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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
9184	212964_at	AI912206	HIC2		hypermethylated in cancer 2
9185	212966_at	AL043112	HIC2		hypermethylated in cancer 2

Fetching correlation data, please wait...
Getting list of correlations for id 9184.
Getting list of p-values for id 9184.
1 of 2 done.
Getting list of correlations for id 9185.
Getting list of p-values for id 9185.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.267 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	212966_at	232012_at	AV691296	CAPN1	0.786822	7.218859e-19	3.337567e-14	3.337567e-14
2	212966_at	212520_s_at	AI684141	SMARCA4	0.773409	6.576563e-18	3.040608e-13	1.520304e-13
3	212966_at	208987_s_at	AK024505	KDM2A	0.766278	2.003744e-17	9.264110e-13	3.088037e-13
4	212966_at	203103_s_at	NM_014502	PRPF19	0.764974	2.446235e-17	1.130992e-12	2.827480e-13
5	212966_at	208974_x_at	BC003572	KPNB1	0.756931	8.142094e-17	3.764416e-12	7.528831e-13
6	212966_at	226554_at	AW445134	ZBTB7A	0.755235	1.043046e-16	4.822420e-12	8.037367e-13
7	212966_at	203975_s_at	BF000239	CHAF1A	0.748291	2.816395e-16	1.302132e-11	1.860189e-12
8	212966_at	215032_at	AK022442	RREB1	0.747761	3.033963e-16	1.402722e-11	1.753403e-12
9	212966_at	212964_at	AI912206	HIC2	0.746615	3.561891e-16	1.646805e-11	1.829783e-12
10	212964_at	212966_at	AL043112	HIC2	0.746615	3.561891e-16	1.646805e-11	1.646805e-12
11	212966_at	202102_s_at	BF718610	BRD4	0.744445	4.815074e-16	2.226201e-11	2.023820e-12
12	212966_at	231861_at	AK025898	LRP10	0.733434	2.124270e-15	9.821348e-11	8.184457e-12
13	212966_at	202844_s_at	AW025261	RALBP1	0.731278	2.816659e-15	1.302254e-10	1.001734e-11
14	212964_at	225472_at	AF129756	BAT4	0.727144	4.801040e-15	2.219713e-10	1.585509e-11
15	212966_at	212931_at	AB006630	TCF20	0.725379	6.011407e-15	2.779314e-10	1.852876e-11
16	212966_at	203836_s_at	D84476	MAP3K5	0.724239	6.943749e-15	3.210373e-10	2.006483e-11
17	212966_at	219180_s_at	AI817074	PEX26	0.723804	7.335282e-15	3.391394e-10	1.994938e-11
18	212966_at	229001_at	BE259127	PPP1R3E	0.722500	8.641521e-15	3.995321e-10	2.219623e-11
19	212966_at	230528_s_at	AI651726	MGC2752	0.720675	1.085141e-14	5.017043e-10	2.640549e-11
20	212966_at	222351_at	AW009884	PPP2R1B	0.719532	1.250288e-14	5.780583e-10	2.890291e-11
21	212966_at	230494_at	AI671885	SLC20A1	0.718947	1.343913e-14	6.213448e-10	2.958785e-11
22	212964_at	214426_x_at	BF062223	CHAF1A	0.718588	1.404728e-14	6.494619e-10	2.952099e-11
23	212966_at	242352_at	AW272262	NIPBL	0.718270	1.460777e-14	6.753758e-10	2.936416e-11
24	212966_at	222621_at	BF591419	DNAJC1	0.713053	2.755363e-14	1.273914e-9	5.307976e-11
25	212966_at	1555495_a_at	BC012117	CWC27	0.712081	3.096394e-14	1.431587e-9	5.726347e-11
26	212964_at	202535_at	NM_003824	FADD	0.711954	3.143956e-14	1.453577e-9	5.590680e-11
27	212966_at	241843_at	AA215701	SNORA28	0.711257	3.417280e-14	1.579945e-9	5.851649e-11
28	212966_at	226786_at	BF507952	RFX1	0.709572	4.175681e-14	1.930584e-9	6.894944e-11
29	212966_at	220739_s_at	NM_017623	CNNM3	0.708980	4.478706e-14	2.070685e-9	7.140293e-11
30	212966_at	230885_at	BE670386	SPG7	0.706267	6.161599e-14	2.848754e-9	9.495845e-11
31	212966_at	214924_s_at	AK000754	TRAK1	0.705969	6.379305e-14	2.949408e-9	9.514219e-11
32	212966_at	214464_at	NM_003607	CDC42BPA	0.705478	6.755859e-14	3.123504e-9	9.760949e-11
33	212966_at	225167_at	AW515645	FRMD4A	0.704194	7.843285e-14	3.626264e-9	1.098868e-10
34	212964_at	222768_s_at	BE897074	TRMT6	0.702794	9.219789e-14	4.262677e-9	1.253729e-10
35	212966_at	242851_at	BE964989	KIAA1919	0.702285	9.776634e-14	4.520129e-9	1.291465e-10
36	212966_at	222768_s_at	BE897074	TRMT6	0.699983	1.272291e-13	5.882308e-9	1.633975e-10
37	212966_at	1559399_s_at	BC015986	ZCCHC10	0.698847	1.447663e-13	6.693125e-9	1.808953e-10
38	212966_at	40465_at	AF026402	DDX23	0.697268	1.730379e-13	8.000234e-9	2.105325e-10
39	212966_at	1558719_s_at	BG059052	RPAIN	0.697131	1.757338e-13	8.124878e-9	2.083302e-10
40	212966_at	201440_at	NM_004818	DDX23	0.695627	2.080549e-13	9.619212e-9	2.404803e-10
41	212966_at	205322_s_at	AW182367	MTF1	0.694409	2.383480e-13	1.101978e-8	2.687752e-10
42	212966_at	214911_s_at	S78771	BRD2	0.694372	2.393406e-13	1.106567e-8	2.634684e-10
43	212966_at	201183_s_at	AI613273	CHD4	0.694286	2.416416e-13	1.117206e-8	2.598152e-10
44	212966_at	212069_s_at	AK026025	BAT2L1	0.693528	2.628798e-13	1.215398e-8	2.762269e-10
45	212966_at	243524_at	AI571719		0.693116	2.751419e-13	1.272091e-8	2.826869e-10
46	212966_at	227215_at	AI337304	GOPC	0.692822	2.842570e-13	1.314234e-8	2.857030e-10
47	212964_at	1553978_at	BC010931	LOC729991	0.690752	3.570767e-13	1.650908e-8	3.512571e-10
48	212964_at	201440_at	NM_004818	DDX23	0.690661	3.606401e-13	1.667383e-8	3.473715e-10
49	212964_at	219110_at	NM_018983	GAR1	0.690345	3.733551e-13	1.726170e-8	3.522796e-10
50	212964_at	215032_at	AK022442	RREB1	0.690065	3.849788e-13	1.779911e-8	3.559822e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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