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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
9741	213831_at	X00452	HLA-DQA1		major histocompatibility complex, class II, DQ alpha 1
20177	236203_at	AI377755	HLA-DQA1		major histocompatibility complex, class II, DQ alpha 1

Fetching correlation data, please wait...
Getting list of correlations for id 9741.
Getting list of p-values for id 9741.
1 of 2 done.
Getting list of correlations for id 20177.
Getting list of p-values for id 20177.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.181 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	213831_at	209480_at	M16276	HLA-DQB1	0.977758	2.138822e-57	9.888628e-53	9.888628e-53
2	236203_at	209480_at	M16276	HLA-DQB1	0.935911	6.487518e-39	2.999439e-34	1.499719e-34
3	236203_at	213831_at	X00452	HLA-DQA1	0.928701	4.437922e-37	2.051829e-32	6.839429e-33
4	213831_at	236203_at	AI377755	HLA-DQA1	0.928701	4.437922e-37	2.051829e-32	5.129572e-33
5	213831_at	212999_x_at	AW276186	HLA-DQB1	0.914423	5.912406e-34	2.733542e-29	5.467084e-30
6	213831_at	211654_x_at	M17565	HLA-DQB1	0.895773	1.308197e-30	6.048316e-26	1.008053e-26
7	236203_at	212999_x_at	AW276186	HLA-DQB1	0.874788	1.565692e-27	7.238821e-23	1.034117e-23
8	236203_at	211654_x_at	M17565	HLA-DQB1	0.797931	1.023329e-19	4.731261e-15	5.914077e-16
9	213831_at	212998_x_at	AI583173	HLA-DQB1	0.790247	4.002586e-19	1.850556e-14	2.056173e-15
10	236203_at	212998_x_at	AI583173	HLA-DQB1	0.668528	3.684672e-12	1.703571e-7	1.703571e-8
11	236203_at	217632_at	BF035279	GNL3L	0.424422	5.732557e-5	2.650390e+0	2.409446e-1
12	236203_at	215160_x_at	AL441988	LOC642236	0.416928	7.973584e-5	3.686507e+0	3.072089e-1
13	236203_at	235907_at	BE245080	TMEM33	0.407647	1.187192e-4	5.488865e+0	4.222203e-1
14	213831_at	215160_x_at	AL441988	LOC642236	0.406832	1.228743e-4	5.680971e+0	4.057836e-1
15	236203_at	226662_at	AW085575	STX17	0.405925	1.276577e-4	5.902125e+0	3.934750e-1
16	213831_at	238658_at	AA832474		0.401947	1.507383e-4	6.969234e+0	4.355771e-1
17	236203_at	219694_at	NM_019018	FAM105A	0.397391	1.818690e-4	8.408529e+0	4.946194e-1
18	213831_at	1554053_at	BC007085	SPTLC1	0.395096	1.997100e-4	9.233390e+0	5.129661e-1
19	236203_at	238658_at	AA832474		0.390149	2.437765e-4	1.127076e+1	5.931979e-1
20	213831_at	217632_at	BF035279	GNL3L	0.385957	2.879401e-4	1.331262e+1	6.656310e-1
21	236203_at	236122_at	H40696		0.383886	3.123743e-4	1.444231e+1	6.877292e-1
22	236203_at	235215_at	AI694544	ERCC4	0.382646	3.279016e-4	1.516020e+1	6.891002e-1
23	213831_at	235907_at	BE245080	TMEM33	0.380296	3.592914e-4	1.661148e+1	7.222381e-1
24	236203_at	238504_at	AA521023	C6orf57	0.379432	3.715071e-4	1.717626e+1	7.156774e-1
25	236203_at	226537_at	AW418666	HINT3	0.378742	3.815396e-4	1.764010e+1	7.056040e-1
26	213831_at	244661_at	AA946876		0.376172	4.211273e-4	1.947040e+1	7.488615e-1
27	236203_at	233780_at	AI003806	RIF1	0.375968	4.244163e-4	1.962246e+1	7.267579e-1
28	213831_at	220370_s_at	NM_025090	USP36	0.375124	4.383192e-4	2.026525e+1	7.237589e-1
29	236203_at	227049_at	N21127	ZADH2	0.374493	4.489805e-4	2.075817e+1	7.157988e-1
30	236203_at	207143_at	NM_001259	CDK6	0.373791	4.611156e-4	2.131922e+1	7.106406e-1
31	236203_at	1559190_s_at	AL833150	RDH13	0.373284	4.700651e-4	2.173299e+1	7.010641e-1
32	236203_at	227255_at	AI806633	PDIK1L	0.372531	4.836680e-4	2.236191e+1	6.988096e-1
33	213831_at	230502_s_at	BE501966	LOC149832	0.372001	4.934421e-4	2.281380e+1	6.913273e-1
34	213831_at	226043_at	AI242661	GPSM1	-0.369484	5.424003e-4	2.507734e+1	7.375688e-1
35	236203_at	223617_x_at	BC002542	ATAD3B	-0.366135	6.144460e-4	2.840830e+1	8.116656e-1
36	236203_at	228256_s_at	AU144565	EPB41L4A	0.364835	6.446884e-4	2.980652e+1	8.279590e-1
37	236203_at	223507_at	AL136922	CLPX	0.364796	6.456245e-4	2.984980e+1	8.067514e-1
38	213831_at	206082_at	NM_006674	HCP5	0.364263	6.584342e-4	3.044205e+1	8.011065e-1
39	213831_at	219694_at	NM_019018	FAM105A	0.363446	6.785192e-4	3.137066e+1	8.043758e-1
40	213831_at	215193_x_at	AJ297586		0.362811	6.945096e-4	3.210996e+1	8.027489e-1
41	236203_at	219332_at	NM_024723	MICALL2	-0.362295	7.077466e-4	3.272196e+1	7.980965e-1
42	213831_at	226662_at	AW085575	STX17	0.361727	7.225902e-4	3.340824e+1	7.954342e-1
43	236203_at	230502_s_at	BE501966	LOC149832	0.361290	7.341993e-4	3.394497e+1	7.894179e-1
44	236203_at	225446_at	AI638279	BRWD1	0.361091	7.395570e-4	3.419268e+1	7.771063e-1
45	213831_at	238504_at	AA521023	C6orf57	0.360824	7.467792e-4	3.452659e+1	7.672576e-1
46	236203_at	213430_at	BF224071	RUFY3	0.360680	7.507154e-4	3.470858e+1	7.545343e-1
47	236203_at	230177_at	AI884495		0.360645	7.516490e-4	3.475174e+1	7.393987e-1
48	236203_at	222541_at	AA173588	RSF1	0.360485	7.560348e-4	3.495451e+1	7.282190e-1
49	236203_at	210367_s_at	AF010316	PTGES	0.358143	8.230169e-4	3.805136e+1	7.765585e-1
50	236203_at	239355_at	BF675979		0.357925	8.295089e-4	3.835152e+1	7.670303e-1

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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