[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
1716	200606_at	NM_004415	DSP		desmoplakin

Fetching correlation data, please wait...
Getting list of correlations for id 1716.
Getting list of p-values for id 1716.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.110 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	200606_at	213115_at	AL031177	ATG4A	0.481215	3.592867e-6	8.305630e-2	8.305630e-2
2	200606_at	224860_at	AL137489	C9orf123	0.435997	3.390494e-5	7.837806e-1	3.918903e-1
3	200606_at	225725_at	AL533234		0.428296	4.818702e-5	1.113939e+0	3.713131e-1
4	200606_at	1556282_at	W74643	FGFR1OP2	0.424151	5.802212e-5	1.341297e+0	3.353243e-1
5	200606_at	222343_at	AA629050	BCL2L11	0.414009	9.048539e-5	2.091751e+0	4.183502e-1
6	200606_at	230061_at	AW338625	TM4SF18	0.407100	1.214940e-4	2.808577e+0	4.680961e-1
7	200606_at	227917_at	AW192692	FAM85A	0.406651	1.238187e-4	2.862316e+0	4.089023e-1
8	200606_at	206819_at	NM_014549	POM121L9P	0.405671	1.290257e-4	2.982687e+0	3.728359e-1
9	200606_at	221781_s_at	BG168666	DNAJC10	0.402609	1.466428e-4	3.389943e+0	3.766603e-1
10	200606_at	224942_at	BG434272	PAPPA	0.400764	1.583089e-4	3.659626e+0	3.659626e-1
11	200606_at	212865_s_at	BF449063	COL14A1	0.399575	1.662695e-4	3.843653e+0	3.494230e-1
12	200606_at	201231_s_at	NM_001428	ENO1	-0.397426	1.816119e-4	4.198323e+0	3.498603e-1
13	200606_at	209168_at	AW148844	GPM6B	0.397131	1.838139e-4	4.249226e+0	3.268636e-1
14	200606_at	223298_s_at	AF312735	NT5C3	0.395516	1.963244e-4	4.538430e+0	3.241736e-1
15	200606_at	226363_at	BE550362	ABCC5	0.394827	2.018997e-4	4.667314e+0	3.111543e-1
16	200606_at	226270_at	AL562686	EXOC2	0.394704	2.029080e-4	4.690624e+0	2.931640e-1
17	200606_at	209366_x_at	M22865	CYB5A	0.394575	2.039787e-4	4.715376e+0	2.773751e-1
18	200606_at	226684_at	AI217906	ATG2B	0.393953	2.091822e-4	4.835666e+0	2.686481e-1
19	200606_at	205876_at	NM_002310	LIFR	0.393024	2.171875e-4	5.020724e+0	2.642486e-1
20	200606_at	227250_at	BF221745	KREMEN1	0.392913	2.181586e-4	5.043172e+0	2.521586e-1
21	200606_at	208865_at	BG534245	CSNK1A1	0.392029	2.260648e-4	5.225940e+0	2.488543e-1
22	200606_at	223475_at	AF142573	CRISPLD1	0.390912	2.364418e-4	5.465825e+0	2.484466e-1
23	200606_at	232018_at	AI701895	LENG1	0.390467	2.406887e-4	5.564001e+0	2.419131e-1
24	200606_at	218511_s_at	NM_018129	PNPO	0.389858	2.466248e-4	5.701226e+0	2.375511e-1
25	200606_at	209273_s_at	BG387555	ISCA1	0.388933	2.558961e-4	5.915550e+0	2.366220e-1
26	200606_at	205707_at	NM_014339	IL17RA	-0.388910	2.561314e-4	5.920989e+0	2.277303e-1
27	200606_at	238700_at	AI825302		0.388359	2.618125e-4	6.052320e+0	2.241600e-1
28	200606_at	209274_s_at	BC002675	ISCA1	0.387499	2.709104e-4	6.262635e+0	2.236655e-1
29	200606_at	222405_at	AL573951	PTPLAD1	0.387264	2.734456e-4	6.321242e+0	2.179739e-1
30	200606_at	227680_at	AI057121	ZNF326	0.385257	2.959972e-4	6.842567e+0	2.280856e-1
31	200606_at	225880_at	BF676081		0.383020	3.231538e-4	7.470347e+0	2.409789e-1
32	200606_at	205927_s_at	NM_001910	CTSE	0.382261	3.328683e-4	7.694917e+0	2.404662e-1
33	200606_at	215770_at	AF065857		0.381367	3.446673e-4	7.967674e+0	2.414447e-1
34	200606_at	212152_x_at	AI679080	ARID1A	-0.380769	3.527635e-4	8.154834e+0	2.398481e-1
35	200606_at	205129_at	NM_006993	NPM3	0.379621	3.688057e-4	8.525680e+0	2.435909e-1
36	200606_at	225060_at	BF696304	LRP11	0.378933	3.787467e-4	8.755487e+0	2.432080e-1
37	200606_at	1556997_a_at	BC036581		0.378406	3.865133e-4	8.935029e+0	2.414873e-1
38	200606_at	203372_s_at	AB004903	SOCS2	0.378250	3.888456e-4	8.988944e+0	2.365512e-1
39	200606_at	1554509_a_at	BC020605	FAM188A	0.377959	3.932202e-4	9.090071e+0	2.330787e-1
40	200606_at	244403_at	R49501	CRB1	0.377884	3.943596e-4	9.116410e+0	2.279102e-1
41	200606_at	201278_at	N21202	DAB2	0.377043	4.072995e-4	9.415543e+0	2.296474e-1
42	200606_at	229246_at	AI803504	FLJ44342	0.374527	4.483900e-4	1.036543e+1	2.467960e-1
43	200606_at	207843_x_at	NM_001914	CYB5A	0.373838	4.602874e-4	1.064046e+1	2.474527e-1
44	200606_at	201838_s_at	NM_014860	SUPT7L	0.373123	4.729407e-4	1.093297e+1	2.484766e-1
45	200606_at	225780_at	AL565415	RSC1A1	0.372876	4.773979e-4	1.103601e+1	2.452446e-1
46	200606_at	221958_s_at	AA775681	WLS	0.371202	5.085372e-4	1.175585e+1	2.555620e-1
47	200606_at	240890_at	AA041298	LOC643733	0.370579	5.205760e-4	1.203415e+1	2.560458e-1
48	200606_at	219008_at	NM_021925	C2orf43	0.370574	5.206845e-4	1.203666e+1	2.507638e-1
49	200606_at	209626_s_at	AI202969	OSBPL3	0.368512	5.624726e-4	1.300268e+1	2.653608e-1
50	200606_at	232749_at	AU145533		0.368247	5.680620e-4	1.313189e+1	2.626378e-1

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation