[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
14544	223811_s_at	BC003550	GET4		golgi to ER traffic protein 4 homolog (S. cerevisiae)
14983	224808_s_at	AI090768	GET4		golgi to ER traffic protein 4 homolog (S. cerevisiae)

Fetching correlation data, please wait...
Getting list of correlations for id 14544.
Getting list of p-values for id 14544.
1 of 2 done.
Getting list of correlations for id 14983.
Getting list of p-values for id 14983.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.256 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	224808_s_at	215460_x_at	AL080149	BRD1	0.756780	8.324826e-17	3.848900e-12	3.848900e-12
2	224808_s_at	204022_at	AI668780	WWP2	0.720329	1.132677e-14	5.236818e-10	2.618409e-10
3	224808_s_at	204520_x_at	NM_014577	BRD1	0.715690	2.002798e-14	9.259736e-10	3.086579e-10
4	224808_s_at	209429_x_at	AF112207	EIF2B4	0.708958	4.490559e-14	2.076165e-9	5.190412e-10
5	223811_s_at	219257_s_at	NM_021972	SPHK1	0.706205	6.205842e-14	2.869209e-9	5.738418e-10
6	224808_s_at	215482_s_at	AJ011307	EIF2B4	0.697232	1.737583e-13	8.033542e-9	1.338924e-9
7	224808_s_at	225371_at	AI638714	GLE1	0.695318	2.153616e-13	9.957029e-9	1.422433e-9
8	224808_s_at	225451_at	AL136847	GRIPAP1	0.693756	2.562952e-13	1.184955e-8	1.481194e-9
9	223811_s_at	91952_at	AI363375	DCAF15	0.690502	3.670015e-13	1.696795e-8	1.885327e-9
10	223811_s_at	218075_at	NM_015665	AAAS	0.685284	6.463260e-13	2.988223e-8	2.988223e-9
11	224808_s_at	205213_at	NM_014716	ACAP1	0.684392	7.111208e-13	3.287796e-8	2.988905e-9
12	223811_s_at	200707_at	NM_002743	PRKCSH	0.682466	8.731141e-13	4.036756e-8	3.363963e-9
13	224808_s_at	214728_x_at	AK026573	SMARCA4	0.679389	1.207972e-12	5.584938e-8	4.296106e-9
14	223811_s_at	200051_at	NM_005146	SART1	0.679048	1.251943e-12	5.788232e-8	4.134452e-9
15	223811_s_at	200646_s_at	NM_006184	NUCB1	0.678138	1.376952e-12	6.366202e-8	4.244135e-9
16	224808_s_at	234926_s_at	AK026118	C20orf43	0.677114	1.531898e-12	7.082576e-8	4.426610e-9
17	224808_s_at	231777_at	NM_021221		0.676062	1.708469e-12	7.898934e-8	4.646432e-9
18	224808_s_at	232946_s_at	AL512694	NADSYN1	0.675672	1.778898e-12	8.224558e-8	4.569199e-9
19	223811_s_at	221849_s_at	AA733079	DCAF15	0.674422	2.023415e-12	9.355056e-8	4.923714e-9
20	223811_s_at	215631_s_at	AL050008	BRMS1	0.672766	2.397851e-12	1.108622e-7	5.543111e-9
21	223811_s_at	1555789_s_at	AY099328	PHF23	0.671848	2.633448e-12	1.217548e-7	5.797849e-9
22	224808_s_at	226906_s_at	AL548053	ARHGAP9	0.671532	2.719302e-12	1.257242e-7	5.714737e-9
23	223811_s_at	224613_s_at	BF115518	DNAJC5	0.671307	2.782346e-12	1.286390e-7	5.592999e-9
24	224808_s_at	226323_at	AA398517	ZNF830	0.670797	2.930229e-12	1.354762e-7	5.644843e-9
25	223811_s_at	211630_s_at	L42531	GSS	0.670455	3.033545e-12	1.402529e-7	5.610117e-9
26	224808_s_at	212787_at	AI952986	YLPM1	0.670215	3.108101e-12	1.437000e-7	5.526922e-9
27	224808_s_at	218586_at	NM_018270	C20orf20	0.669718	3.268389e-12	1.511107e-7	5.596693e-9
28	224808_s_at	212199_at	AL566962	MRFAP1L1	0.669477	3.348860e-12	1.548312e-7	5.529685e-9
29	224808_s_at	201173_x_at	NM_006600	NUDC	0.668956	3.529346e-12	1.631758e-7	5.626750e-9
30	224808_s_at	215714_s_at	AF254822	SMARCA4	0.668038	3.870530e-12	1.789501e-7	5.965003e-9
31	224808_s_at	215004_s_at	AC004475	SUGP1	0.667923	3.915364e-12	1.810229e-7	5.839449e-9
32	224808_s_at	202573_at	AL530441	CSNK1G2	0.665142	5.167425e-12	2.389107e-7	7.465961e-9
33	224808_s_at	202337_at	NM_007221	PMF1	0.663661	5.983140e-12	2.766245e-7	8.382561e-9
34	224808_s_at	202681_at	AI346043	USP4	0.663163	6.284751e-12	2.905692e-7	8.546153e-9
35	223811_s_at	202927_at	NM_006221	PIN1	0.662312	6.833335e-12	3.159324e-7	9.026640e-9
36	224808_s_at	208984_x_at	BC004181	RBM10	0.662256	6.870466e-12	3.176491e-7	8.823586e-9
37	223811_s_at	215714_s_at	AF254822	SMARCA4	0.660448	8.199897e-12	3.791140e-7	1.024633e-8
38	224808_s_at	209431_s_at	AF254083	PATZ1	0.660357	8.273136e-12	3.825002e-7	1.006579e-8
39	224808_s_at	214703_s_at	AW954107	MAN2B2	0.659136	9.315559e-12	4.306956e-7	1.104348e-8
40	223811_s_at	203976_s_at	NM_005483	CHAF1A	0.658831	9.595754e-12	4.436501e-7	1.109125e-8
41	224808_s_at	221495_s_at	AF322111	TCF25	0.658770	9.652319e-12	4.462653e-7	1.088452e-8
42	224808_s_at	212627_s_at	AL581473	EXOSC7	0.658086	1.031281e-11	4.768026e-7	1.135244e-8
43	223811_s_at	1558215_s_at	AU145147	UBTF	0.657765	1.063747e-11	4.918127e-7	1.143750e-8
44	223811_s_at	212085_at	AA916851	SLC25A6	0.656726	1.175725e-11	5.435847e-7	1.235420e-8
45	224808_s_at	224776_at	BF513102	AGPAT6	0.656697	1.178958e-11	5.450796e-7	1.211288e-8
46	224808_s_at	218019_s_at	NM_021941	PDXK	0.656082	1.250754e-11	5.782735e-7	1.257116e-8
47	224808_s_at	225649_s_at	AA001414	STK35	0.655811	1.283601e-11	5.934603e-7	1.262681e-8
48	223811_s_at	218813_s_at	NM_020145	SH3GLB2	0.655138	1.368966e-11	6.329275e-7	1.318599e-8
49	224808_s_at	200094_s_at	AI004246	EEF2	0.654329	1.478857e-11	6.837349e-7	1.395377e-8
50	224808_s_at	203985_at	NM_012256	ZNF212	0.653456	1.606936e-11	7.429509e-7	1.485902e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation