[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5376	205247_at	AI743713	NOTCH4		notch 4

Fetching correlation data, please wait...
Getting list of correlations for id 5376.
Getting list of p-values for id 5376.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.239 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205247_at	222101_s_at	BF222893	DCHS1	0.716852	1.738332e-14	4.018502e-10	4.018502e-10
2	205247_at	204468_s_at	NM_005424	TIE1	0.640470	5.356784e-11	1.238328e-6	6.191639e-7
3	205247_at	220349_s_at	NM_022759	ENGASE	0.630615	1.286720e-10	2.974510e-6	9.915032e-7
4	205247_at	225949_at	N21030	NRBP2	0.629501	1.418005e-10	3.278002e-6	8.195006e-7
5	205247_at	219689_at	NM_020163	SEMA3G	0.620266	3.125532e-10	7.225292e-6	1.445058e-6
6	205247_at	223939_at	AF348078	SUCNR1	-0.616921	4.135215e-10	9.559377e-6	1.593229e-6
7	205247_at	38918_at	AF083105	SOX13	0.606487	9.698371e-10	2.241972e-5	3.202818e-6
8	205247_at	219091_s_at	NM_024756	MMRN2	0.598688	1.797871e-9	4.156138e-5	5.195172e-6
9	205247_at	212070_at	AL554008	GPR56	0.593586	2.668676e-9	6.169177e-5	6.854642e-6
10	205247_at	226198_at	AV751731	TOM1L2	0.592359	2.931609e-9	6.777000e-5	6.777000e-6
11	205247_at	239277_at	AI559696		0.590902	3.276001e-9	7.573131e-5	6.884665e-6
12	205247_at	214679_x_at	AL110227	GNA11	0.586636	4.520431e-9	1.044988e-4	8.708235e-6
13	205247_at	45288_at	AA209239	ABHD6	0.581199	6.769060e-9	1.564804e-4	1.203695e-5
14	205247_at	218471_s_at	NM_024649	BBS1	0.578424	8.294750e-9	1.917497e-4	1.369641e-5
15	205247_at	209311_at	D87461	BCL2L2	0.577501	8.870991e-9	2.050707e-4	1.367138e-5
16	205247_at	212775_at	AI978623	OBSL1	0.577451	8.903194e-9	2.058151e-4	1.286345e-5
17	205247_at	213573_at	AA861608	KPNB1	0.574245	1.122463e-8	2.594798e-4	1.526352e-5
18	205247_at	225147_at	AL521959	CYTH3	0.571670	1.349667e-8	3.120025e-4	1.733347e-5
19	205247_at	217849_s_at	NM_006035	CDC42BPB	0.567223	1.848625e-8	4.273466e-4	2.249193e-5
20	205247_at	203238_s_at	NM_000435	NOTCH3	0.566628	1.927466e-8	4.455723e-4	2.227861e-5
21	205247_at	231991_at	BF970287	C20orf160	0.565686	2.058753e-8	4.759219e-4	2.266295e-5
22	205247_at	45297_at	AI417917	EHD2	0.561199	2.810258e-8	6.496474e-4	2.952943e-5
23	205247_at	216264_s_at	X79683	LAMB2	0.560976	2.853730e-8	6.596968e-4	2.868247e-5
24	205247_at	218546_at	NM_024709	C1orf115	0.558603	3.357494e-8	7.761520e-4	3.233967e-5
25	205247_at	223132_s_at	AF220034	TRIM8	0.554699	4.375049e-8	1.011380e-3	4.045520e-5
26	205247_at	241816_at	AW103300	C14orf106	-0.553956	4.599370e-8	1.063236e-3	4.089371e-5
27	205247_at	222243_s_at	AB051450	TOB2	0.553864	4.628129e-8	1.069885e-3	3.962535e-5
28	205247_at	213058_at	AL033538	TTC28	0.551724	5.340887e-8	1.234653e-3	4.409474e-5
29	205247_at	225855_at	AB046768	EPB41L5	0.550616	5.749939e-8	1.329213e-3	4.583495e-5
30	205247_at	218224_at	NM_006029	PNMA1	0.549349	6.254293e-8	1.445805e-3	4.819349e-5
31	205247_at	218466_at	NM_024682	TBC1D17	0.548925	6.432224e-8	1.486937e-3	4.796571e-5
32	205247_at	223315_at	AF278532	NTN4	0.547251	7.183028e-8	1.660500e-3	5.189064e-5
33	205247_at	212074_at	BE972774		0.546858	7.370965e-8	1.703946e-3	5.163473e-5
34	205247_at	213069_at	AI148659	HEG1	0.546645	7.474564e-8	1.727895e-3	5.082044e-5
35	205247_at	226145_s_at	AL157471	FRAS1	0.546216	7.687939e-8	1.777221e-3	5.077774e-5
36	205247_at	219165_at	NM_021630	PDLIM2	0.544873	8.393827e-8	1.940401e-3	5.390003e-5
37	205247_at	231098_at	BF939996		0.544511	8.594396e-8	1.986767e-3	5.369639e-5
38	205247_at	212647_at	NM_006270	RRAS	0.543396	9.240816e-8	2.136199e-3	5.621577e-5
39	205247_at	229302_at	AA058832	TMEM178	0.540961	1.081742e-7	2.500663e-3	6.411957e-5
40	205247_at	209087_x_at	AF089868	MCAM	0.540475	1.116104e-7	2.580097e-3	6.450242e-5
41	205247_at	40149_at	AL049924	SH2B1	0.539655	1.176473e-7	2.719653e-3	6.633300e-5
42	205247_at	201471_s_at	NM_003900	SQSTM1	0.539264	1.206311e-7	2.788629e-3	6.639593e-5
43	205247_at	219064_at	NM_030569	ITIH5	0.538581	1.260258e-7	2.913339e-3	6.775206e-5
44	205247_at	202801_at	NM_002730	PRKACA	0.536833	1.408821e-7	3.256772e-3	7.401755e-5
45	205247_at	229265_at	AA927480	SKI	0.535955	1.489557e-7	3.443408e-3	7.652017e-5
46	205247_at	204547_at	NM_006822	RAB40B	0.535854	1.499115e-7	3.465503e-3	7.533703e-5
47	205247_at	205005_s_at	AW293531	NMT2	0.535594	1.524005e-7	3.523043e-3	7.495837e-5
48	205247_at	224811_at	BF112093	LPP	0.532979	1.797150e-7	4.154473e-3	8.655152e-5
49	205247_at	206481_s_at	NM_001290	LDB2	0.532025	1.907954e-7	4.410616e-3	9.001258e-5
50	205247_at	221529_s_at	AF326591	PLVAP	0.532022	1.908274e-7	4.411356e-3	8.822713e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation