[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3038	202060_at	NM_014633	CTR9		Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)

Fetching correlation data, please wait...
Getting list of correlations for id 3038.
Getting list of p-values for id 3038.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.154 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202060_at	209271_at	AB032251	BPTF	0.728218	4.183963e-15	9.672067e-11	9.672067e-11
2	202060_at	209084_s_at	BE504689		0.696596	1.866261e-13	4.314235e-9	2.157117e-9
3	202060_at	209580_s_at	AF114784	MBD4	0.689175	4.242887e-13	9.808281e-9	3.269427e-9
4	202060_at	228963_at	BE856028	RSBN1L	0.688690	4.472909e-13	1.034002e-8	2.585006e-9
5	202060_at	208617_s_at	AF208850	PTP4A2	0.686193	5.861361e-13	1.354971e-8	2.709942e-9
6	202060_at	222388_s_at	AF186382	VPS35	0.683793	7.581067e-13	1.752515e-8	2.920859e-9
7	202060_at	1555844_s_at	AL713781	HNRNPM	0.678493	1.326831e-12	3.067235e-8	4.381764e-9
8	202060_at	227539_at	AW298099	GNA13	0.678149	1.375341e-12	3.179376e-8	3.974220e-9
9	202060_at	225916_at	AA789302	ZNF131	0.677489	1.473189e-12	3.405572e-8	3.783969e-9
10	202060_at	201624_at	NM_001349	DARS	0.673828	2.150853e-12	4.972127e-8	4.972127e-9
11	202060_at	217803_at	NM_022130	GOLPH3	0.672514	2.460476e-12	5.687883e-8	5.170802e-9
12	202060_at	213090_s_at	AI744029	TAF4	0.667721	3.995556e-12	9.236526e-8	7.697105e-9
13	202060_at	228026_at	AI983535	SIKE1	0.660956	7.803473e-12	1.803929e-7	1.387638e-8
14	202060_at	212526_at	AK002207	SPG20	0.659934	8.620593e-12	1.992823e-7	1.423445e-8
15	202060_at	201515_s_at	NM_004622	TSN	0.655953	1.266238e-11	2.927161e-7	1.951441e-8
16	202060_at	223431_at	BC001818	CNO	0.649744	2.280536e-11	5.271915e-7	3.294947e-8
17	202060_at	218023_s_at	NM_016605	FAM53C	0.647762	2.743938e-11	6.343162e-7	3.731272e-8
18	202060_at	212248_at	AI886796	MTDH	0.644872	3.584642e-11	8.286616e-7	4.603676e-8
19	202060_at	209130_at	BC003686	SNAP23	0.642901	4.294389e-11	9.927339e-7	5.224915e-8
20	202060_at	209128_s_at	D63879	SART3	0.639524	5.835047e-11	1.348888e-6	6.744439e-8
21	202060_at	225461_at	BE504570	EHMT1	0.638109	6.627331e-11	1.532040e-6	7.295429e-8
22	202060_at	213404_s_at	BF033683	RHEB	0.637020	7.306287e-11	1.688994e-6	7.677247e-8
23	202060_at	209306_s_at	AI139569	SWAP70	0.636295	7.794698e-11	1.801900e-6	7.834350e-8
24	202060_at	202673_at	NM_003859	DPM1	0.634809	8.896087e-11	2.056508e-6	8.568785e-8
25	202060_at	203250_at	NM_014892	RBM16	0.633438	1.004308e-10	2.321658e-6	9.286631e-8
26	202060_at	226331_at	BF508813	BBX	0.632520	1.088880e-10	2.517163e-6	9.681396e-8
27	202060_at	222832_s_at	AA746206	MFF	0.631565	1.184127e-10	2.737347e-6	1.013832e-7
28	202060_at	201595_s_at	NM_018471	ZC3H15	0.630907	1.254339e-10	2.899656e-6	1.035591e-7
29	202060_at	235940_at	AW983691	C9orf64	0.630569	1.291948e-10	2.986596e-6	1.029861e-7
30	202060_at	212635_at	AW161626	TNPO1	0.626972	1.765186e-10	4.080580e-6	1.360193e-7
31	202060_at	209712_at	AI769637	SLC35D1	0.626252	1.878067e-10	4.341526e-6	1.400492e-7
32	202060_at	226952_at	AU149385	EAF1	0.625582	1.989390e-10	4.598872e-6	1.437148e-7
33	202060_at	219279_at	NM_017718	DOCK10	0.625294	2.038991e-10	4.713536e-6	1.428344e-7
34	202060_at	209259_s_at	AF020043	SMC3	0.624678	2.149527e-10	4.969061e-6	1.461489e-7
35	202060_at	202228_s_at	NM_017455	NPTN	0.624227	2.234000e-10	5.164338e-6	1.475525e-7
36	202060_at	212408_at	AK023204	TOR1AIP1	0.618633	3.584794e-10	8.286968e-6	2.301935e-7
37	202060_at	204367_at	D28588	SP2	0.616470	4.293210e-10	9.924613e-6	2.682328e-7
38	202060_at	212435_at	AA205593	TRIM33	0.615929	4.490466e-10	1.038061e-5	2.731740e-7
39	202060_at	223071_at	AL136667	IER3IP1	0.615451	4.671637e-10	1.079942e-5	2.769083e-7
40	202060_at	218605_at	NM_022366	TFB2M	0.613351	5.554983e-10	1.284145e-5	3.210363e-7
41	202060_at	206542_s_at	AV725365	SMARCA2	0.612384	6.013314e-10	1.390098e-5	3.390482e-7
42	202060_at	225880_at	BF676081		0.611488	6.470568e-10	1.495801e-5	3.561431e-7
43	202060_at	209248_at	AL136713	GHITM	0.611433	6.499456e-10	1.502479e-5	3.494138e-7
44	202060_at	209025_s_at	AF037448	SYNCRIP	0.610523	7.000093e-10	1.618211e-5	3.677753e-7
45	202060_at	225022_at	AW271409	GOPC	0.610391	7.075559e-10	1.635657e-5	3.634793e-7
46	202060_at	200738_s_at	NM_000291	PGK1	0.609833	7.403656e-10	1.711503e-5	3.720659e-7
47	202060_at	201472_at	NM_003372	VBP1	0.609694	7.487472e-10	1.730879e-5	3.682721e-7
48	202060_at	201599_at	NM_000274	OAT	0.609672	7.501181e-10	1.734048e-5	3.612600e-7
49	202060_at	202853_s_at	NM_002958	RYK	0.609570	7.563258e-10	1.748398e-5	3.568160e-7
50	202060_at	217788_s_at	NM_004481	GALNT2	0.608811	8.042986e-10	1.859297e-5	3.718594e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation