[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
3737	202894_at	NM_004444	EPHB4		EPH receptor B4
10789	216680_s_at	BC004264	EPHB4		EPH receptor B4

Fetching correlation data, please wait...
Getting list of correlations for id 3737.
Getting list of p-values for id 3737.
1 of 2 done.
Getting list of correlations for id 10789.
Getting list of p-values for id 10789.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.249 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202894_at	212032_s_at	AL046054	PTOV1	0.738846	1.033720e-15	4.779300e-11	4.779300e-11
2	202894_at	202492_at	NM_024085	ATG9A	0.728908	3.828593e-15	1.770112e-10	8.850558e-11
3	202894_at	201361_at	NM_024092	TMEM109	0.721339	9.990116e-15	4.618830e-10	1.539610e-10
4	202894_at	208420_x_at	NM_003170	SUPT6H	0.714301	2.370299e-14	1.095884e-9	2.739710e-10
5	202894_at	202424_at	NM_030662	MAP2K2	0.713248	2.691576e-14	1.244423e-9	2.488846e-10
6	202894_at	218001_at	NM_016034	MRPS2	0.704971	7.166652e-14	3.313430e-9	5.522383e-10
7	202894_at	38043_at	X55448	FAM3A	0.704500	7.569749e-14	3.499798e-9	4.999711e-10
8	202894_at	202219_at	NM_005629	SLC6A8	0.692368	2.988752e-13	1.381820e-8	1.727274e-9
9	202894_at	209216_at	BC000464	WDR45	0.691398	3.325926e-13	1.537709e-8	1.708565e-9
10	202894_at	225719_s_at	BG497783	MRPL55	0.687247	5.231244e-13	2.418613e-8	2.418613e-9
11	202894_at	208831_x_at	D79984	SUPT6H	0.682897	8.340259e-13	3.856035e-8	3.505487e-9
12	202894_at	218632_at	NM_024602	HECTD3	0.680583	1.065508e-12	4.926271e-8	4.105226e-9
13	202894_at	208132_x_at	NM_004638	BAT2	0.680430	1.082856e-12	5.006479e-8	3.851137e-9
14	202894_at	205516_x_at	NM_012127	CIZ1	0.678634	1.307355e-12	6.044423e-8	4.317445e-9
15	202894_at	217844_at	NM_021198	CTDSP1	0.678363	1.344900e-12	6.218012e-8	4.145341e-9
16	202894_at	226445_s_at	AI743109	TRIM41	0.677545	1.464704e-12	6.771914e-8	4.232446e-9
17	202894_at	213977_s_at	AA054734	CIZ1	0.677136	1.528308e-12	7.065979e-8	4.156458e-9
18	202894_at	223199_at	AA404592	MKNK2	0.675670	1.779109e-12	8.225530e-8	4.569739e-9
19	202894_at	203718_at	NM_006702	PNPLA6	0.674427	2.022407e-12	9.350396e-8	4.921261e-9
20	202894_at	200827_at	NM_000302	PLOD1	0.672112	2.563568e-12	1.185240e-7	5.926201e-9
21	202894_at	201419_at	NM_004656	BAP1	0.671321	2.778279e-12	1.284509e-7	6.116712e-9
22	202894_at	202250_s_at	NM_015726	DCAF8	0.671273	2.791897e-12	1.290806e-7	5.867299e-9
23	202894_at	203719_at	NM_001983	ERCC1	0.670789	2.932503e-12	1.355813e-7	5.894840e-9
24	202894_at	201255_x_at	NM_004639	BAT3	0.669303	3.407922e-12	1.575619e-7	6.565077e-9
25	202894_at	213318_s_at	BG028844	BAT3	0.667261	4.184102e-12	1.934478e-7	7.737910e-9
26	202894_at	225033_at	AV721528	ST3GAL1	0.666978	4.304054e-12	1.989936e-7	7.653602e-9
27	202894_at	217142_at	AL035687		-0.666875	4.348442e-12	2.010459e-7	7.446143e-9
28	202894_at	213360_s_at	AA514622		0.665328	5.073312e-12	2.345595e-7	8.377125e-9
29	202894_at	210208_x_at	BC003133	BAT3	0.665289	5.092707e-12	2.354562e-7	8.119180e-9
30	202894_at	218037_at	NM_024293	FAM134A	0.665102	5.188132e-12	2.398681e-7	7.995603e-9
31	202894_at	205546_s_at	NM_003331	TYK2	0.665049	5.215416e-12	2.411296e-7	7.778373e-9
32	202894_at	206846_s_at	NM_006044	HDAC6	0.664945	5.269602e-12	2.436348e-7	7.613587e-9
33	202894_at	228114_x_at	BE796624	C16orf13	0.664883	5.302049e-12	2.451349e-7	7.428332e-9
34	202894_at	212081_x_at	AF129756	BAT2	0.663226	6.245589e-12	2.887586e-7	8.492899e-9
35	202894_at	212086_x_at	AK026584	LMNA	0.661845	7.153189e-12	3.307205e-7	9.449158e-9
36	202894_at	215089_s_at	AW409974	RBM10	0.657529	1.088218e-11	5.031266e-7	1.397574e-8
37	202894_at	201871_s_at	NM_015853	UBXN1	0.654156	1.503423e-11	6.950927e-7	1.878629e-8
38	202894_at	202253_s_at	NM_004945	DNM2	0.650632	2.098156e-11	9.700613e-7	2.552793e-8
39	202894_at	212256_at	BE906572	GALNT10	0.646892	2.974681e-11	1.375314e-6	3.526447e-8
40	202894_at	209665_at	AF040704	CYB561D2	0.646332	3.133093e-11	1.448554e-6	3.621385e-8
41	202894_at	223769_x_at	AF284750	HYI	0.646253	3.155963e-11	1.459128e-6	3.558848e-8
42	202894_at	202481_at	NM_004753	DHRS3	0.646241	3.159514e-11	1.460770e-6	3.478023e-8
43	202894_at	212518_at	AB011161	PIP5K1C	0.645141	3.497040e-11	1.616821e-6	3.760050e-8
44	202894_at	224821_at	AL520200	ABHD14B	0.644137	3.834934e-11	1.773043e-6	4.029644e-8
45	202894_at	203379_at	NM_002953	RPS6KA1	0.643097	4.218312e-11	1.950294e-6	4.333988e-8
46	202894_at	200932_s_at	NM_006400	DCTN2	0.642326	4.525862e-11	2.092487e-6	4.548885e-8
47	202894_at	211780_x_at	BC006163	DCTN1	0.642184	4.584679e-11	2.119681e-6	4.509959e-8
48	202894_at	226053_at	AI090153	MAP2K7	0.641070	5.073143e-11	2.345517e-6	4.886494e-8
49	202894_at	209217_s_at	BC000464	WDR45	0.640020	5.579166e-11	2.579472e-6	5.264228e-8
50	202894_at	211433_x_at	AL583909	KIAA1539	0.639646	5.770964e-11	2.668147e-6	5.336295e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation