[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5812	206208_at	NM_000717	CA4		carbonic anhydrase IV
5813	206209_s_at	NM_000717	CA4		carbonic anhydrase IV

Fetching correlation data, please wait...
Getting list of correlations for id 5812.
Getting list of p-values for id 5812.
1 of 2 done.
Getting list of correlations for id 5813.
Getting list of p-values for id 5813.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.279 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	206209_s_at	206208_at	NM_000717	CA4	0.823595	6.769795e-22	3.129947e-17	3.129947e-17
2	206208_at	206209_s_at	NM_000717	CA4	0.823595	6.769795e-22	3.129947e-17	1.564973e-17
3	206208_at	225059_at	BE875567	AGTRAP	0.779728	2.367784e-18	1.094721e-13	3.649071e-14
4	206208_at	217977_at	NM_016332	SEPX1	0.778737	2.785287e-18	1.287750e-13	3.219374e-14
5	206208_at	214523_at	NM_001805	CEBPE	0.765056	2.415883e-17	1.116959e-12	2.233919e-13
6	206208_at	208438_s_at	NM_005248	FGR	0.760852	4.557290e-17	2.107017e-12	3.511696e-13
7	206208_at	206380_s_at	NM_002621	CFP	0.757732	7.238201e-17	3.346510e-12	4.780728e-13
8	206208_at	241742_at	AW027174	PRAM1	0.757175	7.855327e-17	3.631832e-12	4.539790e-13
9	206209_s_at	223767_at	AF237762	GPR84	0.755689	9.762945e-17	4.513800e-12	5.015333e-13
10	206208_at	218660_at	NM_003494	DYSF	0.753963	1.254186e-16	5.798602e-12	5.798602e-13
11	206208_at	212625_at	NM_003765	STX10	0.749289	2.446415e-16	1.131076e-11	1.028251e-12
12	206209_s_at	229770_at	AI041543	GLT1D1	0.748364	2.787358e-16	1.288707e-11	1.073922e-12
13	206209_s_at	206464_at	NM_001721	BMX	0.747577	3.113538e-16	1.439513e-11	1.107318e-12
14	206208_at	207677_s_at	NM_013416	NCF4	0.747240	3.263950e-16	1.509055e-11	1.077896e-12
15	206208_at	209215_at	L11669	MFSD10	0.744748	4.617548e-16	2.134877e-11	1.423252e-12
16	206208_at	208018_s_at	NM_002110	HCK	0.742460	6.327234e-16	2.925333e-11	1.828333e-12
17	206209_s_at	205640_at	NM_000694	ALDH3B1	0.739354	9.652744e-16	4.462850e-11	2.625206e-12
18	206208_at	200660_at	NM_005620	S100A11	0.738995	1.013266e-15	4.684732e-11	2.602629e-12
19	206208_at	202545_at	NM_006254	PRKCD	0.733154	2.203766e-15	1.018889e-10	5.362575e-12
20	206208_at	221666_s_at	BC004470	PYCARD	0.731946	2.581387e-15	1.193478e-10	5.967392e-12
21	206208_at	205627_at	NM_001785	CDA	0.731288	2.812704e-15	1.300425e-10	6.192502e-12
22	206208_at	211178_s_at	AF038602	PSTPIP1	0.728846	3.859197e-15	1.784261e-10	8.110278e-12
23	206209_s_at	221666_s_at	BC004470	PYCARD	0.728177	4.205995e-15	1.944600e-10	8.454782e-12
24	206208_at	200678_x_at	NM_002087	GRN	0.725161	6.179701e-15	2.857123e-10	1.190468e-11
25	206208_at	205936_s_at	NM_002115	HK3	0.725026	6.285858e-15	2.906204e-10	1.162481e-11
26	206208_at	206464_at	NM_001721	BMX	0.725017	6.292946e-15	2.909480e-10	1.119031e-11
27	206208_at	1553723_at	NM_170776	GPR97	0.722438	8.708049e-15	4.026079e-10	1.491141e-11
28	206208_at	208749_x_at	AF085357	FLOT1	0.720225	1.147469e-14	5.305207e-10	1.894717e-11
29	206208_at	218282_at	NM_018217	EDEM2	0.720149	1.158233e-14	5.354974e-10	1.846543e-11
30	206208_at	204034_at	NM_014297	ETHE1	0.719597	1.240247e-14	5.734158e-10	1.911386e-11
31	206208_at	209083_at	U34690	CORO1A	0.718023	1.505779e-14	6.961820e-10	2.245748e-11
32	206208_at	1553297_a_at	NM_172313	CSF3R	0.716828	1.743386e-14	8.060373e-10	2.518867e-11
33	206209_s_at	226219_at	AW575123	ARHGAP30	0.716476	1.820043e-14	8.414785e-10	2.549935e-11
34	206208_at	203591_s_at	NM_000760	CSF3R	0.715509	2.047353e-14	9.465734e-10	2.784039e-11
35	206208_at	202700_s_at	NM_014698	TMEM63A	0.714487	2.317609e-14	1.071523e-9	3.061495e-11
36	206208_at	235816_s_at	AI867408	RGL4	0.714461	2.325073e-14	1.074974e-9	2.986040e-11
37	206208_at	209498_at	X16354	CEACAM1	0.714097	2.429670e-14	1.123333e-9	3.036036e-11
38	206208_at	228648_at	AA622495	LRG1	0.713092	2.742695e-14	1.268058e-9	3.336994e-11
39	206208_at	243099_at	AW271350	NFAM1	0.712568	2.920801e-14	1.350403e-9	3.462572e-11
40	206209_s_at	241742_at	AW027174	PRAM1	0.711069	3.494802e-14	1.615787e-9	4.039467e-11
41	206208_at	210142_x_at	AF117234	FLOT1	0.709395	4.264071e-14	1.971451e-9	4.808416e-11
42	206208_at	216041_x_at	AK023348	GRN	0.709222	4.352037e-14	2.012121e-9	4.790764e-11
43	206208_at	1552977_a_at	NM_006586	CNPY3	0.709217	4.354836e-14	2.013415e-9	4.682360e-11
44	206208_at	201118_at	NM_002631	PGD	0.706288	6.145958e-14	2.841522e-9	6.458005e-11
45	206208_at	223024_at	AL562950	AP1M1	0.705579	6.676363e-14	3.086750e-9	6.859444e-11
46	206208_at	225129_at	AW170571	CPNE2	0.704374	7.681113e-14	3.551286e-9	7.720187e-11
47	206208_at	202896_s_at	NM_004648	SIRPA	0.703248	8.749469e-14	4.045230e-9	8.606871e-11
48	206208_at	217931_at	BC004423	CNPY3	0.700534	1.194863e-13	5.524329e-9	1.150902e-10
49	206208_at	220005_at	NM_023914	P2RY13	0.697959	1.600716e-13	7.400752e-9	1.510358e-10
50	206208_at	210140_at	AF031824	CST7	0.697875	1.615975e-13	7.471299e-9	1.494260e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation