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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4581	203967_at	U77949	CDC6		cell division cycle 6 homolog (S. cerevisiae)
4582	203968_s_at	NM_001254	CDC6		cell division cycle 6 homolog (S. cerevisiae)

Fetching correlation data, please wait...
Getting list of correlations for id 4581.
Getting list of p-values for id 4581.
1 of 2 done.
Getting list of correlations for id 4582.
Getting list of p-values for id 4582.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.192 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203968_s_at	203967_at	U77949	CDC6	0.850516	1.347299e-24	6.229102e-20	6.229102e-20
2	203967_at	203968_s_at	NM_001254	CDC6	0.850516	1.347299e-24	6.229102e-20	3.114551e-20
3	203968_s_at	217640_x_at	BF038461	SKA1	0.694641	2.322692e-13	1.073873e-8	3.579578e-9
4	203967_at	205085_at	NM_004153	ORC1L	0.692304	3.010040e-13	1.391662e-8	3.479155e-9
5	203967_at	202128_at	NM_014821	KIAA0317	0.689888	3.924980e-13	1.814675e-8	3.629351e-9
6	203968_s_at	201014_s_at	NM_006452	PAICS	0.685964	6.007402e-13	2.777462e-8	4.629104e-9
7	203967_at	243840_at	BF691634		0.685145	6.560427e-13	3.033148e-8	4.333069e-9
8	203967_at	201478_s_at	U59151	DKC1	0.678121	1.379355e-12	6.377309e-8	7.971637e-9
9	203968_s_at	205085_at	NM_004153	ORC1L	0.677339	1.496454e-12	6.918703e-8	7.687448e-9
10	203967_at	1053_at	M87338	RFC2	0.673331	2.263202e-12	1.046369e-7	1.046369e-8
11	203967_at	222250_s_at	AK001363	INTS7	0.671721	2.667646e-12	1.233360e-7	1.121236e-8
12	203968_s_at	220651_s_at	NM_018518	MCM10	0.671594	2.702350e-12	1.249404e-7	1.041170e-8
13	203967_at	208941_s_at	BC000941	SEPHS1	0.671012	2.866911e-12	1.325488e-7	1.019606e-8
14	203967_at	225655_at	AK025578	UHRF1	0.666951	4.315759e-12	1.995348e-7	1.425248e-8
15	203968_s_at	205393_s_at	NM_001274	CHEK1	0.665344	5.065076e-12	2.341787e-7	1.561192e-8
16	203968_s_at	230556_at	AA977197	IMMP1L	0.664205	5.670236e-12	2.621577e-7	1.638485e-8
17	203968_s_at	212804_s_at	AI797397	GAPVD1	0.663831	5.883546e-12	2.720199e-7	1.600117e-8
18	203967_at	219861_at	NM_018163	DNAJC17	0.663314	6.191808e-12	2.862720e-7	1.590400e-8
19	203967_at	204768_s_at	NM_004111	FEN1	0.661744	7.224784e-12	3.340307e-7	1.758056e-8
20	203967_at	204772_s_at	NM_007344	TTF1	0.661286	7.555942e-12	3.493414e-7	1.746707e-8
21	203967_at	226082_s_at	AW513629	SFRS15	0.659050	9.393873e-12	4.343163e-7	2.068173e-8
22	203967_at	202854_at	NM_000194	HPRT1	0.657971	1.042802e-11	4.821292e-7	2.191496e-8
23	203967_at	212836_at	D26018	POLD3	0.656602	1.189803e-11	5.500937e-7	2.391712e-8
24	203968_s_at	222713_s_at	AF181995	FANCF	0.654439	1.463395e-11	6.765858e-7	2.819108e-8
25	203968_s_at	202697_at	NM_007006	NUDT21	0.654193	1.498211e-11	6.926826e-7	2.770731e-8
26	203967_at	212302_at	AI192081	RTF1	0.653746	1.563243e-11	7.227496e-7	2.779806e-8
27	203967_at	203344_s_at	NM_002894	RBBP8	0.652073	1.831780e-11	8.469053e-7	3.136686e-8
28	203967_at	1553709_a_at	NM_032284	PRPF38A	0.651793	1.880991e-11	8.696573e-7	3.105919e-8
29	203967_at	221677_s_at	AF232674		0.651662	1.904282e-11	8.804256e-7	3.035950e-8
30	203968_s_at	231772_x_at	AL572471	CENPH	0.650395	2.145544e-11	9.919709e-7	3.306570e-8
31	203967_at	212949_at	D38553	NCAPH	0.649239	2.390991e-11	1.105451e-6	3.565970e-8
32	203967_at	223429_x_at	BC004122	ISY1	0.646476	3.091429e-11	1.429291e-6	4.466536e-8
33	203967_at	209825_s_at	BC002906	UCK2	0.646353	3.126912e-11	1.445696e-6	4.380898e-8
34	203968_s_at	205519_at	NM_024908	WDR76	0.644955	3.557261e-11	1.644664e-6	4.837248e-8
35	203967_at	208675_s_at	D29643	DDOST	0.644695	3.643580e-11	1.684573e-6	4.813066e-8
36	203967_at	213322_at	AL031778	C6orf130	0.644355	3.758940e-11	1.737908e-6	4.827523e-8
37	203967_at	200594_x_at	NM_004501	HNRNPU	0.643768	3.966867e-11	1.834041e-6	4.956868e-8
38	203967_at	222713_s_at	AF181995	FANCF	0.643410	4.099313e-11	1.895276e-6	4.987569e-8
39	203968_s_at	208066_s_at	NM_001514	GTF2B	0.643318	4.133785e-11	1.911214e-6	4.900549e-8
40	203968_s_at	202413_s_at	NM_003368	USP1	0.643307	4.137873e-11	1.913104e-6	4.782760e-8
41	203967_at	222867_s_at	AV760596	MED31	0.641413	4.917564e-11	2.273586e-6	5.545333e-8
42	203967_at	220651_s_at	NM_018518	MCM10	0.640347	5.416610e-11	2.504315e-6	5.962656e-8
43	203967_at	225642_at	AL581536	KTI12	0.639773	5.705317e-11	2.637796e-6	6.134410e-8
44	203967_at	205519_at	NM_024908	WDR76	0.639342	5.931360e-11	2.742305e-6	6.232512e-8
45	203968_s_at	202533_s_at	BC003584	DHFR	0.639090	6.067594e-11	2.805291e-6	6.233980e-8
46	203967_at	218848_at	NM_024339	THOC6	0.637789	6.820081e-11	3.153196e-6	6.854774e-8
47	203968_s_at	203210_s_at	NM_007370	RFC5	0.637624	6.921670e-11	3.200165e-6	6.808861e-8
48	203968_s_at	209825_s_at	BC002906	UCK2	0.637473	7.015809e-11	3.243689e-6	6.757686e-8
49	203967_at	204448_s_at	AF031463	PDCL	0.637472	7.016544e-11	3.244029e-6	6.620467e-8
50	203967_at	217640_x_at	BF038461	SKA1	0.637145	7.224733e-11	3.340283e-6	6.680566e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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