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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
7127	209360_s_at	D43968	RUNX1		runt-related transcription factor 1
7696	210365_at	D43967	RUNX1		runt-related transcription factor 1

Fetching correlation data, please wait...
Getting list of correlations for id 7127.
Getting list of p-values for id 7127.
1 of 2 done.
Getting list of correlations for id 7696.
Getting list of p-values for id 7696.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.206 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	209360_s_at	204798_at	NM_005375	MYB	0.627409	1.699929e-10	7.859452e-6	7.859452e-6
2	209360_s_at	235233_s_at	AI061377	GMEB1	0.611764	6.326123e-10	2.924820e-5	1.462410e-5
3	209360_s_at	204594_s_at	NM_013298	SMCR7L	0.608356	8.344011e-10	3.857770e-5	1.285923e-5
4	209360_s_at	208979_at	AF128458	NCOA6	0.604467	1.139787e-9	5.269690e-5	1.317423e-5
5	209360_s_at	218079_s_at	NM_024835	GGNBP2	0.601258	1.469683e-9	6.794934e-5	1.358987e-5
6	209360_s_at	226032_at	AU153405	CASP2	0.600712	1.534266e-9	7.093527e-5	1.182254e-5
7	209360_s_at	202706_s_at	D86227	UMPS	0.598635	1.805355e-9	8.346877e-5	1.192411e-5
8	209360_s_at	211202_s_at	AF087481	KDM5B	0.586565	4.544701e-9	2.101197e-4	2.626496e-5
9	209360_s_at	201549_x_at	NM_006618	KDM5B	0.586054	4.721689e-9	2.183026e-4	2.425584e-5
10	209360_s_at	227346_at	AI741188	IKZF1	0.583177	5.849456e-9	2.704437e-4	2.704437e-5
11	209360_s_at	202594_at	NM_015344	LEPROTL1	0.582889	5.975677e-9	2.762795e-4	2.511631e-5
12	209360_s_at	222843_at	AK023411	FIGNL1	0.581722	6.513307e-9	3.011362e-4	2.509469e-5
13	209360_s_at	225343_at	AK025695	TMED8	0.578109	8.487288e-9	3.924013e-4	3.018471e-5
14	209360_s_at	208715_at	BF002031	TMCO1	0.576253	9.711411e-9	4.489974e-4	3.207124e-5
15	209360_s_at	224838_at	AK026898	FOXP1	0.571802	1.336975e-8	6.181372e-4	4.120914e-5
16	209360_s_at	225716_at	AI357639		0.571144	1.401115e-8	6.477917e-4	4.048698e-5
17	209360_s_at	223148_at	BC001319	PIGS	0.568787	1.655902e-8	7.655897e-4	4.503469e-5
18	209360_s_at	221776_s_at	AI885109	BRD7	0.567781	1.777506e-8	8.218122e-4	4.565623e-5
19	209360_s_at	212288_at	AB011126	FNBP1	0.567548	1.806835e-8	8.353719e-4	4.396694e-5
20	209360_s_at	225492_at	BG500396	TMEM33	0.566247	1.979544e-8	9.152225e-4	4.576112e-5
21	209360_s_at	201479_at	NM_001363	DKC1	0.565547	2.078841e-8	9.611314e-4	4.576816e-5
22	209360_s_at	212248_at	AI886796	MTDH	0.563996	2.315985e-8	1.070772e-3	4.867148e-5
23	209360_s_at	236267_at	BG178775	ZNF346	0.561270	2.796457e-8	1.292914e-3	5.621366e-5
24	209360_s_at	202808_at	AK000161	C10orf26	0.561024	2.844176e-8	1.314976e-3	5.479068e-5
25	209360_s_at	224076_s_at	AF255649	WHSC1L1	0.561018	2.845526e-8	1.315601e-3	5.262403e-5
26	209360_s_at	224959_at	AI718385	SLC26A2	0.558751	3.323751e-8	1.536703e-3	5.910397e-5
27	209360_s_at	226255_at	BE302089	ZBTB33	0.557787	3.549633e-8	1.641137e-3	6.078286e-5
28	210365_at	51192_at	AA134926	SSH3	0.557495	3.620820e-8	1.674050e-3	5.978750e-5
29	209360_s_at	221021_s_at	NM_030877	CTNNBL1	0.556747	3.809348e-8	1.761214e-3	6.073151e-5
30	209360_s_at	220742_s_at	NM_018297	NGLY1	0.556711	3.818738e-8	1.765555e-3	5.885184e-5
31	209360_s_at	223031_s_at	AL136921	TRAF7	0.553306	4.804548e-8	2.221335e-3	7.165596e-5
32	209360_s_at	227344_at	AI439886	IKZF1	0.551064	5.581364e-8	2.580488e-3	8.064024e-5
33	209360_s_at	1552863_a_at	NM_145815	CACNG6	-0.550515	5.788962e-8	2.676469e-3	8.110512e-5
34	209360_s_at	209128_s_at	D63879	SART3	0.550338	5.857394e-8	2.708108e-3	7.965023e-5
35	209360_s_at	203062_s_at	NM_014641	MDC1	0.549164	6.331349e-8	2.927236e-3	8.363532e-5
36	209360_s_at	228959_at	AI676241	PDK3	0.547600	7.019915e-8	3.245588e-3	9.015521e-5
37	209360_s_at	219083_at	NM_018130	SHQ1	0.546954	7.324699e-8	3.386501e-3	9.152706e-5
38	209360_s_at	225337_at	AI346910	ABHD2	0.545145	8.246050e-8	3.812479e-3	1.003284e-4
39	209360_s_at	226017_at	AI708432	CMTM7	0.544379	8.668611e-8	4.007846e-3	1.027653e-4
40	209360_s_at	228299_at	AV707142	KCTD20	0.544062	8.849241e-8	4.091358e-3	1.022840e-4
41	209360_s_at	225558_at	R38084	GIT2	0.543682	9.070432e-8	4.193624e-3	1.022835e-4
42	209360_s_at	201290_at	NM_014300	SEC11A	0.542396	9.859597e-8	4.558486e-3	1.085354e-4
43	209360_s_at	215411_s_at	AL008730	TRAF3IP2	0.540879	1.087470e-7	5.027807e-3	1.169257e-4
44	209360_s_at	238462_at	AI418293	UBASH3B	0.540806	1.092581e-7	5.051438e-3	1.148054e-4
45	209360_s_at	228006_at	BG403361		0.540760	1.095779e-7	5.066223e-3	1.125827e-4
46	209360_s_at	201220_x_at	NM_001329	CTBP2	0.539757	1.168745e-7	5.403573e-3	1.174690e-4
47	209360_s_at	201594_s_at	NM_005134	PPP4R1	0.538078	1.301334e-7	6.016589e-3	1.280125e-4
48	209360_s_at	211075_s_at	Z25521	CD47	0.537834	1.321789e-7	6.111158e-3	1.273158e-4
49	209360_s_at	225224_at	AL034550	C20orf112	0.537818	1.323105e-7	6.117244e-3	1.248417e-4
50	209360_s_at	208415_x_at	NM_005537	ING1	0.536519	1.437138e-7	6.644464e-3	1.328893e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
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