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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4918	204448_s_at	AF031463	PDCL		phosducin-like
4919	204449_at	NM_005388	PDCL		phosducin-like

Fetching correlation data, please wait...
Getting list of correlations for id 4918.
Getting list of p-values for id 4918.
1 of 2 done.
Getting list of correlations for id 4919.
Getting list of p-values for id 4919.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.251 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204449_at	228069_at	AL138828	FAM54A	0.775841	4.456285e-18	2.060319e-13	2.060319e-13
2	204449_at	203255_at	NM_018693	FBXO11	0.757713	7.258483e-17	3.355887e-12	1.677943e-12
3	204449_at	231863_at	AF161419	ING3	0.750365	2.100547e-16	9.711671e-12	3.237224e-12
4	204449_at	215127_s_at	AL517946	RBMS1	0.743656	5.369217e-16	2.482404e-11	6.206009e-12
5	204449_at	1554455_at	BC010363	LINS1	0.726757	5.044141e-15	2.332108e-10	4.664216e-11
6	204449_at	203401_at	NM_002765	PRPS2	0.723008	8.107892e-15	3.748603e-10	6.247672e-11
7	204449_at	229442_at	BF059556	C18orf54	0.719806	1.208662e-14	5.588128e-10	7.983040e-11
8	204449_at	222962_s_at	AB042719	MCM10	0.715696	2.001444e-14	9.253477e-10	1.156685e-10
9	204449_at	228785_at	AA121673	ZNF281	0.712998	2.773731e-14	1.282407e-9	1.424897e-10
10	204449_at	208956_x_at	U62891	DUT	0.710036	3.951953e-14	1.827146e-9	1.827146e-10
11	204449_at	241838_at	AA699443		0.708541	4.717188e-14	2.180945e-9	1.982677e-10
12	204449_at	219493_at	NM_024745	SHCBP1	0.708504	4.737969e-14	2.190553e-9	1.825461e-10
13	204449_at	227636_at	BG500677	THAP5	0.706291	6.144261e-14	2.840738e-9	2.185183e-10
14	204449_at	203075_at	AW151617	SMAD2	0.705861	6.460905e-14	2.987135e-9	2.133668e-10
15	204448_s_at	230226_s_at	AW612682	KDM5A	0.705681	6.598057e-14	3.050546e-9	2.033697e-10
16	204448_s_at	203482_at	AL133215	FAM178A	0.705454	6.774766e-14	3.132245e-9	1.957653e-10
17	204449_at	212900_at	AJ131244	SEC24A	0.702803	9.210338e-14	4.258307e-9	2.504887e-10
18	204448_s_at	201478_s_at	U59151	DKC1	0.700973	1.136411e-13	5.254082e-9	2.918935e-10
19	204448_s_at	212302_at	AI192081	RTF1	0.696169	1.957872e-13	9.052025e-9	4.764224e-10
20	204449_at	239390_at	BE327650	GTDC1	0.694995	2.232669e-13	1.032252e-8	5.161262e-10
21	204449_at	232156_at	AK024921	MUDENG	0.694500	2.359533e-13	1.090907e-8	5.194794e-10
22	204449_at	211137_s_at	AF189723	ATP2C1	0.693876	2.529048e-13	1.169280e-8	5.314909e-10
23	204448_s_at	211075_s_at	Z25521	CD47	0.692947	2.803584e-13	1.296209e-8	5.635691e-10
24	204449_at	201671_x_at	BC003556	USP14	0.692699	2.881585e-13	1.332272e-8	5.551133e-10
25	204449_at	219031_s_at	NM_016101	NIP7	0.690513	3.665392e-13	1.694657e-8	6.778630e-10
26	204448_s_at	220791_x_at	NM_014139	SCN11A	-0.685024	6.646194e-13	3.072801e-8	1.181847e-9
27	204448_s_at	200713_s_at	NM_012325	MAPRE1	0.684313	7.172008e-13	3.315906e-8	1.228113e-9
28	204449_at	202425_x_at	NM_000944	PPP3CA	0.682544	8.659535e-13	4.003649e-8	1.429875e-9
29	204448_s_at	238704_at	BF245243		0.681578	9.592613e-13	4.435049e-8	1.529327e-9
30	204449_at	212426_s_at	BF033313	YWHAQ	0.681447	9.726611e-13	4.497001e-8	1.499000e-9
31	204448_s_at	222713_s_at	AF181995	FANCF	0.681313	9.865792e-13	4.561350e-8	1.471403e-9
32	204448_s_at	207436_x_at	NM_014896	KIAA0894	-0.681037	1.015743e-12	4.696187e-8	1.467558e-9
33	204449_at	225501_at	AK027039	PHF6	0.680707	1.051686e-12	4.862364e-8	1.473444e-9
34	204449_at	225087_at	AA524072	C16orf63	0.680323	1.095057e-12	5.062889e-8	1.489085e-9
35	204449_at	210758_at	AF098482	PSIP1	0.679928	1.141596e-12	5.278056e-8	1.508016e-9
36	204449_at	218053_at	NM_017892	PRPF40A	0.679912	1.143511e-12	5.286910e-8	1.468586e-9
37	204448_s_at	210416_s_at	BC004207	CHEK2	0.678015	1.394687e-12	6.448198e-8	1.742756e-9
38	204448_s_at	204768_s_at	NM_004111	FEN1	0.677815	1.424084e-12	6.584108e-8	1.732660e-9
39	204448_s_at	208854_s_at	AA586774	STK24	0.676672	1.603883e-12	7.415395e-8	1.901383e-9
40	204449_at	212905_at	AI872408	CSTF2T	0.675959	1.726740e-12	7.983411e-8	1.995853e-9
41	204448_s_at	202629_at	AV681579	APPBP2	0.675770	1.760870e-12	8.141206e-8	1.985660e-9
42	204448_s_at	200594_x_at	NM_004501	HNRNPU	0.675332	1.842406e-12	8.518180e-8	2.028138e-9
43	204449_at	204822_at	NM_003318	TTK	0.675254	1.857228e-12	8.586708e-8	1.996909e-9
44	204448_s_at	218008_at	NM_017994	C7orf42	0.674280	2.053258e-12	9.493035e-8	2.157508e-9
45	204449_at	205628_at	NM_000947	PRIM2	0.674213	2.067412e-12	9.558474e-8	2.124105e-9
46	204448_s_at	200593_s_at	BC003621	HNRNPU	0.673422	2.242199e-12	1.036658e-7	2.253605e-9
47	204449_at	236196_at	BF939032		0.673167	2.301634e-12	1.064138e-7	2.264122e-9
48	204449_at	218595_s_at	NM_018072	HEATR1	0.672180	2.545839e-12	1.177043e-7	2.452174e-9
49	204448_s_at	202296_s_at	NM_007033	RER1	0.671750	2.659634e-12	1.229655e-7	2.509500e-9
50	204448_s_at	209520_s_at	BC001450	NCBP1	0.671730	2.665066e-12	1.232167e-7	2.464333e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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