[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
13032	221256_s_at	NM_031219	HDHD3		haloacid dehalogenase-like hydrolase domain containing 3

Fetching correlation data, please wait...
Getting list of correlations for id 13032.
Getting list of p-values for id 13032.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.122 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	221256_s_at	37425_g_at	AB029343	CCHCR1	0.595967	2.221331e-9	5.135051e-5	5.135051e-5
2	221256_s_at	221972_s_at	AL571362	SDF4	0.571682	1.348492e-8	3.117309e-4	1.558654e-4
3	221256_s_at	224615_x_at	AL110115	HM13	0.568366	1.705791e-8	3.943276e-4	1.314425e-4
4	221256_s_at	201377_at	NM_014847	UBAP2L	0.563357	2.421068e-8	5.596783e-4	1.399196e-4
5	221256_s_at	218317_x_at	NM_024044		0.556073	3.987372e-8	9.217608e-4	1.843522e-4
6	221256_s_at	202671_s_at	NM_003681	PDXK	0.555249	4.215978e-8	9.746077e-4	1.624346e-4
7	221256_s_at	202715_at	NM_004341	CAD	0.547777	6.938665e-8	1.604011e-3	2.291445e-4
8	221256_s_at	202993_at	NM_006844	ILVBL	0.544783	8.443082e-8	1.951787e-3	2.439734e-4
9	221256_s_at	218220_at	NM_021640	C12orf10	0.543495	9.181412e-8	2.122467e-3	2.358297e-4
10	221256_s_at	216863_s_at	AC004542	MORC2	0.540639	1.104385e-7	2.553007e-3	2.553007e-4
11	221256_s_at	201082_s_at	NM_004082	DCTN1	0.538204	1.290944e-7	2.984275e-3	2.712977e-4
12	221256_s_at	214437_s_at	NM_005412	SHMT2	0.537676	1.335177e-7	3.086530e-3	2.572108e-4
13	221256_s_at	200707_at	NM_002743	PRKCSH	0.536613	1.428585e-7	3.302460e-3	2.540354e-4
14	221256_s_at	217782_s_at	NM_004127	GPS1	0.535758	1.508217e-7	3.486545e-3	2.490389e-4
15	221256_s_at	204610_s_at	NM_006848	CCDC85B	0.534274	1.656527e-7	3.829394e-3	2.552929e-4
16	221256_s_at	217840_at	NM_016222	DDX41	0.530583	2.087612e-7	4.825933e-3	3.016208e-4
17	221256_s_at	216602_s_at	AD000092	FARSA	0.529205	2.274345e-7	5.257603e-3	3.092708e-4
18	221256_s_at	1555831_s_at	BC004948	LRRC41	0.528819	2.329488e-7	5.385077e-3	2.991709e-4
19	221256_s_at	203941_at	NM_018250	INTS9	0.525939	2.782190e-7	6.431589e-3	3.385047e-4
20	221256_s_at	201797_s_at	NM_006295	VARS	0.525849	2.797615e-7	6.467247e-3	3.233623e-4
21	221256_s_at	222425_s_at	AW151250	POLDIP2	0.524334	3.069310e-7	7.095323e-3	3.378725e-4
22	221256_s_at	201284_s_at	NM_001640	APEH	0.519947	4.004830e-7	9.257966e-3	4.208166e-4
23	221256_s_at	223241_at	AF121858	SNX8	0.519715	4.060917e-7	9.387622e-3	4.081575e-4
24	221256_s_at	201378_s_at	NM_014847	UBAP2L	0.518473	4.375539e-7	1.011493e-2	4.214555e-4
25	221256_s_at	216232_s_at	AI697055	GCN1L1	0.515062	5.361913e-7	1.239513e-2	4.958053e-4
26	221256_s_at	231715_s_at	NM_013328		0.512256	6.327404e-7	1.462706e-2	5.625792e-4
27	221256_s_at	201482_at	NM_002826	QSOX1	0.512181	6.355423e-7	1.469183e-2	5.441419e-4
28	221256_s_at	238670_at	AI144156	RAD18	0.510836	6.876789e-7	1.589707e-2	5.677526e-4
29	221256_s_at	221512_at	AL136683	TMEM222	0.510234	7.122847e-7	1.646589e-2	5.677891e-4
30	221256_s_at	212861_at	BF690150	MFSD5	0.506039	9.084329e-7	2.100024e-2	7.000081e-4
31	221256_s_at	202477_s_at	NM_006659	TUBGCP2	0.505350	9.451653e-7	2.184939e-2	7.048189e-4
32	221256_s_at	201932_at	NM_006369	LRRC41	0.503633	1.042888e-6	2.410843e-2	7.533885e-4
33	221256_s_at	1861_at	U66879	BAD	0.503571	1.046560e-6	2.419332e-2	7.331311e-4
34	221256_s_at	221216_s_at	NM_012236	SCMH1	0.500439	1.250581e-6	2.890968e-2	8.502848e-4
35	221256_s_at	218480_at	NM_021831	AGBL5	0.499786	1.297626e-6	2.999721e-2	8.570631e-4
36	221256_s_at	218526_s_at	NM_014185	RANGRF	0.498956	1.359784e-6	3.143413e-2	8.731702e-4
37	221256_s_at	201618_x_at	NM_003801	GPAA1	0.498827	1.369735e-6	3.166416e-2	8.557881e-4
38	221256_s_at	224472_x_at	BC006211	SDF4	0.498726	1.377524e-6	3.184423e-2	8.380060e-4
39	221256_s_at	218565_at	BG223334	C9orf114	0.498706	1.379116e-6	3.188102e-2	8.174622e-4
40	221256_s_at	221539_at	AB044548	EIF4EBP1	0.497968	1.437495e-6	3.323057e-2	8.307643e-4
41	221256_s_at	200837_at	NM_005745	BCAP31	0.497607	1.466897e-6	3.391027e-2	8.270797e-4
42	221256_s_at	213126_at	BG230758	MED8	0.497389	1.484921e-6	3.432692e-2	8.173076e-4
43	221256_s_at	218749_s_at	NM_024959	SLC24A6	0.497332	1.489700e-6	3.443739e-2	8.008696e-4
44	221256_s_at	214258_x_at	AA886971	KAT5	0.497082	1.510676e-6	3.492229e-2	7.936884e-4
45	221256_s_at	222995_s_at	AF226732	RHBDD2	0.496922	1.524306e-6	3.523738e-2	7.830528e-4
46	221256_s_at	58994_at	AI689402	CC2D1A	0.496411	1.568419e-6	3.625715e-2	7.881988e-4
47	221256_s_at	201115_at	NM_006230	POLD2	0.496325	1.576012e-6	3.643267e-2	7.751633e-4
48	221256_s_at	217805_at	NM_004516	ILF3	0.496243	1.583266e-6	3.660037e-2	7.625077e-4
49	221256_s_at	1553978_at	BC010931	LOC729991	0.495859	1.617583e-6	3.739366e-2	7.631360e-4
50	221256_s_at	216038_x_at	BE965715	DAXX	0.495594	1.641586e-6	3.794855e-2	7.589711e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation