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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
16880	227139_s_at	AA219354	HPS3		Hermansky-Pudlak syndrome 3
20707	238539_at	BG163294	HPS3		Hermansky-Pudlak syndrome 3

Fetching correlation data, please wait...
Getting list of correlations for id 16880.
Getting list of p-values for id 16880.
1 of 2 done.
Getting list of correlations for id 20707.
Getting list of p-values for id 20707.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.216 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	227139_s_at	227413_at	BF965546	UBLCP1	0.739645	9.280574e-16	4.290781e-11	4.290781e-11
2	238539_at	1552660_a_at	BC021215	C5orf22	0.719289	1.288339e-14	5.956508e-10	2.978254e-10
3	238539_at	200776_s_at	AL518328		0.703334	8.663448e-14	4.005458e-9	1.335153e-9
4	238539_at	232591_s_at	AK022883	TMEM30A	0.695676	2.069081e-13	9.566187e-9	2.391547e-9
5	227139_s_at	218171_at	AF195514	VPS4B	0.690916	3.506911e-13	1.621385e-8	3.242770e-9
6	227139_s_at	205027_s_at	NM_005204	MAP3K8	0.690839	3.536765e-13	1.635188e-8	2.725313e-9
7	238539_at	211090_s_at	Z25435	PRPF4B	0.688094	4.772240e-13	2.206397e-8	3.151996e-9
8	238539_at	221268_s_at	NM_030791	SGPP1	0.686651	5.579033e-13	2.579410e-8	3.224262e-9
9	238539_at	220800_s_at	NM_014547	TMOD3	0.686540	5.646343e-13	2.610530e-8	2.900589e-9
10	238539_at	208653_s_at	AF263279	CD164	0.685305	6.448329e-13	2.981320e-8	2.981320e-9
11	238539_at	208811_s_at	AF080569		0.683120	8.144888e-13	3.765707e-8	3.423370e-9
12	238539_at	224311_s_at	AF151824	CAB39	0.682739	8.481809e-13	3.921480e-8	3.267900e-9
13	227139_s_at	212414_s_at	D50918		0.682270	8.914764e-13	4.121652e-8	3.170502e-9
14	238539_at	202213_s_at	AI650819	CUL4B	0.679794	1.157714e-12	5.352573e-8	3.823266e-9
15	238539_at	201399_s_at	NM_014294	TRAM1	0.678467	1.330393e-12	6.150938e-8	4.100625e-9
16	238539_at	1554878_a_at	BC009712	ABCD3	0.677854	1.418273e-12	6.557244e-8	4.098278e-9
17	238539_at	227214_at	NM_020399	GOPC	0.677647	1.449178e-12	6.700128e-8	3.941252e-9
18	238539_at	210148_at	AF305239	HIPK3	0.677501	1.471376e-12	6.802758e-8	3.779310e-9
19	238539_at	215150_at	AF090896	YOD1	0.677453	1.478824e-12	6.837193e-8	3.598523e-9
20	238539_at	224427_s_at	AY029162	PAPOLG	0.677237	1.512425e-12	6.992547e-8	3.496273e-9
21	238539_at	217725_x_at	NM_015640	SERBP1	0.676466	1.638529e-12	7.575575e-8	3.607417e-9
22	238539_at	202516_s_at	NM_004087	DLG1	0.675866	1.743565e-12	8.061196e-8	3.664180e-9
23	227139_s_at	230265_at	BE671138	SEL1L	0.674863	1.933674e-12	8.940147e-8	3.887020e-9
24	238539_at	212514_x_at	R60068	DDX3X	0.673425	2.241562e-12	1.036364e-7	4.318183e-9
25	227139_s_at	201300_s_at	NM_000311	PRNP	0.672884	2.369241e-12	1.095395e-7	4.381579e-9
26	238539_at	205895_s_at	NM_004741	NOLC1	0.672484	2.467913e-12	1.141015e-7	4.388519e-9
27	238539_at	211356_x_at	U66495	LEPR	0.672316	2.510632e-12	1.160765e-7	4.299131e-9
28	238539_at	1555996_s_at	AI332397	EIF4A2	0.669844	3.226943e-12	1.491945e-7	5.328374e-9
29	238539_at	211355_x_at	U52914	LEPR	0.669239	3.430005e-12	1.585829e-7	5.468374e-9
30	238539_at	212409_s_at	AK021613	TOR1AIP1	0.666130	4.684274e-12	2.165727e-7	7.219091e-9
31	238539_at	221158_at	NM_013329	GCFC1	0.666116	4.690594e-12	2.168649e-7	6.995643e-9
32	238539_at	212286_at	AW572909	ANKRD12	0.666073	4.710783e-12	2.177984e-7	6.806199e-9
33	227139_s_at	224320_s_at	BC005170	MCM8	0.664109	5.724115e-12	2.646487e-7	8.019658e-9
34	238539_at	212720_at	AI670847	PAPOLA	0.660910	7.838675e-12	3.624133e-7	1.065921e-8
35	238539_at	222697_s_at	AI521709	ABHD10	0.660618	8.065473e-12	3.728991e-7	1.065426e-8
36	238539_at	215207_x_at	BF695847		0.659808	8.727701e-12	4.035165e-7	1.120879e-8
37	238539_at	215509_s_at	AL137654	BUB1	0.659357	9.118519e-12	4.215856e-7	1.139421e-8
38	238539_at	1564053_a_at	AK093081	YTHDF3	0.659277	9.189558e-12	4.248700e-7	1.118079e-8
39	238539_at	1554508_at	BC029917	PIK3AP1	0.658157	1.024195e-11	4.735263e-7	1.214170e-8
40	238539_at	214544_s_at	NM_003825	SNAP23	0.656085	1.250421e-11	5.781195e-7	1.445299e-8
41	238539_at	217777_s_at	NM_016395	PTPLAD1	0.655942	1.267668e-11	5.860934e-7	1.429496e-8
42	227139_s_at	220044_x_at	NM_016424	LUC7L3	0.655886	1.274504e-11	5.892543e-7	1.402987e-8
43	238539_at	238907_at	BG288755	ZNF780A	0.655409	1.334047e-11	6.167835e-7	1.434380e-8
44	227139_s_at	202314_at	NM_000786	CYP51A1	0.655166	1.365329e-11	6.312460e-7	1.434650e-8
45	238539_at	211559_s_at	L49506	CCNG2	0.654823	1.410886e-11	6.523090e-7	1.449576e-8
46	238539_at	212008_at	N29889	UBXN4	0.654001	1.525868e-11	7.054700e-7	1.533631e-8
47	238539_at	220735_s_at	NM_020654	SENP7	0.653872	1.544594e-11	7.141274e-7	1.519420e-8
48	238539_at	205716_at	NM_018843	SLC25A40	0.653800	1.555284e-11	7.190701e-7	1.498063e-8
49	227139_s_at	202114_at	NM_003100	SNX2	0.653311	1.629155e-11	7.532236e-7	1.537191e-8
50	227139_s_at	224866_at	AK024967	FAR1	0.653282	1.633650e-11	7.553015e-7	1.510603e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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