[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
12074	218955_at	NM_018310	BRF2		BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like

Fetching correlation data, please wait...
Getting list of correlations for id 12074.
Getting list of p-values for id 12074.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.152 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	218955_at	202417_at	NM_012289	KEAP1	0.725976	5.572145e-15	1.288113e-10	1.288113e-10
2	218955_at	226385_s_at	BG397444	C7orf30	0.675903	1.736807e-12	4.014977e-8	2.007488e-8
3	218955_at	200910_at	NM_005998	CCT3	0.675197	1.868248e-12	4.318829e-8	1.439610e-8
4	218955_at	208649_s_at	AF100752	VCP	0.669664	3.286162e-12	7.596620e-8	1.899155e-8
5	218955_at	210046_s_at	U52144	IDH2	0.667295	4.169700e-12	9.639096e-8	1.927819e-8
6	218955_at	225145_at	AB046857	NCOA5	0.664115	5.720774e-12	1.322471e-7	2.204119e-8
7	218955_at	225196_s_at	AF308301	MRPS26	0.659710	8.811093e-12	2.036860e-7	2.909800e-8
8	218955_at	200642_at	NM_000454	SOD1	0.656508	1.200573e-11	2.775365e-7	3.469207e-8
9	218955_at	202261_at	NM_005997	VPS72	0.651342	1.962645e-11	4.537046e-7	5.041162e-8
10	218955_at	202042_at	NM_002109	HARS	0.650127	2.200199e-11	5.086201e-7	5.086201e-8
11	218955_at	212405_s_at	AK001172	METTL13	0.650122	2.201103e-11	5.088291e-7	4.625719e-8
12	218955_at	201570_at	NM_015380	SAMM50	0.649753	2.278522e-11	5.267259e-7	4.389383e-8
13	218955_at	201569_s_at	NM_015380	SAMM50	0.648588	2.540643e-11	5.873204e-7	4.517849e-8
14	218955_at	203262_s_at	NM_004699	FAM50A	0.648424	2.579982e-11	5.964144e-7	4.260103e-8
15	218955_at	215482_s_at	AJ011307	EIF2B4	0.644947	3.559873e-11	8.229358e-7	5.486239e-8
16	218955_at	224708_at	AA626884	KIAA2013	0.644297	3.779197e-11	8.736370e-7	5.460232e-8
17	218955_at	212627_s_at	AL581473	EXOSC7	0.643757	3.970896e-11	9.179520e-7	5.399718e-8
18	218955_at	202298_at	NM_004541	NDUFA1	0.640787	5.205135e-11	1.203271e-6	6.684840e-8
19	218955_at	207760_s_at	NM_006312	NCOR2	0.639661	5.763239e-11	1.332288e-6	7.012042e-8
20	218955_at	203931_s_at	NM_002949	MRPL12	0.637384	7.071943e-11	1.634821e-6	8.174105e-8
21	218955_at	200802_at	NM_006513	SARS	0.637375	7.077630e-11	1.636136e-6	7.791122e-8
22	218955_at	217913_at	NM_013245	VPS4A	0.636783	7.462636e-11	1.725137e-6	7.841534e-8
23	218955_at	208625_s_at	AF104913	EIF4G1	0.635943	8.042671e-11	1.859224e-6	8.083584e-8
24	218955_at	209759_s_at	BC002746	DCI	0.635765	8.171218e-11	1.888940e-6	7.870585e-8
25	218955_at	211952_at	AF339834	IPO5	0.635762	8.173467e-11	1.889460e-6	7.557842e-8
26	218955_at	200980_s_at	NM_000284	PDHA1	0.635343	8.483849e-11	1.961211e-6	7.543121e-8
27	218955_at	201552_at	NM_005561	LAMP1	0.632503	1.090471e-10	2.520843e-6	9.336455e-8
28	218955_at	218016_s_at	NM_018119	POLR3E	0.632370	1.103309e-10	2.550520e-6	9.109000e-8
29	218955_at	221548_s_at	AY024365	ILKAP	0.632176	1.122319e-10	2.594464e-6	8.946429e-8
30	218955_at	212891_s_at	BF972185	GADD45GIP1	0.625412	2.018563e-10	4.666312e-6	1.555437e-7
31	218955_at	221847_at	BF665706	LOC100129361	0.625027	2.086278e-10	4.822848e-6	1.555758e-7
32	218955_at	217948_at	NM_015582	FAM127B	0.622564	2.573691e-10	5.949600e-6	1.859250e-7
33	218955_at	219598_s_at	NM_016104	RWDD1	0.622011	2.697212e-10	6.235145e-6	1.889438e-7
34	218955_at	208799_at	BC004146	PSMB5	0.621092	2.915294e-10	6.739286e-6	1.982143e-7
35	218955_at	215792_s_at	AL109978	DNAJC11	0.620034	3.187066e-10	7.367541e-6	2.105012e-7
36	218955_at	219244_s_at	NM_022163	MRPL46	0.619317	3.384919e-10	7.824917e-6	2.173588e-7
37	218955_at	224504_s_at	BC006350	BUD13	0.619006	3.474392e-10	8.031753e-6	2.170744e-7
38	218955_at	211043_s_at	BC006332	CLTB	0.617696	3.876557e-10	8.961437e-6	2.358273e-7
39	218955_at	200045_at	NM_001090	ABCF1	0.617407	3.971002e-10	9.179766e-6	2.353786e-7
40	218955_at	217940_s_at	NM_018210	CARKD	0.615677	4.584865e-10	1.059883e-5	2.649708e-7
41	218955_at	202737_s_at	NM_012321	LSM4	0.614514	5.047820e-10	1.166905e-5	2.846109e-7
42	218955_at	209609_s_at	BC004517	MRPL9	0.614350	5.116592e-10	1.182803e-5	2.816197e-7
43	218955_at	201199_s_at	NM_002807	PSMD1	0.612193	6.108175e-10	1.412027e-5	3.283783e-7
44	218955_at	230350_at	AA503360		0.611388	6.523838e-10	1.508116e-5	3.427535e-7
45	218955_at	201491_at	NM_012111	AHSA1	0.611317	6.561215e-10	1.516756e-5	3.370569e-7
46	218955_at	229063_s_at	AI912238		0.611250	6.597242e-10	1.525084e-5	3.315401e-7
47	218955_at	200064_at	AF275719	HSP90AB1	0.611178	6.636054e-10	1.534057e-5	3.263950e-7
48	218955_at	204473_s_at	NM_014630	ZNF592	0.610158	7.210978e-10	1.666962e-5	3.472837e-7
49	218955_at	226091_s_at	BG435643	MRFAP1	0.609409	7.662813e-10	1.771412e-5	3.615127e-7
50	218955_at	201173_x_at	NM_006600	NUDC	0.608705	8.112104e-10	1.875275e-5	3.750550e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation