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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 4 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
7287	209579_s_at	AL556619	MBD4		methyl-CpG binding domain protein 4
7288	209580_s_at	AF114784	MBD4		methyl-CpG binding domain protein 4
9851	214047_s_at	AI913365	MBD4		methyl-CpG binding domain protein 4
9852	214048_at	AI913365	MBD4		methyl-CpG binding domain protein 4

Fetching correlation data, please wait...
Getting list of correlations for id 7287.
Getting list of p-values for id 7287.
1 of 4 done.
Getting list of correlations for id 7288.
Getting list of p-values for id 7288.
2 of 4 done.
Getting list of correlations for id 9851.
Getting list of p-values for id 9851.
3 of 4 done.
Getting list of correlations for id 9852.
Getting list of p-values for id 9852.
4 of 4 done.
Calculating corrections for multiple testing (n=92468), please wait...
Done; whole program took 0.369 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	209579_s_at	221829_s_at	AI307759	TNPO1	0.946364	5.408915e-42	5.001515e-37	5.001515e-37
2	209579_s_at	209225_x_at	AI653355	TNPO1	0.943230	5.209247e-41	4.816886e-36	2.408443e-36
3	209579_s_at	212840_at	BG339560	UBXN7	0.927479	8.695072e-37	8.040159e-32	2.680053e-32
4	209579_s_at	242343_x_at	H57111		0.927140	1.045495e-36	9.667487e-32	2.416872e-32
5	209579_s_at	202040_s_at	NM_005056	KDM5A	0.925639	2.338942e-36	2.162773e-31	4.325546e-32
6	209579_s_at	238317_x_at	BF439728		0.922592	1.141434e-35	1.055461e-30	1.759102e-31
7	209579_s_at	212897_at	AI738802	CDK19	0.922517	1.185922e-35	1.096598e-30	1.566569e-31
8	209579_s_at	214843_s_at	AK022864	USP33	0.922028	1.519586e-35	1.405131e-30	1.756413e-31
9	209579_s_at	202191_s_at	BE439987	GAS7	0.914564	5.542696e-34	5.125220e-29	5.694689e-30
10	209579_s_at	229467_at	AA504356	PCBP2	0.911933	1.821711e-33	1.684500e-28	1.684500e-29
11	209579_s_at	238303_at	AW070371	STT3B	0.910904	2.871305e-33	2.655039e-28	2.413672e-29
12	209579_s_at	215338_s_at	AI688640	NKTR	0.910746	3.078911e-33	2.847007e-28	2.372506e-29
13	209579_s_at	214405_at	Z39557		0.909645	4.975899e-33	4.601114e-28	3.539319e-29
14	209579_s_at	201602_s_at	BE737620	PPP1R12A	0.908552	7.967592e-33	7.367473e-28	5.262481e-29
15	209579_s_at	203496_s_at	AF055994	MED1	0.907804	1.095911e-32	1.013367e-27	6.755783e-29
16	209579_s_at	212492_s_at	AW237172	KDM4B	0.905208	3.244606e-32	3.000222e-27	1.875139e-28
17	209579_s_at	203318_s_at	NM_021964	ZNF148	0.904991	3.547929e-32	3.280699e-27	1.929823e-28
18	209579_s_at	202379_s_at	AI361805	NKTR	0.904677	4.034379e-32	3.730509e-27	2.072505e-28
19	209579_s_at	239167_at	H86858		0.904273	4.759078e-32	4.400624e-27	2.316118e-28
20	209579_s_at	242926_at	AI798124		0.903937	5.456372e-32	5.045398e-27	2.522699e-28
21	209579_s_at	217966_s_at	NM_022083	FAM129A	0.903083	7.707752e-32	7.127204e-27	3.393907e-28
22	209579_s_at	220694_at	NM_014152	ASAP1IT1	0.902665	9.118841e-32	8.432010e-27	3.832732e-28
23	209579_s_at	207657_x_at	NM_002270	TNPO1	0.902634	9.232466e-32	8.537076e-27	3.711772e-28
24	209579_s_at	225452_at	AI423072	MED1	0.901494	1.453751e-31	1.344255e-26	5.601062e-28
25	209579_s_at	239107_at	AA725587	ZNF280D	0.900992	1.771846e-31	1.638391e-26	6.553563e-28
26	209579_s_at	1555303_at	AB062477		0.900665	2.015169e-31	1.863387e-26	7.166871e-28
27	209579_s_at	213956_at	AW299294	CEP350	0.899121	3.673790e-31	3.397080e-26	1.258178e-27
28	209579_s_at	229897_at	BF195808	ZNF641	0.898496	4.672202e-31	4.320292e-26	1.542961e-27
29	209579_s_at	223059_s_at	BC004872	FAM107B	0.897719	6.287312e-31	5.813751e-26	2.004742e-27
30	209579_s_at	242859_at	BE156563		0.897239	7.541239e-31	6.973233e-26	2.324411e-27
31	209579_s_at	235266_at	AI139629	ATAD2	0.896961	8.376647e-31	7.745718e-26	2.498619e-27
32	209579_s_at	230651_at	AI018256		0.896725	9.157801e-31	8.468035e-26	2.646261e-27
33	209579_s_at	1556352_at	AI692624		0.896285	1.080181e-30	9.988219e-26	3.026733e-27
34	209579_s_at	243768_at	AA026388		0.895580	1.405478e-30	1.299617e-25	3.822403e-27
35	209579_s_at	207186_s_at	NM_004459	BPTF	0.895210	1.612991e-30	1.491501e-25	4.261431e-27
36	209579_s_at	240478_at	AA648983		0.893441	3.089217e-30	2.856538e-25	7.934826e-27
37	209579_s_at	1563130_a_at	AL109710		0.893050	3.561419e-30	3.293173e-25	8.900467e-27
38	209579_s_at	224736_at	BE617899	CCAR1	0.892793	3.909037e-30	3.614608e-25	9.512126e-27
39	209579_s_at	229398_at	AI769954	RAB18	0.892651	4.113952e-30	3.804090e-25	9.754076e-27
40	209579_s_at	212208_at	AK023837	MED13L	0.892028	5.149817e-30	4.761933e-25	1.190483e-26
41	209579_s_at	1559060_a_at	BF677986	FNIP1	0.891926	5.342828e-30	4.940406e-25	1.204977e-26
42	209579_s_at	204180_s_at	AI745225	ZBTB43	0.891422	6.396818e-30	5.915010e-25	1.408336e-26
43	209579_s_at	222540_s_at	BG286920	RSF1	0.891105	7.162390e-30	6.622918e-25	1.540214e-26
44	209579_s_at	242558_at	AW362945		0.889730	1.164866e-29	1.077128e-24	2.448019e-26
45	209579_s_at	1555446_s_at	BC046241	TRAPPC10	0.889316	1.346597e-29	1.245172e-24	2.767048e-26
46	209579_s_at	236966_at	BF942281		0.889017	1.495111e-29	1.382499e-24	3.005432e-26
47	209579_s_at	226054_at	AA702437	BRD4	0.888816	1.603324e-29	1.482561e-24	3.154386e-26
48	209579_s_at	227039_at	AI674926	AKAP13	0.888405	1.849485e-29	1.710182e-24	3.562879e-26
49	209579_s_at	244154_at	AI751130	DDHD1	0.888398	1.854241e-29	1.714579e-24	3.499142e-26
50	209579_s_at	227740_at	AW173222	UHMK1	0.888001	2.127433e-29	1.967195e-24	3.934390e-26

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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