_at	AW276572	SBF2	0.576647	9.438043e-9	4.363585e-4	1.148312e-5
39	202948_at	212112_s_at	AI816243	STX12	0.576544	9.508639e-9	4.396224e-4	1.127237e-5
40	202948_at	202011_at	NM_003257	TJP1	0.573876	1.152652e-8	5.329173e-4	1.332293e-5
41	202948_at	212458_at	H97931	SPRED2	0.573598	1.175825e-8	5.436311e-4	1.325929e-5
42	202948_at	203935_at	NM_001105	ACVR1	0.572414	1.279886e-8	5.917427e-4	1.408911e-5
43	202948_at	218098_at	AL121903	ARFGEF2	0.572014	1.316957e-8	6.088818e-4	1.416004e-5
44	202948_at	213413_at	BG434174		0.568982	1.633191e-8	7.550894e-4	1.716112e-5
45	202948_at	212535_at	AA142929		0.568029	1.746716e-8	8.075765e-4	1.794615e-5
46	202948_at	224616_at	BG110975	DYNC1LI2	0.567936	1.758229e-8	8.128997e-4	1.767173e-5
47	202948_at	228141_at	AA173223	GPX8	0.567531	1.809094e-8	8.364165e-4	1.779610e-5
48	202948_at	204201_s_at	NM_006264	PTPN13	0.566943	1.885311e-8	8.716545e-4	1.815947e-5
49	202948_at	227070_at	W63754	GLT8D2	0.566703	1.917308e-8	8.864481e-4	1.809078e-5
50	202948_at	213423_x_at	AI884858	TUSC3	0.565980	2.016859e-8	9.324744e-4	1.864949e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation