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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6650	208808_s_at	BC000903	HMGB2		high-mobility group box 2

Fetching correlation data, please wait...
Getting list of correlations for id 6650.
Getting list of p-values for id 6650.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.148 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	208808_s_at	201795_at	NM_002296	LBR	0.739831	9.050677e-16	2.092245e-11	2.092245e-11
2	208808_s_at	201441_at	NM_001863	COX6B1	-0.724815	6.456681e-15	1.492591e-10	7.462955e-11
3	208808_s_at	200080_s_at	AI955655		0.724477	6.738623e-15	1.557767e-10	5.192558e-11
4	208808_s_at	209259_s_at	AF020043	SMC3	0.722804	8.317887e-15	1.922846e-10	4.807115e-11
5	208808_s_at	200016_x_at	NM_002136	HNRNPA1	0.710128	3.908775e-14	9.035914e-10	1.807183e-10
6	208808_s_at	208766_s_at	BC001449	HNRNPR	0.685448	6.350324e-13	1.468004e-8	2.446674e-9
7	208808_s_at	209662_at	BC005383	CETN3	0.683227	8.052940e-13	1.861598e-8	2.659426e-9
8	208808_s_at	211967_at	BG538627	TMEM123	0.661687	7.264635e-12	1.679366e-7	2.099207e-8
9	208808_s_at	213404_s_at	BF033683	RHEB	0.660455	8.194813e-12	1.894395e-7	2.104883e-8
10	208808_s_at	228980_at	AI760772	RFFL	0.658245	1.015575e-11	2.347705e-7	2.347705e-8
11	208808_s_at	1555844_s_at	AL713781	HNRNPM	0.657657	1.074902e-11	2.484851e-7	2.258956e-8
12	208808_s_at	207243_s_at	NM_001743		0.651370	1.957423e-11	4.524974e-7	3.770811e-8
13	208808_s_at	205292_s_at	NM_002137	HNRNPA2B1	0.650045	2.217122e-11	5.125321e-7	3.942555e-8
14	208808_s_at	211931_s_at	BG505670		0.648251	2.621778e-11	6.060764e-7	4.329117e-8
15	208808_s_at	210501_x_at	AF119846	EIF3K	-0.645275	3.454063e-11	7.984757e-7	5.323171e-8
16	208808_s_at	201507_at	NM_002622	PFDN1	-0.637865	6.773756e-11	1.565889e-6	9.786808e-8
17	208808_s_at	208810_at	AF080569		0.634357	9.259508e-11	2.140521e-6	1.259130e-7
18	208808_s_at	201091_s_at	BE748755	CBX3	0.629767	1.385533e-10	3.202937e-6	1.779410e-7
19	208808_s_at	207168_s_at	NM_004893	H2AFY	0.629472	1.421552e-10	3.286203e-6	1.729580e-7
20	208808_s_at	200073_s_at	M94630	HNRNPD	0.627894	1.630038e-10	3.768159e-6	1.884079e-7
21	208808_s_at	221494_x_at	AF085358	EIF3K	-0.627077	1.749334e-10	4.043935e-6	1.925683e-7
22	208808_s_at	210260_s_at	BC005352	TNFAIP8	0.626624	1.818910e-10	4.204774e-6	1.911261e-7
23	208808_s_at	202673_at	NM_003859	DPM1	0.624191	2.240743e-10	5.179926e-6	2.252142e-7
24	208808_s_at	223350_x_at	N63709	LIN7C	0.623314	2.414803e-10	5.582300e-6	2.325958e-7
25	208808_s_at	222673_x_at	AI582192	FAM122B	0.616906	4.140372e-10	9.571299e-6	3.828519e-7
26	208808_s_at	202569_s_at	NM_002376	MARK3	0.615627	4.604058e-10	1.064320e-5	4.093539e-7
27	208808_s_at	218499_at	NM_016542	MST4	0.613032	5.702399e-10	1.318224e-5	4.882310e-7
28	208808_s_at	221568_s_at	AF090900	LIN7C	0.611434	6.498977e-10	1.502369e-5	5.365602e-7
29	208808_s_at	212526_at	AK002207	SPG20	0.609886	7.372028e-10	1.704192e-5	5.876523e-7
30	208808_s_at	212132_at	AL117499	LSM14A	0.609732	7.464477e-10	1.725563e-5	5.751877e-7
31	208808_s_at	219149_x_at	NM_016216	DBR1	0.609620	7.532671e-10	1.741327e-5	5.617185e-7
32	208808_s_at	1552426_a_at	NM_078474	TM2D3	0.607677	8.813290e-10	2.037368e-5	6.366775e-7
33	208808_s_at	206052_s_at	NM_006527	SLBP	0.606765	9.484147e-10	2.192450e-5	6.643789e-7
34	208808_s_at	203179_at	NM_000155	GALT	-0.605730	1.030460e-9	2.382114e-5	7.006218e-7
35	208808_s_at	227350_at	AI889959	HELLS	0.603483	1.232578e-9	2.849351e-5	8.141002e-7
36	208808_s_at	202534_x_at	NM_000791	DHFR	0.600093	1.610726e-9	3.723514e-5	1.034310e-6
37	208808_s_at	201443_s_at	AF248966	ATP6AP2	0.598293	1.854145e-9	4.286227e-5	1.158440e-6
38	208808_s_at	225304_s_at	BE741920	NDUFA11	-0.597158	2.025511e-9	4.682374e-5	1.232204e-6
39	208808_s_at	224935_at	BG165815	EIF2S3	0.596447	2.140347e-9	4.947839e-5	1.268677e-6
40	208808_s_at	221606_s_at	BC005342	HMGN5	0.596400	2.148187e-9	4.965965e-5	1.241491e-6
41	208808_s_at	209330_s_at	D55674	HNRNPD	0.593222	2.744209e-9	6.343787e-5	1.547265e-6
42	208808_s_at	200937_s_at	NM_000969	RPL5	0.592011	3.010527e-9	6.959434e-5	1.657008e-6
43	208808_s_at	202163_s_at	NM_004779	CNOT8	0.590322	3.423588e-9	7.914307e-5	1.840537e-6
44	208808_s_at	224731_at	BF673940	HMGB1	0.589465	3.653074e-9	8.444810e-5	1.919275e-6
45	208808_s_at	213857_s_at	BG230614	CD47	0.587677	4.180822e-9	9.664807e-5	2.147735e-6
46	208808_s_at	243992_at	R61857		-0.583316	5.789362e-9	1.338327e-4	2.909406e-6
47	208808_s_at	201699_at	NM_002806	PSMC6	0.583234	5.824854e-9	1.346532e-4	2.864961e-6
48	208808_s_at	208319_s_at	NM_006743	RBM3	0.582954	5.947013e-9	1.374771e-4	2.864106e-6
49	208808_s_at	222294_s_at	AW971415	RAB27A	0.582852	5.991902e-9	1.385148e-4	2.826833e-6
50	208808_s_at	203224_at	BF340123	RFK	0.582603	6.103303e-9	1.410900e-4	2.821801e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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