[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4018	203238_s_at	NM_000435	NOTCH3		notch 3

Fetching correlation data, please wait...
Getting list of correlations for id 4018.
Getting list of p-values for id 4018.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.140 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203238_s_at	205717_x_at	NM_002588		0.850992	1.194129e-24	2.760468e-20	2.760468e-20
2	203238_s_at	209079_x_at	AF152318		0.844163	6.493381e-24	1.501075e-19	7.505374e-20
3	203238_s_at	215836_s_at	AK026188		0.837451	3.175135e-23	7.339960e-19	2.446653e-19
4	203238_s_at	207191_s_at	NM_005545	ISLR	0.830848	1.412512e-22	3.265304e-18	8.163260e-19
5	203238_s_at	226198_at	AV751731	TOM1L2	0.824531	5.553370e-22	1.283773e-17	2.567545e-18
6	203238_s_at	216264_s_at	X79683	LAMB2	0.818130	2.104614e-21	4.865235e-17	8.108725e-18
7	203238_s_at	202328_s_at	NM_000296	PKD1	0.814664	4.238216e-21	9.797483e-17	1.399640e-17
8	203238_s_at	202409_at	X07868		0.806036	2.274678e-20	5.258373e-16	6.572967e-17
9	203238_s_at	210825_s_at	AF130103	PEBP1	0.804121	3.265906e-20	7.549796e-16	8.388662e-17
10	203238_s_at	208789_at	BC004295	PTRF	0.798817	8.711395e-20	2.013813e-15	2.013813e-16
11	203238_s_at	221529_s_at	AF326591	PLVAP	0.796329	1.366439e-19	3.158796e-15	2.871633e-16
12	203238_s_at	38918_at	AF083105	SOX13	0.793699	2.184475e-19	5.049850e-15	4.208209e-16
13	203238_s_at	212775_at	AI978623	OBSL1	0.791183	3.400449e-19	7.860818e-15	6.046783e-16
14	203238_s_at	218175_at	NM_025140	CCDC92	0.786624	7.467292e-19	1.726214e-14	1.233010e-15
15	203238_s_at	201655_s_at	M85289	HSPG2	0.786459	7.679940e-19	1.775372e-14	1.183581e-15
16	203238_s_at	202801_at	NM_002730	PRKACA	0.779986	2.269406e-18	5.246186e-14	3.278867e-15
17	203238_s_at	226377_at	AI093722		0.779673	2.389085e-18	5.522848e-14	3.248734e-15
18	203238_s_at	207390_s_at	NM_006932	SMTN	0.778746	2.780961e-18	6.428747e-14	3.571526e-15
19	203238_s_at	213422_s_at	AW888223	MXRA8	0.776024	4.326869e-18	1.000242e-13	5.264433e-15
20	203238_s_at	211066_x_at	BC006439		0.769792	1.163126e-17	2.688797e-13	1.344399e-14
21	203238_s_at	211958_at	R73554	IGFBP5	0.767982	1.541120e-17	3.562608e-13	1.696480e-14
22	203238_s_at	219922_s_at	NM_021070	LTBP3	0.766520	1.930879e-17	4.463613e-13	2.028915e-14
23	203238_s_at	214679_x_at	AL110227	GNA11	0.765641	2.209274e-17	5.107180e-13	2.220513e-14
24	203238_s_at	205547_s_at	NM_003186	TAGLN	0.764346	2.691725e-17	6.222461e-13	2.592692e-14
25	203238_s_at	37005_at	D28124	NBL1	0.761557	4.101098e-17	9.480509e-13	3.792204e-14
26	203238_s_at	209156_s_at	AY029208	COL6A2	0.761537	4.112932e-17	9.507865e-13	3.656871e-14
27	203238_s_at	201058_s_at	NM_006097	MYL9	0.761383	4.208991e-17	9.729925e-13	3.603676e-14
28	203238_s_at	212169_at	AL050187	FKBP9	0.759458	5.608269e-17	1.296463e-12	4.630227e-14
29	203238_s_at	201828_x_at	NM_003928	FAM127A	0.756739	8.374028e-17	1.935824e-12	6.675255e-14
30	203238_s_at	45297_at	AI417917	EHD2	0.753854	1.274098e-16	2.945333e-12	9.817775e-14
31	203238_s_at	202796_at	NM_007286	SYNPO	0.753585	1.324600e-16	3.062077e-12	9.877667e-14
32	203238_s_at	209356_x_at	AB030655	EFEMP2	0.752985	1.444216e-16	3.338593e-12	1.043310e-13
33	203238_s_at	1557938_s_at	AL545542	PTRF	0.751276	1.845008e-16	4.265105e-12	1.292456e-13
34	203238_s_at	220975_s_at	NM_030968	C1QTNF1	0.750772	1.982252e-16	4.582372e-12	1.347756e-13
35	203238_s_at	201508_at	NM_001552	IGFBP4	0.750049	2.196836e-16	5.078426e-12	1.450979e-13
36	203238_s_at	226722_at	BE874872	FAM20C	0.744850	4.552709e-16	1.052450e-11	2.923471e-13
37	203238_s_at	209651_at	BC001830	TGFB1I1	0.744612	4.705527e-16	1.087777e-11	2.939937e-13
38	203238_s_at	211964_at	X05610	COL4A2	0.743676	5.354256e-16	1.237743e-11	3.257220e-13
39	203238_s_at	45714_at	AA436930	HCFC1R1	0.742375	6.401925e-16	1.479933e-11	3.794700e-13
40	203238_s_at	1555724_s_at	BC010946	TAGLN	0.739903	8.962761e-16	2.071922e-11	5.179804e-13
41	203238_s_at	227325_at	AW172584	PRR24	0.739537	9.417547e-16	2.177054e-11	5.309889e-13
42	203238_s_at	211986_at	BG287862	AHNAK	0.736478	1.419750e-15	3.282037e-11	7.814373e-13
43	203238_s_at	204735_at	NM_006202	PDE4A	0.731330	2.797535e-15	6.467063e-11	1.503968e-12
44	203238_s_at	212566_at	AL523310	MAP4	0.730815	2.991312e-15	6.915017e-11	1.571595e-12
45	203238_s_at	201431_s_at	NM_001387	DPYSL3	0.729945	3.348684e-15	7.741153e-11	1.720256e-12
46	203238_s_at	203657_s_at	NM_003793	CTSF	0.729885	3.374756e-15	7.801422e-11	1.695961e-12
47	203238_s_at	213428_s_at	AA292373	COL6A1	0.729123	3.723881e-15	8.608496e-11	1.831595e-12
48	203238_s_at	221016_s_at	NM_031283	TCF7L1	0.727168	4.786187e-15	1.106423e-10	2.305048e-12
49	203238_s_at	225147_at	AL521959	CYTH3	0.724974	6.327628e-15	1.462758e-10	2.985220e-12
50	203238_s_at	219315_s_at	NM_024600	TMEM204	0.723839	7.303554e-15	1.688362e-10	3.376725e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation