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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
503	1555579_s_at	BC029442	PTPRM		protein tyrosine phosphatase, receptor type, M
4096	203329_at	NM_002845	PTPRM		protein tyrosine phosphatase, receptor type, M

Fetching correlation data, please wait...
Getting list of correlations for id 503.
Getting list of p-values for id 503.
1 of 2 done.
Getting list of correlations for id 4096.
Getting list of p-values for id 4096.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.321 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203329_at	1555579_s_at	BC029442	PTPRM	0.926579	1.415090e-36	6.542526e-32	6.542526e-32
2	1555579_s_at	203329_at	NM_002845	PTPRM	0.926579	1.415090e-36	6.542526e-32	3.271263e-32
3	1555579_s_at	212950_at	BF941499	GPR116	0.888622	1.715462e-29	7.931268e-25	2.643756e-25
4	203329_at	226282_at	AW129783	PTPN14	0.865227	2.621597e-26	1.212069e-21	3.030173e-22
5	203329_at	200771_at	NM_002293	LAMC1	0.854517	4.818138e-25	2.227618e-20	4.455236e-21
6	203329_at	202011_at	NM_003257	TJP1	0.851391	1.078614e-24	4.986866e-20	8.311443e-21
7	203329_at	212950_at	BF941499	GPR116	0.850659	1.299477e-24	6.008000e-20	8.582857e-21
8	1555579_s_at	226282_at	AW129783	PTPN14	0.847367	2.964445e-24	1.370581e-19	1.713227e-20
9	1555579_s_at	212538_at	AL576253	DOCK9	0.846703	3.492721e-24	1.614825e-19	1.794250e-20
10	1555579_s_at	224895_at	AA557632	YAP1	0.846572	3.606834e-24	1.667584e-19	1.667584e-20
11	1555579_s_at	224928_at	AK024846	SETD7	0.846180	3.972189e-24	1.836502e-19	1.669547e-20
12	203329_at	209656_s_at	AL136550	TMEM47	0.841462	1.240786e-23	5.736650e-19	4.780542e-20
13	203329_at	206201_s_at	NM_005924	MEOX2	0.840427	1.585338e-23	7.329653e-19	5.638194e-20
14	203329_at	224694_at	AF279145	ANTXR1	0.840170	1.684037e-23	7.785977e-19	5.561412e-20
15	1555579_s_at	200771_at	NM_002293	LAMC1	0.838678	2.388306e-23	1.104210e-18	7.361397e-20
16	203329_at	224894_at	BF247906	YAP1	0.837653	3.030044e-23	1.400911e-18	8.755692e-20
17	203329_at	224928_at	AK024846	SETD7	0.837411	3.204522e-23	1.481579e-18	8.715169e-20
18	203329_at	212097_at	AU147399	CAV1	0.836516	3.938640e-23	1.820991e-18	1.011662e-19
19	203329_at	226380_at	N21442	PTPN21	0.832954	8.837849e-23	4.086091e-18	2.150574e-19
20	203329_at	216215_s_at	AL049748	RBM9	0.832524	9.731658e-23	4.499335e-18	2.249667e-19
21	1555579_s_at	224894_at	BF247906	YAP1	0.831487	1.226093e-22	5.668717e-18	2.699389e-19
22	1555579_s_at	202011_at	NM_003257	TJP1	0.829874	1.751060e-22	8.095850e-18	3.679932e-19
23	1555579_s_at	209656_s_at	AL136550	TMEM47	0.828025	2.622001e-22	1.212256e-17	5.270677e-19
24	203329_at	227126_at	AI857788		0.825702	4.326572e-22	2.000347e-17	8.334781e-19
25	203329_at	200795_at	NM_004684	SPARCL1	0.824722	5.331956e-22	2.465177e-17	9.860707e-19
26	1555579_s_at	200878_at	AF052094	EPAS1	0.824545	5.535815e-22	2.559429e-17	9.843957e-19
27	203329_at	202133_at	BF674349	WWTR1	0.822931	7.786779e-22	3.600139e-17	1.333385e-18
28	1555579_s_at	228728_at	BF724137	C7orf58	0.822822	7.967525e-22	3.683706e-17	1.315609e-18
29	203329_at	228728_at	BF724137	C7orf58	0.821483	1.054206e-21	4.874014e-17	1.680695e-18
30	1555579_s_at	224694_at	AF279145	ANTXR1	0.820483	1.297500e-21	5.998862e-17	1.999621e-18
31	203329_at	212538_at	AL576253	DOCK9	0.819726	1.517198e-21	7.014614e-17	2.262779e-18
32	1555579_s_at	227126_at	AI857788		0.818895	1.799922e-21	8.321759e-17	2.600550e-18
33	203329_at	204677_at	NM_001795	CDH5	0.816169	3.132916e-21	1.448472e-16	4.389310e-18
34	203329_at	203706_s_at	NM_003507	FZD7	0.816002	3.240391e-21	1.498162e-16	4.406360e-18
35	203329_at	215016_x_at	BC004912	DST	0.815999	3.241946e-21	1.498881e-16	4.282518e-18
36	1555579_s_at	200795_at	NM_004684	SPARCL1	0.814554	4.332155e-21	2.002928e-16	5.563690e-18
37	1555579_s_at	212698_s_at	BF966021	SEPT10	0.814278	4.576957e-21	2.116110e-16	5.719217e-18
38	203329_at	231807_at	AL157473	KIAA1217	0.813632	5.205128e-21	2.406539e-16	6.332997e-18
39	1555579_s_at	226380_at	N21442	PTPN21	0.813482	5.362660e-21	2.479372e-16	6.357365e-18
40	1555579_s_at	204677_at	NM_001795	CDH5	0.811839	7.416823e-21	3.429094e-16	8.572734e-18
41	1555579_s_at	212097_at	AU147399	CAV1	0.811759	7.533975e-21	3.483258e-16	8.495752e-18
42	1555579_s_at	215016_x_at	BC004912	DST	0.811744	7.557013e-21	3.493909e-16	8.318832e-18
43	203329_at	212254_s_at	AI798790	DST	0.809943	1.074285e-20	4.966851e-16	1.155082e-17
44	203329_at	206385_s_at	NM_020987	ANK3	0.807878	1.600444e-20	7.399495e-16	1.681703e-17
45	1555579_s_at	225162_at	BG285417	SH3D19	0.806065	2.262477e-20	1.046034e-15	2.324519e-17
46	203329_at	202342_s_at	NM_015271	TRIM2	0.805443	2.545532e-20	1.176901e-15	2.558481e-17
47	203329_at	210139_s_at	L03203	PMP22	0.805210	2.660330e-20	1.229977e-15	2.616973e-17
48	1555579_s_at	226322_at	BF109231	TMTC1	0.804941	2.798513e-20	1.293864e-15	2.695551e-17
49	203329_at	206101_at	NM_001393	ECM2	0.802637	4.310028e-20	1.992698e-15	4.066731e-17
50	203329_at	214620_x_at	BF038548	PAM	0.801699	5.130367e-20	2.371974e-15	4.743948e-17

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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