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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
9725	213795_s_at	AL121905	PTPRA		protein tyrosine phosphatase, receptor type, A

Fetching correlation data, please wait...
Getting list of correlations for id 9725.
Getting list of p-values for id 9725.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.243 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	213795_s_at	212167_s_at	AK021419	SMARCB1	0.721495	9.798275e-15	2.265067e-10	2.265067e-10
2	213795_s_at	204372_s_at	NM_003685	KHSRP	0.704053	7.971582e-14	1.842791e-9	9.213953e-10
3	213795_s_at	208713_at	BF724216	HNRNPUL1	0.684944	6.702985e-13	1.549529e-8	5.165097e-9
4	213795_s_at	227528_s_at	AI394529	MLL2	0.679398	1.206806e-12	2.789774e-8	6.974434e-9
5	213795_s_at	204311_at	NM_001678	ATP1B2	0.668263	3.784241e-12	8.748030e-8	1.749606e-8
6	213795_s_at	37462_i_at	L21990	SF3A2	0.666542	4.495422e-12	1.039207e-7	1.732011e-8
7	213795_s_at	201388_at	NM_002809	PSMD3	0.666439	4.542206e-12	1.050022e-7	1.500031e-8
8	213795_s_at	204629_at	NM_013327	PARVB	0.663213	6.253661e-12	1.445659e-7	1.807074e-8
9	213795_s_at	206649_s_at	NM_006521	TFE3	0.658084	1.031458e-11	2.384421e-7	2.649357e-8
10	213795_s_at	208751_at	BC001165	NAPA	0.652834	1.704566e-11	3.940446e-7	3.940446e-8
11	213795_s_at	46323_at	AL120741	CANT1	0.652549	1.751209e-11	4.048271e-7	3.680246e-8
12	213795_s_at	213038_at	AL031602	RNF19B	0.651668	1.903330e-11	4.399927e-7	3.666606e-8
13	213795_s_at	212898_at	AB007866	TTI1	0.648576	2.543696e-11	5.880262e-7	4.523278e-8
14	213795_s_at	209044_x_at	BC004273	SF3B4	0.648451	2.573306e-11	5.948711e-7	4.249079e-8
15	213795_s_at	220947_s_at	NM_015527	TBC1D10B	0.646623	3.049776e-11	7.050168e-7	4.700112e-8
16	213795_s_at	200827_at	NM_000302	PLOD1	0.646193	3.173461e-11	7.336091e-7	4.585057e-8
17	213795_s_at	204480_s_at	NM_024112	C9orf16	0.642691	4.377536e-11	1.011955e-6	5.952677e-8
18	213795_s_at	224947_at	AL559247	RNF26	0.642614	4.408587e-11	1.019133e-6	5.661850e-8
19	213795_s_at	206074_s_at	NM_002131	HMGA1	0.642294	4.538913e-11	1.049261e-6	5.522424e-8
20	213795_s_at	38269_at	AL050147	PRKD2	0.642244	4.559715e-11	1.054069e-6	5.270347e-8
21	213795_s_at	213043_s_at	AI023317	MED24	0.640012	5.583417e-11	1.290718e-6	6.146278e-8
22	213795_s_at	217991_x_at	NM_018070	SSBP3	0.640004	5.587204e-11	1.291594e-6	5.870882e-8
23	213795_s_at	204805_s_at	NM_006026	H1FX	0.639882	5.649404e-11	1.305973e-6	5.678142e-8
24	213795_s_at	223237_x_at	AL136925	AP2A1	0.637916	6.742894e-11	1.558755e-6	6.494812e-8
25	213795_s_at	231815_at	AB040956	PHF12	0.636018	7.989606e-11	1.846957e-6	7.387829e-8
26	213795_s_at	231835_at	AL359575	C1orf93	0.635700	8.219151e-11	1.900021e-6	7.307773e-8
27	213795_s_at	226853_at	AU145366	BMP2K	0.634911	8.815464e-11	2.037871e-6	7.547670e-8
28	213795_s_at	224186_s_at	AL136729	RNF123	0.633744	9.775289e-11	2.259754e-6	8.070548e-8
29	213795_s_at	214484_s_at	AF226604	SIGMAR1	0.632897	1.053341e-10	2.435009e-6	8.396584e-8
30	213795_s_at	217903_at	NM_013403	STRN4	0.631590	1.181461e-10	2.731183e-6	9.103943e-8
31	213795_s_at	222165_x_at	AK022885	C9orf16	0.631429	1.198300e-10	2.770111e-6	8.935843e-8
32	213795_s_at	1553015_a_at	NM_004260	RECQL4	0.629097	1.468701e-10	3.395197e-6	1.060999e-7
33	213795_s_at	208619_at	L40326	DDB1	0.625924	1.931766e-10	4.465664e-6	1.353232e-7
34	213795_s_at	219129_s_at	NM_024632	SAP30L	0.625482	2.006539e-10	4.638516e-6	1.364269e-7
35	213795_s_at	225933_at	BF115231	CCDC137	0.624564	2.170536e-10	5.017628e-6	1.433608e-7
36	213795_s_at	36564_at	W27419	RNF19B	0.624395	2.202144e-10	5.090696e-6	1.414082e-7
37	213795_s_at	214426_x_at	BF062223	CHAF1A	0.624066	2.264839e-10	5.235628e-6	1.415034e-7
38	213795_s_at	202161_at	NM_002741	PKN1	0.620611	3.035865e-10	7.018010e-6	1.846845e-7
39	213795_s_at	214792_x_at	AI955119	VAMP2	0.619481	3.338771e-10	7.718237e-6	1.979035e-7
40	213795_s_at	244519_at	AI829840	ASXL1	0.618957	3.488707e-10	8.064845e-6	2.016211e-7
41	213795_s_at	226849_at	AB046828	DENND1A	0.617076	4.082285e-10	9.437018e-6	2.301712e-7
42	213795_s_at	1553993_s_at	BC024312	MED25	0.616296	4.355722e-10	1.006912e-5	2.397410e-7
43	213795_s_at	216267_s_at	BF034906	TMEM115	0.614087	5.228674e-10	1.208713e-5	2.810959e-7
44	213795_s_at	223290_at	BC000320	PDXP	0.613117	5.662593e-10	1.309022e-5	2.975049e-7
45	213795_s_at	38043_at	X55448	FAM3A	0.612493	5.960231e-10	1.377827e-5	3.061837e-7
46	213795_s_at	223754_at	BC005083	C2orf88	0.611407	6.513410e-10	1.505705e-5	3.273272e-7
47	213795_s_at	225124_at	BF508705	PPP1R9B	0.611405	6.514338e-10	1.505919e-5	3.204084e-7
48	213795_s_at	201746_at	NM_000546	TP53	0.610600	6.956456e-10	1.608124e-5	3.350258e-7
49	213795_s_at	227294_at	AI474448	ZNF689	0.610582	6.966316e-10	1.610403e-5	3.286537e-7
50	213795_s_at	238117_at	AW615133	PPOX	0.610438	7.048592e-10	1.629423e-5	3.258846e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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