[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4279	203560_at	NM_003878	GGH		gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)

Fetching correlation data, please wait...
Getting list of correlations for id 4279.
Getting list of p-values for id 4279.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.131 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203560_at	244552_at	AI190287	ZNF788	0.648481	2.566165e-11	5.932203e-7	5.932203e-7
2	203560_at	232293_at	AL133031	LCORL	0.625397	2.021113e-10	4.672206e-6	2.336103e-6
3	203560_at	219303_at	NM_024546	RNF219	0.624897	2.109571e-10	4.876695e-6	1.625565e-6
4	203560_at	219258_at	NM_017858	TIPIN	0.622646	2.555735e-10	5.908093e-6	1.477023e-6
5	203560_at	212168_at	AL514547	RBM12	0.614114	5.216882e-10	1.205987e-5	2.411973e-6
6	203560_at	214440_at	NM_000662	NAT1	0.613914	5.303589e-10	1.226031e-5	2.043384e-6
7	203560_at	228069_at	AL138828	FAM54A	0.599907	1.634394e-9	3.778230e-5	5.397471e-6
8	203560_at	210216_x_at	AF084513	RAD1	0.596939	2.060195e-9	4.762553e-5	5.953192e-6
9	203560_at	213251_at	AV712064	SMARCA5	0.590130	3.473773e-9	8.030320e-5	8.922578e-6
10	203560_at	203396_at	NM_002789	PSMA4	0.589695	3.590203e-9	8.299471e-5	8.299471e-6
11	203560_at	32723_at	L02547	CSTF1	0.586800	4.465434e-9	1.032274e-4	9.384313e-6
12	203560_at	230416_at	AI709335		0.585651	4.866133e-9	1.124904e-4	9.374199e-6
13	203560_at	218622_at	NM_024057	NUP37	0.577051	9.165933e-9	2.118889e-4	1.629914e-5
14	203560_at	238122_at	AI807494	RBM12B	0.574618	1.092759e-8	2.526131e-4	1.804379e-5
15	203560_at	220840_s_at	NM_018186	C1orf112	0.574563	1.097120e-8	2.536212e-4	1.690808e-5
16	203560_at	222118_at	AK023669	CENPN	0.573864	1.153646e-8	2.666883e-4	1.666802e-5
17	203560_at	211406_at	AF119875	IER3IP1	0.572774	1.247341e-8	2.883478e-4	1.696164e-5
18	203560_at	220171_x_at	NM_018559	KIAA1704	0.568069	1.741843e-8	4.026618e-4	2.237010e-5
19	203560_at	226503_at	BE504653	RIF1	0.565374	2.104061e-8	4.863957e-4	2.559978e-5
20	203560_at	209510_at	AF064801	RNF139	0.565307	2.113974e-8	4.886873e-4	2.443437e-5
21	203560_at	203218_at	W37431	MAPK9	0.563158	2.454632e-8	5.674373e-4	2.702082e-5
22	203560_at	211137_s_at	AF189723	ATP2C1	0.560370	2.974961e-8	6.877217e-4	3.126008e-5
23	203560_at	213365_at	N64622	ERI2	0.557122	3.713829e-8	8.585259e-4	3.732721e-5
24	203560_at	213346_at	BE748563	C13orf27	0.556401	3.899939e-8	9.015489e-4	3.756454e-5
25	203560_at	218203_at	NM_013338	ALG5	0.555728	4.081661e-8	9.435577e-4	3.774231e-5
26	203560_at	207338_s_at	NM_003454	ZNF200	0.552324	5.131205e-8	1.186181e-3	4.562233e-5
27	203560_at	227033_at	AI825800	PDIA3	0.552141	5.194274e-8	1.200760e-3	4.447260e-5
28	203560_at	202126_at	AA156948	PRPF4B	0.551971	5.253602e-8	1.214475e-3	4.337411e-5
29	203560_at	204449_at	NM_005388	PDCL	0.551441	5.442708e-8	1.258191e-3	4.338589e-5
30	203560_at	213701_at	AW299245	C12orf29	0.550989	5.609285e-8	1.296698e-3	4.322328e-5
31	203560_at	205628_at	NM_000947	PRIM2	0.550609	5.752663e-8	1.329843e-3	4.289817e-5
32	203560_at	1554572_a_at	BC029360	SUV39H2	0.550484	5.800990e-8	1.341015e-3	4.190671e-5
33	203560_at	228281_at	BF343258	C11orf82	0.549762	6.085466e-8	1.406777e-3	4.262961e-5
34	203560_at	219283_at	NM_014158	C1GALT1C1	0.548720	6.520175e-8	1.507269e-3	4.433144e-5
35	203560_at	228311_at	AI827455	BCL6B	-0.546817	7.390605e-8	1.708486e-3	4.881389e-5
36	203560_at	224692_at	BF796046	PPP1R15B	0.546525	7.533937e-8	1.741620e-3	4.837834e-5
37	203560_at	224200_s_at	AB035274	RAD18	0.545835	7.882073e-8	1.822099e-3	4.924592e-5
38	203560_at	215691_x_at	AV702994	HSPB11	0.545735	7.934099e-8	1.834126e-3	4.826646e-5
39	203560_at	227928_at	AI224977	C12orf48	0.544716	8.479956e-8	1.960311e-3	5.026439e-5
40	203560_at	222627_at	AK002205	VPS54	0.544456	8.625340e-8	1.993920e-3	4.984799e-5
41	203560_at	204444_at	NM_004523	KIF11	0.543108	9.415212e-8	2.176515e-3	5.308572e-5
42	203560_at	202557_at	AI718418	HSPA13	0.541131	1.069892e-7	2.473268e-3	5.888734e-5
43	203560_at	226350_at	AU155565	CHML	0.538568	1.261249e-7	2.915629e-3	6.780533e-5
44	203560_at	219493_at	NM_024745	SHCBP1	0.537043	1.390122e-7	3.213545e-3	7.303511e-5
45	203560_at	213599_at	BE045993	OIP5	0.536542	1.435027e-7	3.317352e-3	7.371893e-5
46	203560_at	227280_s_at	AK026922	CCNYL1	0.531870	1.926475e-7	4.453432e-3	9.681373e-5
47	203560_at	224470_at	BC006178	SEC22C	0.531520	1.969158e-7	4.552103e-3	9.685326e-5
48	203560_at	206734_at	NM_003772	JRKL	0.530978	2.036896e-7	4.708692e-3	9.809776e-5
49	203560_at	235390_at	AA398321	SFRS12IP1	0.529368	2.251434e-7	5.204640e-3	1.062171e-4
50	203560_at	219797_at	NM_012214	MGAT4A	0.528828	2.328114e-7	5.381902e-3	1.076380e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation