[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
16321	226380_at	N21442	PTPN21		protein tyrosine phosphatase, non-receptor type 21

Fetching correlation data, please wait...
Getting list of correlations for id 16321.
Getting list of p-values for id 16321.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.175 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	226380_at	200771_at	NM_002293	LAMC1	0.877886	5.978247e-28	1.381991e-23	1.381991e-23
2	226380_at	224928_at	AK024846	SETD7	0.872936	2.750624e-27	6.358619e-23	3.179309e-23
3	226380_at	226932_at	AW467136	SSPN	0.865503	2.424267e-26	5.604178e-22	1.868059e-22
4	226380_at	224694_at	AF279145	ANTXR1	0.865430	2.474793e-26	5.720980e-22	1.430245e-22
5	226380_at	213029_at	BG478428	NFIB	0.865376	2.513434e-26	5.810305e-22	1.162061e-22
6	226380_at	212503_s_at	N22859	DIP2C	0.862220	6.084155e-26	1.406474e-21	2.344123e-22
7	226380_at	209656_s_at	AL136550	TMEM47	0.860957	8.615304e-26	1.991600e-21	2.845142e-22
8	226380_at	215016_x_at	BC004912	DST	0.857342	2.287623e-25	5.288297e-21	6.610371e-22
9	226380_at	202133_at	BF674349	WWTR1	0.857064	2.463570e-25	5.695035e-21	6.327817e-22
10	226380_at	203706_s_at	NM_003507	FZD7	0.854985	4.263752e-25	9.856515e-21	9.856515e-22
11	226380_at	224894_at	BF247906	YAP1	0.851009	1.189000e-24	2.748611e-20	2.498737e-21
12	226380_at	231807_at	AL157473	KIAA1217	0.850057	1.513104e-24	3.497843e-20	2.914869e-21
13	226380_at	200897_s_at	NM_016081	PALLD	0.847379	2.955316e-24	6.831803e-20	5.255233e-21
14	226380_at	226282_at	AW129783	PTPN14	0.846244	3.909701e-24	9.038055e-20	6.455753e-21
15	226380_at	225728_at	AI659533	SORBS2	0.844856	5.488647e-24	1.268811e-19	8.458738e-21
16	226380_at	212845_at	AB028976	SAMD4A	0.844729	5.660270e-24	1.308485e-19	8.178029e-21
17	226380_at	216215_s_at	AL049748	RBM9	0.844588	5.858244e-24	1.354250e-19	7.966178e-21
18	226380_at	202920_at	BF726212	ANK2	0.842653	9.339745e-24	2.159069e-19	1.199483e-20
19	226380_at	212327_at	AK026815	LIMCH1	0.841127	1.343305e-23	3.105317e-19	1.634378e-20
20	226380_at	225019_at	BF797381	CAMK2D	0.839829	1.824639e-23	4.218019e-19	2.109009e-20
21	226380_at	206385_s_at	NM_020987	ANK3	0.837790	2.935460e-23	6.785902e-19	3.231382e-20
22	226380_at	226695_at	AA775472	PRRX1	0.835859	4.578461e-23	1.058403e-18	4.810922e-20
23	226380_at	202342_s_at	NM_015271	TRIM2	0.835642	4.810985e-23	1.112155e-18	4.835458e-20
24	226380_at	212254_s_at	AI798790	DST	0.833355	8.077352e-23	1.867242e-18	7.780173e-20
25	226380_at	203329_at	NM_002845	PTPRM	0.832954	8.837849e-23	2.043046e-18	8.172182e-20
26	226380_at	223395_at	AB056106	ABI3BP	0.832455	9.882231e-23	2.284475e-18	8.786444e-20
27	226380_at	203789_s_at	NM_006379	SEMA3C	0.832433	9.931562e-23	2.295879e-18	8.503256e-20
28	226380_at	204992_s_at	NM_002628	PFN2	0.831388	1.253292e-22	2.897234e-18	1.034727e-19
29	226380_at	200907_s_at	AU157932	PALLD	0.831306	1.276424e-22	2.950710e-18	1.017486e-19
30	226380_at	223279_s_at	AF322916	UACA	0.830902	1.395850e-22	3.226786e-18	1.075595e-19
31	226380_at	212097_at	AU147399	CAV1	0.829835	1.766029e-22	4.082530e-18	1.316945e-19
32	226380_at	222433_at	AK025108	ENAH	0.828582	2.322898e-22	5.369843e-18	1.678076e-19
33	226380_at	225328_at	N21643		0.828442	2.395012e-22	5.536550e-18	1.677742e-19
34	226380_at	212096_s_at	AL096842	MTUS1	0.828261	2.491090e-22	5.758652e-18	1.693721e-19
35	226380_at	225162_at	BG285417	SH3D19	0.827800	2.753661e-22	6.365639e-18	1.818754e-19
36	226380_at	202011_at	NM_003257	TJP1	0.827099	3.204434e-22	7.407691e-18	2.057692e-19
37	226380_at	214620_x_at	BF038548	PAM	0.826412	3.715498e-22	8.589116e-18	2.321383e-19
38	226380_at	209335_at	AI281593	DCN	0.825943	4.108551e-22	9.497737e-18	2.499405e-19
39	226380_at	209684_at	AL136924	RIN2	0.825855	4.186729e-22	9.678462e-18	2.481657e-19
40	226380_at	206201_s_at	NM_005924	MEOX2	0.824795	5.250412e-22	1.213738e-17	3.034344e-19
41	226380_at	228728_at	BF724137	C7orf58	0.821418	1.068622e-21	2.470334e-17	6.025204e-19
42	226380_at	227274_at	AI709389	SYNJ2BP	0.817399	2.442566e-21	5.646479e-17	1.344400e-18
43	226380_at	212764_at	AI806174	ZEB1	0.816992	2.652623e-21	6.132068e-17	1.426062e-18
44	226380_at	209200_at	AL536517	MEF2C	0.816452	2.958720e-21	6.839673e-17	1.554471e-18
45	226380_at	227623_at	H16409		0.816129	3.158032e-21	7.300424e-17	1.622316e-18
46	226380_at	228347_at	N79004	SIX1	0.815621	3.498607e-21	8.087731e-17	1.758202e-18
47	226380_at	223316_at	AL136562	CCDC3	0.813991	4.846577e-21	1.120383e-16	2.383794e-18
48	226380_at	235183_at	AI479277		0.813896	4.938576e-21	1.141651e-16	2.378439e-18
49	226380_at	1555579_s_at	BC029442	PTPRM	0.813482	5.362660e-21	1.239686e-16	2.529972e-18
50	226380_at	210139_s_at	L03203	PMP22	0.812838	6.091237e-21	1.408111e-16	2.816223e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation