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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
307	1554345_a_at	BC015325	GIN1		gypsy retrotransposon integrase 1
12405	219467_at	NM_017676	GIN1		gypsy retrotransposon integrase 1

Fetching correlation data, please wait...
Getting list of correlations for id 307.
Getting list of p-values for id 307.
1 of 2 done.
Getting list of correlations for id 12405.
Getting list of p-values for id 12405.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.216 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	1554345_a_at	225769_at	AF116827	COG6	0.725956	5.585999e-15	2.582631e-10	2.582631e-10
2	219467_at	228024_at	AW028100	VPS37A	0.713254	2.689472e-14	1.243451e-9	6.217253e-10
3	1554345_a_at	201659_s_at	NM_001177	ARL1	0.708901	4.520941e-14	2.090212e-9	6.967372e-10
4	219467_at	213878_at	AI685944	PYROXD1	0.704664	7.426739e-14	3.433678e-9	8.584196e-10
5	1554345_a_at	219467_at	NM_017676	GIN1	0.701399	1.082267e-13	5.003752e-9	1.000750e-9
6	219467_at	1554345_a_at	BC015325	GIN1	0.701399	1.082267e-13	5.003752e-9	8.339586e-10
7	219467_at	1552625_a_at	AB063105	TRNT1	0.697628	1.661564e-13	7.682073e-9	1.097439e-9
8	219467_at	213292_s_at	AA908770	SNX13	0.693202	2.725583e-13	1.260146e-8	1.575182e-9
9	219467_at	201659_s_at	NM_001177	ARL1	0.687578	5.046741e-13	2.333310e-8	2.592567e-9
10	219467_at	201881_s_at	NM_005744	ARIH1	0.687510	5.083911e-13	2.350495e-8	2.350495e-9
11	219467_at	235025_at	AW196959	WDR89	0.684846	6.773812e-13	3.131804e-8	2.847095e-9
12	1554345_a_at	214700_x_at	AK000323	RIF1	0.675056	1.895649e-12	8.764343e-8	7.303619e-9
13	219467_at	227124_at	AI870473	LOC221710	0.674483	2.010937e-12	9.297366e-8	7.151820e-9
14	1554345_a_at	223336_s_at	AL136734	RAB18	0.671958	2.604109e-12	1.203984e-7	8.599884e-9
15	219467_at	219217_at	NM_024678	NARS2	0.671898	2.619961e-12	1.211313e-7	8.075420e-9
16	1554345_a_at	1555910_at	AK056761	PTCD2	0.671152	2.826615e-12	1.306857e-7	8.167857e-9
17	1554345_a_at	225378_at	AI866426	VPS37A	0.668692	3.624562e-12	1.675780e-7	9.857529e-9
18	219467_at	231975_s_at	AK002183	MIER3	0.666532	4.499880e-12	2.080475e-7	1.155819e-8
19	219467_at	203053_at	NM_005872	BCAS2	0.665866	4.808635e-12	2.223224e-7	1.170118e-8
20	1554345_a_at	201821_s_at	BC004439	TIMM17A	0.665691	4.893350e-12	2.262391e-7	1.131196e-8
21	219467_at	223021_x_at	BF241590	VTA1	0.664207	5.669258e-12	2.621125e-7	1.248155e-8
22	219467_at	202541_at	BF589679	AIMP1	0.663474	6.094508e-12	2.817735e-7	1.280789e-8
23	219467_at	218304_s_at	NM_022776	OSBPL11	0.663079	6.336947e-12	2.929824e-7	1.273837e-8
24	1554345_a_at	201512_s_at	BC003633	TOMM70A	0.659601	8.904449e-12	4.116883e-7	1.715368e-8
25	219467_at	234947_s_at	AK026630	C10orf84	0.659375	9.102009e-12	4.208223e-7	1.683289e-8
26	219467_at	224845_s_at	AU159395	SLAIN2	0.658881	9.548758e-12	4.414773e-7	1.697990e-8
27	219467_at	218549_s_at	NM_016033	FAM82B	0.656056	1.253825e-11	5.796935e-7	2.147013e-8
28	219467_at	201512_s_at	BC003633	TOMM70A	0.655220	1.358338e-11	6.280141e-7	2.242907e-8
29	219467_at	202352_s_at	AI446530	PSMD12	0.653900	1.540483e-11	7.122268e-7	2.455954e-8
30	219467_at	235980_at	AA767763	PIK3CA	0.653576	1.588776e-11	7.345546e-7	2.448515e-8
31	219467_at	219449_s_at	NM_017866	TMEM70	0.651782	1.882928e-11	8.705530e-7	2.808236e-8
32	1554345_a_at	225448_at	AL519376	NAPG	0.651083	2.011165e-11	9.298420e-7	2.905756e-8
33	219467_at	213341_at	AI862658	FEM1C	0.650909	2.044319e-11	9.451703e-7	2.864153e-8
34	219467_at	218289_s_at	NM_024818	UBA5	0.649122	2.417160e-11	1.117550e-6	3.286912e-8
35	219467_at	228569_at	AV683473	PAPOLA	0.649015	2.441450e-11	1.128780e-6	3.225086e-8
36	219467_at	225161_at	AI659020	GFM1	0.648800	2.490927e-11	1.151655e-6	3.199042e-8
37	1554345_a_at	203584_at	NM_014673	TTC35	0.648233	2.626154e-11	1.214176e-6	3.281557e-8
38	219467_at	202543_s_at	BC005359	GMFB	0.647943	2.697969e-11	1.247379e-6	3.282576e-8
39	1554345_a_at	203350_at	NM_001128	AP1G1	0.647655	2.771377e-11	1.281319e-6	3.285432e-8
40	1554345_a_at	203403_s_at	NM_005977	RNF6	0.647616	2.781440e-11	1.285971e-6	3.214928e-8
41	219467_at	225884_s_at	AL046381	GZF1	0.647240	2.880197e-11	1.331630e-6	3.247879e-8
42	1554345_a_at	203599_s_at	NM_007187	WBP4	0.647108	2.915737e-11	1.348062e-6	3.209671e-8
43	1554345_a_at	225161_at	AI659020	GFM1	0.646122	3.194434e-11	1.476915e-6	3.434686e-8
44	219467_at	230300_at	N22849		0.645907	3.258573e-11	1.506569e-6	3.424020e-8
45	219467_at	207121_s_at	NM_002748	MAPK6	0.644596	3.676799e-11	1.699931e-6	3.777625e-8
46	219467_at	219421_at	NM_012382	TTC33	0.644289	3.781981e-11	1.748561e-6	3.801220e-8
47	219467_at	212453_at	AB033105	KIAA1279	0.643691	3.995010e-11	1.847053e-6	3.929900e-8
48	1554345_a_at	214658_at	BG286537		0.643413	4.098090e-11	1.894711e-6	3.947315e-8
49	219467_at	219321_at	NM_022474	MPP5	0.643088	4.221738e-11	1.951879e-6	3.983426e-8
50	219467_at	218877_s_at	NM_021820	TRMT11	0.642045	4.643154e-11	2.146716e-6	4.293432e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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