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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4977	204531_s_at	NM_007295	BRCA1		breast cancer 1, early onset
8261	211851_x_at	AF005068	BRCA1		breast cancer 1, early onset

Fetching correlation data, please wait...
Getting list of correlations for id 4977.
Getting list of p-values for id 4977.
1 of 2 done.
Getting list of correlations for id 8261.
Getting list of p-values for id 8261.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.210 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204531_s_at	1555844_s_at	AL713781	HNRNPM	0.737193	1.290585e-15	5.966888e-11	5.966888e-11
2	204531_s_at	213090_s_at	AI744029	TAF4	0.700045	1.263314e-13	5.840806e-9	2.920403e-9
3	204531_s_at	209326_at	D84454	SLC35A2	0.690374	3.721584e-13	1.720637e-8	5.735456e-9
4	204531_s_at	228963_at	BE856028	RSBN1L	0.684626	6.935426e-13	3.206525e-8	8.016312e-9
5	204531_s_at	224504_s_at	BC006350	BUD13	0.678244	1.361699e-12	6.295681e-8	1.259136e-8
6	204531_s_at	205449_at	NM_013299	SAC3D1	0.665653	4.912019e-12	2.271023e-7	3.785038e-8
7	204531_s_at	202360_at	NM_014757	MAML1	0.664879	5.304017e-12	2.452259e-7	3.503228e-8
8	204531_s_at	202215_s_at	NM_014223	NFYC	0.664751	5.372080e-12	2.483727e-7	3.104659e-8
9	204531_s_at	212781_at	AK026954	RBBP6	0.664013	5.779215e-12	2.671962e-7	2.968847e-8
10	204531_s_at	205482_x_at	NM_013306	SNX15	0.663879	5.855686e-12	2.707318e-7	2.707318e-8
11	204531_s_at	201515_s_at	NM_004622	TSN	0.660391	8.246101e-12	3.812502e-7	3.465911e-8
12	204531_s_at	212248_at	AI886796	MTDH	0.660380	8.254451e-12	3.816363e-7	3.180302e-8
13	204531_s_at	203062_s_at	NM_014641	MDC1	0.659088	9.359858e-12	4.327437e-7	3.328797e-8
14	204531_s_at	203625_x_at	BG105365	SKP2	0.658890	9.541141e-12	4.411251e-7	3.150894e-8
15	204531_s_at	233167_at	BC001099	SELO	0.655186	1.362800e-11	6.300771e-7	4.200514e-8
16	204531_s_at	230407_at	AW440490	SBNO1	0.654620	1.438365e-11	6.650135e-7	4.156334e-8
17	204531_s_at	212051_at	AA676803	WIPF2	0.654288	1.484667e-11	6.864211e-7	4.037771e-8
18	204531_s_at	228597_at	AW151538	C21orf45	0.654171	1.501358e-11	6.941378e-7	3.856321e-8
19	204531_s_at	31845_at	U32645	ELF4	0.653999	1.526148e-11	7.055992e-7	3.713680e-8
20	204531_s_at	209161_at	AI184802	PRPF4	0.652797	1.710554e-11	7.908576e-7	3.954288e-8
21	204531_s_at	223274_at	BC002493	TCF19	0.652537	1.753248e-11	8.105965e-7	3.859983e-8
22	204531_s_at	206003_at	NM_014645	CEP135	0.649423	2.350178e-11	1.086581e-6	4.939006e-8
23	204531_s_at	1558750_a_at	BG109249	LOC100288693	0.643671	4.002323e-11	1.850434e-6	8.045365e-8
24	204531_s_at	209271_at	AB032251	BPTF	0.643643	4.012632e-11	1.855200e-6	7.730001e-8
25	204531_s_at	224598_at	BF570193	MGAT4B	0.642644	4.396482e-11	2.032670e-6	8.130679e-8
26	204531_s_at	225916_at	AA789302	ZNF131	0.641897	4.706216e-11	2.175872e-6	8.368738e-8
27	204531_s_at	227586_at	AV699843	TMEM170A	0.641406	4.920845e-11	2.275103e-6	8.426309e-8
28	204531_s_at	212787_at	AI952986	YLPM1	0.637277	7.140136e-11	3.301171e-6	1.178989e-7
29	204531_s_at	222523_at	BE622841	SENP2	0.635450	8.403252e-11	3.885159e-6	1.339710e-7
30	204531_s_at	204473_s_at	NM_014630	ZNF592	0.635445	8.407065e-11	3.886922e-6	1.295641e-7
31	204531_s_at	217788_s_at	NM_004481	GALNT2	0.634732	8.956468e-11	4.140934e-6	1.335785e-7
32	204531_s_at	216457_s_at	AK026080	SF3A1	0.634430	9.199540e-11	4.253315e-6	1.329161e-7
33	204531_s_at	223931_s_at	AF170724	CHFR	0.633159	1.029335e-10	4.759025e-6	1.442129e-7
34	204531_s_at	1553138_a_at	NM_152363	ANKLE1	0.632285	1.111618e-10	5.139457e-6	1.511605e-7
35	204531_s_at	203291_at	NM_013316	CNOT4	0.632069	1.132863e-10	5.237677e-6	1.496479e-7
36	204531_s_at	227768_at	AB051490	ZNF407	0.629969	1.361352e-10	6.294076e-6	1.748354e-7
37	204531_s_at	209330_s_at	D55674	HNRNPD	0.628774	1.510368e-10	6.983036e-6	1.887307e-7
38	204531_s_at	211375_s_at	AF141870	ILF3	0.628424	1.556913e-10	7.198230e-6	1.894271e-7
39	204531_s_at	225456_at	AI708776	MED1	0.627962	1.620508e-10	7.492255e-6	1.921091e-7
40	204531_s_at	228164_at	BE964704	AP4E1	0.625490	2.005089e-10	9.270327e-6	2.317582e-7
41	204531_s_at	210053_at	AW138827	TAF5	0.624858	2.116681e-10	9.786263e-6	2.386893e-7
42	204531_s_at	203298_s_at	NM_004973	JARID2	0.624791	2.128730e-10	9.841972e-6	2.343327e-7
43	204531_s_at	229342_at	AI708256		0.623401	2.396823e-10	1.108147e-5	2.577086e-7
44	204531_s_at	219919_s_at	NM_018276	SSH3	0.623343	2.408866e-10	1.113715e-5	2.531171e-7
45	204531_s_at	226952_at	AU149385	EAF1	0.622793	2.524013e-10	1.166952e-5	2.593227e-7
46	204531_s_at	218081_at	NM_017874	C20orf27	0.621757	2.755875e-10	1.274151e-5	2.769894e-7
47	204531_s_at	213857_s_at	BG230614	CD47	0.619603	3.304729e-10	1.527908e-5	3.250869e-7
48	204531_s_at	208617_s_at	AF208850	PTP4A2	0.619086	3.451217e-10	1.595636e-5	3.324241e-7
49	211851_x_at	242681_at	BF516038		0.618154	3.731240e-10	1.725101e-5	3.520615e-7
50	204531_s_at	1552257_a_at	NM_015140	TTLL12	0.618118	3.742517e-10	1.730315e-5	3.460631e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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