[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5592	205682_x_at	NM_019101	APOM		apolipoprotein M

Fetching correlation data, please wait...
Getting list of correlations for id 5592.
Getting list of p-values for id 5592.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.125 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205682_x_at	219785_s_at	NM_024735	FBXO31	0.600944	1.506495e-9	3.482564e-5	3.482564e-5
2	205682_x_at	240336_at	AI242749	HBM	0.591888	3.038872e-9	7.024961e-5	3.512481e-5
3	205682_x_at	205262_at	NM_000238	KCNH2	0.552424	5.096990e-8	1.178271e-3	3.927571e-4
4	205682_x_at	219672_at	NM_016633	AHSP	0.551090	5.571716e-8	1.288014e-3	3.220034e-4
5	205682_x_at	206465_at	BE856376	ACSBG1	0.549358	6.250664e-8	1.444966e-3	2.889932e-4
6	205682_x_at	237403_at	AI097490	GFI1B	0.545541	8.035358e-8	1.857534e-3	3.095890e-4
7	205682_x_at	211434_s_at	AF015524	CCRL2	0.544741	8.466270e-8	1.957148e-3	2.795925e-4
8	205682_x_at	206109_at	NM_000148	FUT1	0.540876	1.087643e-7	2.514305e-3	3.142881e-4
9	205682_x_at	212949_at	D38553	NCAPH	0.535877	1.496907e-7	3.460399e-3	3.844888e-4
10	205682_x_at	201714_at	NM_001070	TUBG1	0.533869	1.699351e-7	3.928389e-3	3.928389e-4
11	205682_x_at	202183_s_at	NM_007317	KIF22	0.532218	1.885003e-7	4.357560e-3	3.961419e-4
12	205682_x_at	226689_at	AI749451	CISD2	0.530357	2.117289e-7	4.894536e-3	4.078780e-4
13	205682_x_at	230988_at	AU149490		0.523049	3.319330e-7	7.673296e-3	5.902535e-4
14	205682_x_at	210446_at	M30601	GATA1	0.521348	3.680014e-7	8.507088e-3	6.076492e-4
15	205682_x_at	208074_s_at	NM_021575	AP2S1	0.521275	3.696255e-7	8.544634e-3	5.696423e-4
16	205682_x_at	218732_at	NM_016077	PTRH2	0.519958	4.002081e-7	9.251610e-3	5.782256e-4
17	205682_x_at	210151_s_at	AF186773	DYRK3	0.517590	4.612834e-7	1.066349e-2	6.272641e-4
18	205682_x_at	202201_at	NM_000713	BLVRB	0.517174	4.729036e-7	1.093211e-2	6.073396e-4
19	205682_x_at	211658_at	L19185	PRDX2	0.516517	4.917920e-7	1.136876e-2	5.983555e-4
20	205682_x_at	210672_s_at	BC004185	NPRL3	0.515742	5.149870e-7	1.190495e-2	5.952477e-4
21	205682_x_at	202556_s_at	NM_006337	MCRS1	0.510120	7.170304e-7	1.657559e-2	7.893139e-4
22	205682_x_at	200925_at	NM_004373	COX6A1	0.509621	7.381959e-7	1.706487e-2	7.756761e-4
23	205682_x_at	215812_s_at	U41163		0.509215	7.558442e-7	1.747285e-2	7.596891e-4
24	205682_x_at	207941_s_at	NM_004902	RBM39	-0.509158	7.583817e-7	1.753151e-2	7.304795e-4
25	205682_x_at	204641_at	NM_002497	NEK2	0.507253	8.469422e-7	1.957876e-2	7.831505e-4
26	205682_x_at	209345_s_at	AL561930	PI4K2A	0.507160	8.515339e-7	1.968491e-2	7.571119e-4
27	205682_x_at	220239_at	NM_018846	KLHL7	0.506975	8.606561e-7	1.989579e-2	7.368810e-4
28	205682_x_at	223375_at	BC002720	TBC1D22B	0.506727	8.730689e-7	2.018273e-2	7.208119e-4
29	205682_x_at	222099_s_at	AW593859	LSM14A	0.504652	9.837844e-7	2.274214e-2	7.842118e-4
30	205682_x_at	205085_at	NM_004153	ORC1L	0.502852	1.090433e-6	2.520753e-2	8.402511e-4
31	205682_x_at	223754_at	BC005083	C2orf88	0.502690	1.100523e-6	2.544080e-2	8.206710e-4
32	205682_x_at	231059_x_at	AI744643	SCAND1	0.501446	1.181257e-6	2.730713e-2	8.533478e-4
33	205682_x_at	223133_at	BC001033	TMEM14B	0.500433	1.251053e-6	2.892060e-2	8.763819e-4
34	205682_x_at	210504_at	U65404	KLF1	0.500360	1.256184e-6	2.903921e-2	8.540945e-4
35	205682_x_at	209482_at	BC001430	POP7	0.497272	1.494724e-6	3.455354e-2	9.872439e-4
36	205682_x_at	221249_s_at	NM_030802	FAM117A	0.496480	1.562436e-6	3.611883e-2	1.003301e-3
37	205682_x_at	1559946_s_at	AI860098	RUVBL2	0.495282	1.670428e-6	3.861529e-2	1.043657e-3
38	205682_x_at	204603_at	NM_003686	EXO1	0.494128	1.781025e-6	4.117195e-2	1.083472e-3
39	205682_x_at	201006_at	NM_005809	PRDX2	0.493657	1.828061e-6	4.225929e-2	1.083572e-3
40	205682_x_at	202870_s_at	NM_001255	CDC20	0.493642	1.829667e-6	4.229642e-2	1.057410e-3
41	205682_x_at	230840_at	BE504634	LOC388588	0.493266	1.868043e-6	4.318354e-2	1.053257e-3
42	205682_x_at	57163_at	H93026	ELOVL1	0.492800	1.916857e-6	4.431199e-2	1.055047e-3
43	205682_x_at	209224_s_at	BC003674	NDUFA2	0.492333	1.966891e-6	4.546862e-2	1.057410e-3
44	205682_x_at	1555590_a_at	BC009797	GATA1	0.491281	2.084188e-6	4.818018e-2	1.095004e-3
45	205682_x_at	209382_at	U93867	POLR3C	0.490761	2.144591e-6	4.957650e-2	1.101700e-3
46	205682_x_at	209507_at	BC005264	RPA3	0.489242	2.330490e-6	5.387393e-2	1.171172e-3
47	205682_x_at	203489_at	NM_006427	SIVA1	0.489001	2.361402e-6	5.458852e-2	1.161458e-3
48	205682_x_at	202456_s_at	NM_006336	ZER1	0.488871	2.378111e-6	5.497479e-2	1.145308e-3
49	205682_x_at	209714_s_at	AF213033	CDKN3	0.488790	2.388649e-6	5.521840e-2	1.126906e-3
50	205682_x_at	205436_s_at	NM_002105	H2AFX	0.488275	2.456678e-6	5.679103e-2	1.135821e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation