[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5773	206110_at	NM_003536	HIST1H3H		histone cluster 1, H3h

Fetching correlation data, please wait...
Getting list of correlations for id 5773.
Getting list of p-values for id 5773.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.131 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	206110_at	230192_at	AI472310	TRIM13	0.484947	2.941957e-6	6.800923e-2	6.800923e-2
2	206110_at	214440_at	NM_000662	NAT1	0.482268	3.396737e-6	7.852237e-2	3.926118e-2
3	206110_at	222685_at	AB046794	HAUS6	0.475978	4.737662e-6	1.095205e-1	3.650684e-2
4	206110_at	224956_at	AI743689	NUFIP2	0.465884	7.972017e-6	1.842891e-1	4.607228e-2
5	206110_at	210387_at	BC001131		0.465590	8.091822e-6	1.870586e-1	3.741173e-2
6	206110_at	244389_at	AU145538	TLK1	0.462323	9.540901e-6	2.205570e-1	3.675950e-2
7	206110_at	1555193_a_at	BC020626	ZNF277	0.453231	1.495986e-5	3.458270e-1	4.940386e-2
8	206110_at	214821_at	AF052119	SLC25A4	-0.453171	1.500367e-5	3.468399e-1	4.335499e-2
9	206110_at	228281_at	BF343258	C11orf82	0.448255	1.903305e-5	4.399871e-1	4.888745e-2
10	206110_at	217640_x_at	BF038461	SKA1	0.443648	2.370712e-5	5.480375e-1	5.480375e-2
11	206110_at	235363_at	BF108778		0.439054	2.941855e-5	6.800687e-1	6.182443e-2
12	206110_at	204603_at	NM_003686	EXO1	0.435252	3.508995e-5	8.111743e-1	6.759786e-2
13	206110_at	222631_at	AI862887	PI4K2B	0.434909	3.564868e-5	8.240905e-1	6.339158e-2
14	206110_at	1557137_at	AA084725	TMEM17	0.431517	4.164141e-5	9.626245e-1	6.875889e-2
15	206110_at	230051_at	BF589207	C10orf47	0.430924	4.277972e-5	9.889387e-1	6.592925e-2
16	206110_at	215071_s_at	AL353759	HIST1H2AC	0.430858	4.290908e-5	9.919291e-1	6.199557e-2
17	206110_at	214804_at	BF793446	CENPI	0.430618	4.337975e-5	1.002810e+0	5.898881e-2
18	206110_at	213063_at	BF970253		0.428507	4.773027e-5	1.103381e+0	6.129892e-2
19	206110_at	235232_at	AI061377	GMEB1	0.428445	4.786333e-5	1.106457e+0	5.823456e-2
20	206110_at	235512_at	AW976363	CDKL1	0.428289	4.820200e-5	1.114286e+0	5.571428e-2
21	206110_at	209804_at	D42045	DCLRE1A	0.428145	4.851522e-5	1.121526e+0	5.340602e-2
22	206110_at	219292_at	NM_018105	THAP1	0.426954	5.118735e-5	1.183298e+0	5.378627e-2
23	206110_at	237289_at	AW593801	CREB1	0.424526	5.705964e-5	1.319048e+0	5.734990e-2
24	206110_at	212255_s_at	AK001684	ATP2C1	0.423547	5.960133e-5	1.377804e+0	5.740850e-2
25	206110_at	221559_s_at	BC000229	MIS12	0.422343	6.287039e-5	1.453375e+0	5.813499e-2
26	206110_at	227658_s_at	BE550332	PLEKHA3	0.417183	7.885539e-5	1.822900e+0	7.011154e-2
27	206110_at	219008_at	NM_021925	C2orf43	0.417176	7.888236e-5	1.823524e+0	6.753791e-2
28	206110_at	203087_s_at	NM_004520	KIF2A	0.416980	7.955648e-5	1.839107e+0	6.568240e-2
29	206110_at	205442_at	NM_021647	MFAP3L	0.415737	8.397216e-5	1.941184e+0	6.693740e-2
30	206110_at	236769_at	BE504242	LOC158402	0.415621	8.439500e-5	1.950959e+0	6.503197e-2
31	206110_at	222192_s_at	AK021672	C2orf43	0.415446	8.503600e-5	1.965777e+0	6.341217e-2
32	206110_at	208838_at	AB020636	CAND1	0.414784	8.750735e-5	2.022907e+0	6.321585e-2
33	206110_at	224319_s_at	AL136768	SMCR7L	0.414698	8.783312e-5	2.030438e+0	6.152843e-2
34	206110_at	213365_at	N64622	ERI2	0.414588	8.825260e-5	2.040135e+0	6.000398e-2
35	206110_at	224200_s_at	AB035274	RAD18	0.413250	9.349021e-5	2.161213e+0	6.174895e-2
36	206110_at	1553167_a_at	BC023539	SEPSECS	0.413149	9.389684e-5	2.170613e+0	6.029481e-2
37	206110_at	216228_s_at	AK001538	WDHD1	0.412947	9.471612e-5	2.189553e+0	5.917710e-2
38	206110_at	223569_at	AF212238	PPAPDC1B	0.411084	1.025906e-4	2.371586e+0	6.241015e-2
39	206110_at	226948_at	AI795923	RHBDD1	0.410564	1.048926e-4	2.424801e+0	6.217440e-2
40	206110_at	229181_s_at	AI248305	HAUS2	0.410012	1.073863e-4	2.482448e+0	6.206120e-2
41	206110_at	230047_at	BF439533	ARHGAP42	0.410006	1.074145e-4	2.483101e+0	6.056344e-2
42	206110_at	218929_at	NM_017632	CDKN2AIP	0.409947	1.076844e-4	2.489340e+0	5.927000e-2
43	206110_at	228195_at	BE645119	C2orf88	0.408801	1.130578e-4	2.613556e+0	6.078038e-2
44	206110_at	239835_at	AA669114	KBTBD8	0.407577	1.190724e-4	2.752597e+0	6.255901e-2
45	206110_at	213253_at	AU154486	SMC2	0.407476	1.195809e-4	2.764352e+0	6.143005e-2
46	206110_at	202064_s_at	AF052059	SEL1L	0.407180	1.210839e-4	2.799097e+0	6.084993e-2
47	206110_at	235025_at	AW196959	WDR89	0.406040	1.270436e-4	2.936866e+0	6.248652e-2
48	206110_at	235885_at	AA810452	P2RY12	0.405715	1.287889e-4	2.977214e+0	6.202529e-2
49	206110_at	1565810_at	BQ880639		0.405593	1.294515e-4	2.992531e+0	6.107207e-2
50	206110_at	227928_at	AI224977	C12orf48	0.404254	1.369247e-4	3.165289e+0	6.330577e-2

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation