[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
11006	217640_x_at	BF038461	SKA1		spindle and kinetochore associated complex subunit 1

Fetching correlation data, please wait...
Getting list of correlations for id 11006.
Getting list of p-values for id 11006.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.146 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	217640_x_at	202697_at	NM_007006	NUDT21	0.751066	1.900911e-16	4.394337e-12	4.394337e-12
2	217640_x_at	212804_s_at	AI797397	GAPVD1	0.748840	2.606632e-16	6.025751e-12	3.012875e-12
3	217640_x_at	220651_s_at	NM_018518	MCM10	0.728296	4.142310e-15	9.575778e-11	3.191926e-11
4	217640_x_at	229097_at	AI813331	DIAPH3	0.723152	7.962204e-15	1.840623e-10	4.601556e-11
5	217640_x_at	210052_s_at	AF098158	TPX2	0.712410	2.976782e-14	6.881428e-10	1.376286e-10
6	217640_x_at	204023_at	NM_002916	RFC4	0.711381	3.367090e-14	7.783702e-10	1.297284e-10
7	217640_x_at	210573_s_at	BC004424	POLR3C	0.710327	3.817561e-14	8.825056e-10	1.260722e-10
8	217640_x_at	205548_s_at	NM_006806	BTG3	0.704760	7.344140e-14	1.697745e-9	2.122181e-10
9	217640_x_at	205085_at	NM_004153	ORC1L	0.703945	8.072063e-14	1.866019e-9	2.073354e-10
10	217640_x_at	214710_s_at	BE407516	CCNB1	0.703618	8.383339e-14	1.937976e-9	1.937976e-10
11	217640_x_at	208971_at	M14016	UROD	0.702206	9.866161e-14	2.280760e-9	2.073418e-10
12	217640_x_at	204886_at	AL043646	PLK4	0.700997	1.133250e-13	2.619734e-9	2.183111e-10
13	217640_x_at	212949_at	D38553	NCAPH	0.700600	1.185848e-13	2.741326e-9	2.108712e-10
14	217640_x_at	201014_s_at	NM_006452	PAICS	0.699169	1.395694e-13	3.226427e-9	2.304591e-10
15	217640_x_at	218622_at	NM_024057	NUP37	0.697325	1.719321e-13	3.974554e-9	2.649703e-10
16	217640_x_at	1568596_a_at	AI199355	TROAP	0.696719	1.840813e-13	4.255407e-9	2.659630e-10
17	217640_x_at	205053_at	NM_000946	PRIM1	0.696325	1.924056e-13	4.447841e-9	2.616377e-10
18	217640_x_at	235113_at	AA742244	PPIL5	0.696015	1.991962e-13	4.604818e-9	2.558232e-10
19	217640_x_at	203968_s_at	NM_001254	CDC6	0.694641	2.322692e-13	5.369367e-9	2.825983e-10
20	217640_x_at	203588_s_at	BG034328	TFDP2	0.692675	2.889088e-13	6.678704e-9	3.339352e-10
21	217640_x_at	1555758_a_at	AF213040	CDKN3	0.691296	3.363400e-13	7.775172e-9	3.702463e-10
22	217640_x_at	203432_at	AW272611	TMPO	0.691160	3.414250e-13	7.892722e-9	3.587601e-10
23	217640_x_at	203210_s_at	NM_007370	RFC5	0.690342	3.734647e-13	8.633382e-9	3.753644e-10
24	217640_x_at	202854_at	NM_000194	HPRT1	0.681934	9.238421e-13	2.135646e-8	8.898524e-10
25	217640_x_at	202705_at	NM_004701	CCNB2	0.680632	1.060035e-12	2.450484e-8	9.801936e-10
26	217640_x_at	201586_s_at	NM_005066	SFPQ	0.679862	1.149517e-12	2.657337e-8	1.022053e-9
27	217640_x_at	203764_at	NM_014750	DLGAP5	0.679789	1.158379e-12	2.677826e-8	9.917872e-10
28	217640_x_at	230556_at	AA977197	IMMP1L	0.679557	1.186842e-12	2.743624e-8	9.798656e-10
29	217640_x_at	205235_s_at	NM_016195	KIF20B	0.679550	1.187720e-12	2.745651e-8	9.467763e-10
30	217640_x_at	201499_s_at	NM_003470	USP7	0.678368	1.344206e-12	3.107401e-8	1.035800e-9
31	217640_x_at	209714_s_at	AF213033	CDKN3	0.678101	1.382295e-12	3.195450e-8	1.030790e-9
32	217640_x_at	202413_s_at	NM_003368	USP1	0.676645	1.608278e-12	3.717856e-8	1.161830e-9
33	217640_x_at	212022_s_at	BF001806	MKI67	0.676481	1.635961e-12	3.781850e-8	1.146015e-9
34	217640_x_at	213346_at	BE748563	C13orf27	0.676056	1.709564e-12	3.951998e-8	1.162352e-9
35	217640_x_at	203856_at	NM_003384	VRK1	0.675373	1.834628e-12	4.241110e-8	1.211746e-9
36	217640_x_at	218355_at	NM_012310	KIF4A	0.675335	1.841885e-12	4.257885e-8	1.182746e-9
37	217640_x_at	1555279_at	BC007934	ARMC8	0.674126	2.086103e-12	4.822444e-8	1.303363e-9
38	217640_x_at	219918_s_at	NM_018123	ASPM	0.673032	2.333475e-12	5.394295e-8	1.419551e-9
39	217640_x_at	204033_at	NM_004237	TRIP13	0.672559	2.449233e-12	5.661892e-8	1.451767e-9
40	217640_x_at	204887_s_at	NM_014264	PLK4	0.670110	3.141335e-12	7.261824e-8	1.815456e-9
41	217640_x_at	243840_at	BF691634		0.669799	3.241791e-12	7.494049e-8	1.827817e-9
42	217640_x_at	227230_s_at	BE855799	KIAA1211	0.668689	3.625474e-12	8.381007e-8	1.995478e-9
43	217640_x_at	215227_x_at	BG035989	ACP1	0.667163	4.225122e-12	9.767214e-8	2.271445e-9
44	217640_x_at	201478_s_at	U59151	DKC1	0.666097	4.699409e-12	1.086362e-7	2.469005e-9
45	217640_x_at	202533_s_at	BC003584	DHFR	0.665510	4.982270e-12	1.151751e-7	2.559448e-9
46	217640_x_at	213599_at	BE045993	OIP5	0.665506	4.983910e-12	1.152131e-7	2.504632e-9
47	217640_x_at	203746_s_at	NM_005333	HCCS	0.665354	5.060181e-12	1.169762e-7	2.488855e-9
48	217640_x_at	1553338_at	NM_152608	C1orf55	0.664206	5.669586e-12	1.310638e-7	2.730496e-9
49	217640_x_at	207828_s_at	NM_005196	CENPF	0.663392	6.144532e-12	1.420431e-7	2.898840e-9
50	217640_x_at	222781_s_at	BF590861	C9orf40	0.663239	6.237453e-12	1.441912e-7	2.883824e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation