[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4696	204123_at	NM_013975	LIG3		ligase III, DNA, ATP-dependent
6120	207348_s_at	NM_002311	LIG3		ligase III, DNA, ATP-dependent

Fetching correlation data, please wait...
Getting list of correlations for id 4696.
Getting list of p-values for id 4696.
1 of 2 done.
Getting list of correlations for id 6120.
Getting list of p-values for id 6120.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.204 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	207348_s_at	201850_at	NM_001747	CAPG	0.673154	2.304603e-12	1.065510e-7	1.065510e-7
2	207348_s_at	218282_at	NM_018217	EDEM2	0.662097	6.978511e-12	3.226445e-7	1.613222e-7
3	204123_at	207348_s_at	NM_002311	LIG3	0.658325	1.007723e-11	4.659105e-7	1.553035e-7
4	207348_s_at	204123_at	NM_013975	LIG3	0.658325	1.007723e-11	4.659105e-7	1.164776e-7
5	204123_at	227184_at	BF508702		0.644702	3.641139e-11	1.683444e-6	3.366888e-7
6	207348_s_at	228725_x_at	BF003112	PRMT2	0.639155	6.032093e-11	2.788878e-6	4.648130e-7
7	204123_at	214198_s_at	AU150824	DGCR2	0.635656	8.251353e-11	3.814930e-6	5.449901e-7
8	204123_at	217794_at	NM_018457	PRR13	0.634919	8.809151e-11	4.072823e-6	5.091028e-7
9	204123_at	220023_at	NM_018690	APOB48R	0.634821	8.886050e-11	4.108376e-6	4.564863e-7
10	204123_at	212415_at	AW150913	SEPT6	0.630766	1.269894e-10	5.871229e-6	5.871229e-7
11	204123_at	218282_at	NM_018217	EDEM2	0.630638	1.284101e-10	5.936912e-6	5.397192e-7
12	207348_s_at	201118_at	NM_002631	PGD	0.625874	1.940015e-10	8.969466e-6	7.474555e-7
13	207348_s_at	212025_s_at	BG421186	FLII	0.625120	2.069640e-10	9.568773e-6	7.360594e-7
14	204123_at	206464_at	NM_001721	BMX	0.623627	2.351296e-10	1.087098e-5	7.764987e-7
15	204123_at	222732_at	BF514859	TRIM39	0.622825	2.517267e-10	1.163833e-5	7.758889e-7
16	207348_s_at	209949_at	BC001606	NCF2	0.622748	2.533820e-10	1.171486e-5	7.321790e-7
17	204123_at	209949_at	BC001606	NCF2	0.621790	2.748166e-10	1.270587e-5	7.474040e-7
18	207348_s_at	214437_s_at	NM_005412	SHMT2	0.621591	2.794912e-10	1.292199e-5	7.178886e-7
19	207348_s_at	1555407_s_at	BC032232	FGD3	0.621542	2.806457e-10	1.297537e-5	6.829144e-7
20	204123_at	229686_at	AI436587	P2RY8	0.621482	2.820813e-10	1.304175e-5	6.520874e-7
21	207348_s_at	1553723_at	NM_170776	GPR97	0.621401	2.840008e-10	1.313049e-5	6.252615e-7
22	204123_at	1552553_a_at	NM_021209	NLRC4	0.615816	4.532675e-10	2.095637e-5	9.525622e-7
23	204123_at	219889_at	NM_005479	FRAT1	0.614257	5.155697e-10	2.383685e-5	1.036385e-6
24	207348_s_at	217977_at	NM_016332	SEPX1	0.613857	5.328343e-10	2.463506e-5	1.026461e-6
25	207348_s_at	1552977_a_at	NM_006586	CNPY3	0.612223	6.093467e-10	2.817254e-5	1.126901e-6
26	204123_at	203460_s_at	NM_007318	PSEN1	0.612043	6.183711e-10	2.858977e-5	1.099606e-6
27	204123_at	202794_at	NM_002194	INPP1	0.610750	6.872026e-10	3.177212e-5	1.176745e-6
28	204123_at	228532_at	AW662189	C1orf162	0.609158	7.820090e-10	3.615541e-5	1.291265e-6
29	204123_at	207857_at	NM_006866	LILRA2	0.609113	7.848337e-10	3.628600e-5	1.251241e-6
30	207348_s_at	210502_s_at	AF042386	PPIE	0.608167	8.471892e-10	3.916894e-5	1.305631e-6
31	204123_at	52975_at	AA534894	FAM125B	0.608132	8.496259e-10	3.928160e-5	1.267149e-6
32	204123_at	236345_at	AA044825	TBXAS1	0.607377	9.029006e-10	4.174471e-5	1.304522e-6
33	204123_at	224612_s_at	AI935180	DNAJC5	0.607214	9.148487e-10	4.229711e-5	1.281731e-6
34	207348_s_at	228685_at	AI990349		0.606174	9.944810e-10	4.597883e-5	1.352319e-6
35	207348_s_at	224613_s_at	BF115518	DNAJC5	0.604739	1.115319e-9	5.156565e-5	1.473304e-6
36	204123_at	217977_at	NM_016332	SEPX1	0.604331	1.152167e-9	5.326930e-5	1.479703e-6
37	204123_at	234950_s_at	AK001278	RFWD2	0.603545	1.226483e-9	5.670521e-5	1.532573e-6
38	207348_s_at	210541_s_at	AF230394	TRIM27	0.602709	1.310523e-9	6.059074e-5	1.594493e-6
39	207348_s_at	206208_at	NM_000717	CA4	0.602025	1.383449e-9	6.396238e-5	1.640061e-6
40	207348_s_at	219447_s_at	NM_015945	SLC35C2	0.601670	1.422741e-9	6.577903e-5	1.644476e-6
41	207348_s_at	205147_x_at	NM_000631	NCF4	0.601230	1.472947e-9	6.810022e-5	1.660981e-6
42	207348_s_at	211543_s_at	AF040752	GRK6	0.600289	1.586054e-9	7.332962e-5	1.745943e-6
43	207348_s_at	205715_at	NM_004334	BST1	0.600046	1.616671e-9	7.474517e-5	1.738260e-6
44	207348_s_at	224612_s_at	AI935180	DNAJC5	0.598907	1.767432e-9	8.171546e-5	1.857170e-6
45	207348_s_at	204652_s_at	NM_005011	NRF1	0.597690	1.943453e-9	8.985359e-5	1.996747e-6
46	204123_at	208919_s_at	BC001709	NADK	0.596990	2.052093e-9	9.487646e-5	2.062532e-6
47	207348_s_at	206464_at	NM_001721	BMX	0.596896	2.067052e-9	9.556809e-5	2.033364e-6
48	204123_at	203292_s_at	NM_021729	VPS11	0.596358	2.155134e-9	9.964048e-5	2.075843e-6
49	204123_at	229770_at	AI041543	GLT1D1	0.595123	2.371032e-9	1.096223e-4	2.237189e-6
50	204123_at	213541_s_at	AI351043	ERG	0.594645	2.459990e-9	1.137352e-4	2.274703e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation