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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5194	204908_s_at	NM_005178	BCL3		B-cell CLL/lymphoma 3

Fetching correlation data, please wait...
Getting list of correlations for id 5194.
Getting list of p-values for id 5194.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.159 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204908_s_at	202193_at	NM_005569	LIMK2	0.665014	5.233875e-12	1.209915e-7	1.209915e-7
2	204908_s_at	203233_at	NM_000418	IL4R	0.641162	5.030965e-11	1.163008e-6	5.815041e-7
3	204908_s_at	38290_at	AF037195	RGS14	0.621667	2.776897e-10	6.419353e-6	2.139784e-6
4	204908_s_at	205708_s_at	AI051254	TRPM2	0.609328	7.713175e-10	1.783055e-5	4.457637e-6
5	204908_s_at	1729_at	L41690	TRADD	0.601888	1.398424e-9	3.232737e-5	6.465474e-6
6	204908_s_at	218018_at	AW449022	PDXK	0.600416	1.570405e-9	3.630306e-5	6.050510e-6
7	204908_s_at	227558_at	AI570531	CBX4	0.599168	1.731792e-9	4.003383e-5	5.719118e-6
8	204908_s_at	45526_g_at	AI246641	NAT15	0.598630	1.806051e-9	4.175047e-5	5.218809e-6
9	204908_s_at	212948_at	AB020716	CAMTA2	0.598155	1.874256e-9	4.332717e-5	4.814130e-6
10	204908_s_at	229373_at	AW139719		0.596305	2.164034e-9	5.002599e-5	5.002599e-6
11	204908_s_at	227677_at	BF512748	JAK3	0.594120	2.561346e-9	5.921064e-5	5.382786e-6
12	204908_s_at	222537_s_at	W44413	CDC42SE1	0.586325	4.626983e-9	1.069620e-4	8.913497e-6
13	204908_s_at	240064_at	AI738675		0.577110	9.126529e-9	2.109780e-4	1.622908e-5
14	204908_s_at	225037_at	AL518563	SLC35C2	0.572888	1.237247e-8	2.860144e-4	2.042960e-5
15	204908_s_at	228869_at	AI081246		0.570380	1.479366e-8	3.419851e-4	2.279901e-5
16	204908_s_at	239311_at	AI367034		0.570106	1.508384e-8	3.486932e-4	2.179333e-5
17	204908_s_at	204336_s_at	NM_005873	RGS19	0.569219	1.606078e-8	3.712770e-4	2.183982e-5
18	204908_s_at	204470_at	NM_001511	CXCL1	0.564121	2.295887e-8	5.307402e-4	2.948557e-5
19	204908_s_at	212860_at	BG168720	ZDHHC18	0.562566	2.557299e-8	5.911709e-4	3.111426e-5
20	204908_s_at	206209_s_at	NM_000717	CA4	0.560520	2.944567e-8	6.806956e-4	3.403478e-5
21	204908_s_at	223201_s_at	AW205122	TMEM164	0.559071	3.251778e-8	7.517135e-4	3.579588e-5
22	204908_s_at	228585_at	AI301948	ENTPD1	0.559022	3.262726e-8	7.542443e-4	3.428383e-5
23	204908_s_at	220987_s_at	NM_030952		0.557796	3.547253e-8	8.200185e-4	3.565298e-5
24	204908_s_at	221485_at	AL035683	B4GALT5	0.557749	3.558770e-8	8.226809e-4	3.427837e-5
25	204908_s_at	212457_at	AL161985	TFE3	0.557724	3.564805e-8	8.240759e-4	3.296304e-5
26	204908_s_at	228648_at	AA622495	LRG1	0.557345	3.657821e-8	8.455784e-4	3.252225e-5
27	204908_s_at	40420_at	AB015718	STK10	0.556161	3.963781e-8	9.163074e-4	3.393731e-5
28	204908_s_at	227698_s_at	AW007215	RAB40C	0.552263	5.152095e-8	1.191010e-3	4.253606e-5
29	204908_s_at	202329_at	NM_004383	CSK	0.552069	5.219393e-8	1.206567e-3	4.160576e-5
30	204908_s_at	218130_at	NM_024510	C17orf62	0.551965	5.255659e-8	1.214951e-3	4.049836e-5
31	204908_s_at	204197_s_at	NM_004350	RUNX3	0.550831	5.668346e-8	1.310352e-3	4.226940e-5
32	204908_s_at	204169_at	NM_000883	IMPDH1	0.549489	6.196707e-8	1.432493e-3	4.476540e-5
33	204908_s_at	210146_x_at	AF004231	LILRB2	0.549376	6.243358e-8	1.443277e-3	4.373567e-5
34	204908_s_at	50221_at	AI524138	TFEB	0.548376	6.670005e-8	1.541905e-3	4.535015e-5
35	204908_s_at	213700_s_at	AA554945		0.548099	6.792727e-8	1.570275e-3	4.486499e-5
36	204908_s_at	202391_at	NM_006317	BASP1	0.547236	7.189989e-8	1.662110e-3	4.616972e-5
37	204908_s_at	1552263_at	NM_138957	MAPK1	0.547205	7.204541e-8	1.665474e-3	4.501280e-5
38	204908_s_at	31845_at	U32645	ELF4	0.545466	8.074882e-8	1.866671e-3	4.912291e-5
39	204908_s_at	223767_at	AF237762	GPR84	0.544758	8.457094e-8	1.955026e-3	5.012888e-5
40	204908_s_at	224976_at	R37335	NFIA	-0.542446	9.827967e-8	2.271931e-3	5.679828e-5
41	204908_s_at	1552553_a_at	NM_021209	NLRC4	0.541132	1.069826e-7	2.473116e-3	6.031990e-5
42	204908_s_at	233072_at	AI348745	NTNG2	0.541014	1.077992e-7	2.491995e-3	5.933322e-5
43	204908_s_at	217718_s_at	NM_014052	YWHAB	0.540616	1.106040e-7	2.556832e-3	5.946121e-5
44	204908_s_at	224414_s_at	AF356193	CARD6	0.537729	1.330669e-7	3.076107e-3	6.991153e-5
45	204908_s_at	46323_at	AL120741	CANT1	0.536350	1.452697e-7	3.358200e-3	7.462667e-5
46	204908_s_at	226659_at	Z97832	DEF6	0.534846	1.597825e-7	3.693693e-3	8.029767e-5
47	204908_s_at	1556762_a_at	AI057305		0.533347	1.756060e-7	4.059483e-3	8.637198e-5
48	204908_s_at	241742_at	AW027174	PRAM1	0.532563	1.844719e-7	4.264437e-3	8.884243e-5
49	204908_s_at	219053_s_at	NM_017966	VPS37C	0.531782	1.937174e-7	4.478165e-3	9.139112e-5
50	204908_s_at	202464_s_at	NM_004566	PFKFB3	0.528841	2.326316e-7	5.377744e-3	1.075549e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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