[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
4553	203925_at	NM_002061	GCLM		glutamate-cysteine ligase, modifier subunit
20155	236140_at	AI753488	GCLM		glutamate-cysteine ligase, modifier subunit

Fetching correlation data, please wait...
Getting list of correlations for id 4553.
Getting list of p-values for id 4553.
1 of 2 done.
Getting list of correlations for id 20155.
Getting list of p-values for id 20155.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.219 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	203925_at	236305_at	AI769245	RFESD	0.733947	1.985527e-15	9.179886e-11	9.179886e-11
2	203925_at	202923_s_at	NM_001498	GCLC	0.730447	3.137831e-15	1.450745e-10	7.253724e-11
3	236140_at	234986_at	AA630626		0.725689	5.779428e-15	2.672061e-10	8.906870e-11
4	236140_at	208924_at	AB024703	RNF11	0.724277	6.910494e-15	3.194998e-10	7.987495e-11
5	236140_at	202131_s_at	NM_003831	RIOK3	0.722096	9.088802e-15	4.202117e-10	8.404234e-11
6	236140_at	200608_s_at	NM_006265	RAD21	0.700764	1.163818e-13	5.380796e-9	8.967993e-10
7	236140_at	209112_at	BC001971	CDKN1B	0.700189	1.242787e-13	5.745902e-9	8.208431e-10
8	236140_at	204314_s_at	NM_004379	CREB1	0.699085	1.409028e-13	6.514499e-9	8.143124e-10
9	236140_at	209451_at	U59863	TANK	0.698914	1.436642e-13	6.642169e-9	7.380187e-10
10	236140_at	201437_s_at	NM_001968	EIF4E	0.697380	1.708792e-13	7.900429e-9	7.900429e-10
11	203925_at	228107_at	BF510533	LOC100127983	0.695415	2.130520e-13	9.850246e-9	8.954769e-10
12	203925_at	203097_s_at	NM_014247	RAPGEF2	0.689988	3.882253e-13	1.794921e-8	1.495767e-9
13	236140_at	212989_at	AI377497	SGMS1	0.684564	6.981818e-13	3.227974e-8	2.483057e-9
14	203925_at	202886_s_at	M65254	PPP2R1B	0.683852	7.533615e-13	3.483092e-8	2.487923e-9
15	236140_at	205837_s_at	BC005319		0.683287	8.001419e-13	3.699376e-8	2.466251e-9
16	236140_at	210907_s_at	BC002506	PDCD10	0.683159	8.111170e-13	3.750118e-8	2.343824e-9
17	203925_at	217879_at	AL566824	CDC27	0.681954	9.218594e-13	4.262125e-8	2.507132e-9
18	203925_at	206302_s_at	NM_019094		0.680743	1.047663e-12	4.843767e-8	2.690982e-9
19	236140_at	222808_at	BC005336	ALG13	0.679937	1.140501e-12	5.272990e-8	2.775258e-9
20	203925_at	205548_s_at	NM_006806	BTG3	0.678150	1.375216e-12	6.358173e-8	3.179086e-9
21	236140_at	212293_at	BG111260	HIPK1	0.676414	1.647276e-12	7.616016e-8	3.626674e-9
22	203925_at	206145_at	NM_000324	RHAG	0.675518	1.807361e-12	8.356153e-8	3.798251e-9
23	236140_at	225123_at	BE883841		0.673389	2.249814e-12	1.040179e-7	4.522517e-9
24	203925_at	225998_at	AK022142	GAB1	0.672765	2.398119e-12	1.108746e-7	4.619776e-9
25	236140_at	202362_at	NM_002884	RAP1A	0.672413	2.486063e-12	1.149406e-7	4.597625e-9
26	203925_at	225800_at	AI990891	JAZF1	0.671947	2.606887e-12	1.205268e-7	4.635648e-9
27	236140_at	202698_x_at	NM_001861	COX4I1	-0.671835	2.636782e-12	1.219090e-7	4.515148e-9
28	203925_at	244103_at	AW963092	C1orf55	0.671400	2.756061e-12	1.274237e-7	4.550847e-9
29	236140_at	224892_at	BF680495	PLDN	0.670701	2.958799e-12	1.367971e-7	4.717141e-9
30	236140_at	224731_at	BF673940	HMGB1	0.669731	3.263926e-12	1.509043e-7	5.030144e-9
31	236140_at	223077_at	AW576360	TMOD3	0.669378	3.382257e-12	1.563753e-7	5.044363e-9
32	236140_at	214800_x_at	R83000	BTF3	0.669335	3.397217e-12	1.570669e-7	4.908342e-9
33	236140_at	203362_s_at	NM_002358	MAD2L1	0.667832	3.951457e-12	1.826917e-7	5.536111e-9
34	236140_at	200934_at	NM_003472	DEK	0.666115	4.691129e-12	2.168897e-7	6.379108e-9
35	203925_at	234980_at	AI004375	TMEM56	0.665946	4.770801e-12	2.205732e-7	6.302092e-9
36	236140_at	212265_at	AL031781	QKI	0.665086	5.196266e-12	2.402442e-7	6.673449e-9
37	236140_at	233049_x_at	AF217968	STUB1	-0.664691	5.404225e-12	2.498590e-7	6.752945e-9
38	203925_at	211821_x_at	U00178	GYPA	0.664393	5.565936e-12	2.573355e-7	6.771987e-9
39	236140_at	200047_s_at	NM_003403	YY1	0.663679	5.972878e-12	2.761501e-7	7.080771e-9
40	203925_at	213134_x_at	AI765445	BTG3	0.663298	6.201354e-12	2.867134e-7	7.167835e-9
41	236140_at	219787_s_at	NM_018098	ECT2	0.662454	6.738206e-12	3.115342e-7	7.598396e-9
42	236140_at	226099_at	AI924426	ELL2	0.662020	7.031896e-12	3.251127e-7	7.740778e-9
43	236140_at	227391_x_at	BE674143	LRRFIP1	0.660551	8.117884e-12	3.753223e-7	8.728425e-9
44	236140_at	203253_s_at	NM_015216	PPIP5K2	0.658802	9.622768e-12	4.448991e-7	1.011134e-8
45	236140_at	213102_at	Z78330	ACTR3	0.655868	1.276647e-11	5.902449e-7	1.311655e-8
46	203925_at	212330_at	R60866	TFDP1	0.654583	1.443500e-11	6.673879e-7	1.450843e-8
47	203925_at	207220_at	NM_021071	ART4	0.653820	1.552363e-11	7.177195e-7	1.527063e-8
48	203925_at	211820_x_at	U00179		0.653127	1.657928e-11	7.665263e-7	1.596930e-8
49	236140_at	212205_at	AA534860	H2AFV	0.653116	1.659632e-11	7.673141e-7	1.565947e-8
50	236140_at	226283_at	BF131947	POC1B	0.652831	1.705033e-11	7.883052e-7	1.576610e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation