[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4981	204544_at	NM_007216	HPS5		Hermansky-Pudlak syndrome 5

Fetching correlation data, please wait...
Getting list of correlations for id 4981.
Getting list of p-values for id 4981.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.132 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204544_at	224956_at	AI743689	NUFIP2	0.659034	9.408862e-12	2.175047e-7	2.175047e-7
2	204544_at	206715_at	NM_012252	TFEC	0.635470	8.388583e-11	1.939189e-6	9.695944e-7
3	204544_at	208249_s_at	NM_014305	TGDS	0.622514	2.584647e-10	5.974928e-6	1.991643e-6
4	204544_at	239761_at	AI088120	GCNT1	0.620253	3.128814e-10	7.232878e-6	1.808220e-6
5	204544_at	218102_at	NM_015954	DERA	0.615980	4.471182e-10	1.033603e-5	2.067206e-6
6	204544_at	227447_at	AA525163	SKIV2L2	0.612147	6.131110e-10	1.417329e-5	2.362214e-6
7	204544_at	222496_s_at	AW241742	RBM47	0.604746	1.114725e-9	2.576910e-5	3.681300e-6
8	204544_at	208893_s_at	BC005047	DUSP6	0.603135	1.267034e-9	2.929003e-5	3.661254e-6
9	204544_at	226897_s_at	AW169959	ZC3H7A	0.603121	1.268463e-9	2.932307e-5	3.258119e-6
10	204544_at	222715_s_at	BE856321	SYNRG	0.601288	1.466251e-9	3.389533e-5	3.389533e-6
11	204544_at	218716_x_at	NM_012123	MTO1	0.601275	1.467773e-9	3.393052e-5	3.084592e-6
12	204544_at	225260_s_at	AL551823	MRPL32	0.600254	1.590413e-9	3.676558e-5	3.063799e-6
13	204544_at	223215_s_at	AF151047	JKAMP	0.598049	1.889785e-9	4.368616e-5	3.360474e-6
14	204544_at	233080_s_at	AF155096	PRPF40A	0.597337	1.997411e-9	4.617415e-5	3.298154e-6
15	204544_at	204222_s_at	NM_006851	GLIPR1	0.593206	2.747655e-9	6.351753e-5	4.234502e-6
16	204544_at	225099_at	AA126446	FBXO45	0.591671	3.089605e-9	7.142240e-5	4.463900e-6
17	204544_at	225805_at	AW137669	HNRNPU	0.589446	3.658376e-9	8.457068e-5	4.974746e-6
18	204544_at	232902_s_at	BG165118	RARS2	0.587242	4.319522e-9	9.985438e-5	5.547466e-6
19	204544_at	210849_s_at	AF135593	VPS41	0.584377	5.351008e-9	1.236993e-4	6.510487e-6
20	204544_at	204234_s_at	AI476267	ZNF195	0.584174	5.432342e-9	1.255795e-4	6.278973e-6
21	204544_at	235385_at	AI935334	MARCH1	0.583955	5.521508e-9	1.276407e-4	6.078129e-6
22	204544_at	234050_at	AK025272	TAGAP	0.580255	7.255244e-9	1.677195e-4	7.623612e-6
23	204544_at	1554351_a_at	BC009506	TIPRL	0.578219	8.419765e-9	1.946397e-4	8.462596e-6
24	204544_at	228505_s_at	N49836	TMEM170A	0.572356	1.285152e-8	2.970885e-4	1.237869e-5
25	204544_at	212702_s_at	N45111	BICD2	0.572143	1.304880e-8	3.016490e-4	1.206596e-5
26	204544_at	238963_at	BG106093		0.570761	1.439785e-8	3.328350e-4	1.280135e-5
27	204544_at	218203_at	NM_013338	ALG5	0.570340	1.483504e-8	3.429416e-4	1.270154e-5
28	204544_at	218521_s_at	NM_018299	UBE2W	0.570012	1.518446e-8	3.510192e-4	1.253640e-5
29	204544_at	209790_s_at	BC000305	CASP6	0.568802	1.654118e-8	3.823824e-4	1.318560e-5
30	204544_at	212474_at	D87682	AVL9	0.568007	1.749422e-8	4.044140e-4	1.348047e-5
31	204544_at	225675_at	AW976269	C14orf101	0.567593	1.801207e-8	4.163850e-4	1.343178e-5
32	204544_at	222691_at	AL355815	SLC35B3	0.567334	1.834305e-8	4.240363e-4	1.325114e-5
33	204544_at	224714_at	AL542544	MKI67IP	0.567275	1.841848e-8	4.257801e-4	1.290243e-5
34	204544_at	230532_at	BF001685	CXorf38	0.565891	2.029480e-8	4.691549e-4	1.379867e-5
35	204544_at	201297_s_at	AK023321	MOBKL1B	0.564494	2.237093e-8	5.171488e-4	1.477568e-5
36	204544_at	212808_at	AI884627	NFATC2IP	0.564078	2.302827e-8	5.323446e-4	1.478735e-5
37	204544_at	211297_s_at	L20320	CDK7	0.563681	2.367197e-8	5.472249e-4	1.478986e-5
38	204544_at	218987_at	NM_018179	ATF7IP	0.562174	2.627612e-8	6.074251e-4	1.598487e-5
39	204544_at	218322_s_at	NM_016234	ACSL5	0.561950	2.668529e-8	6.168839e-4	1.581754e-5
40	204544_at	218268_at	NM_022771	TBC1D15	0.560450	2.958695e-8	6.839614e-4	1.709904e-5
41	204544_at	218581_at	NM_022060	ABHD4	-0.560376	2.973748e-8	6.874413e-4	1.676686e-5
42	204544_at	213021_at	AI741876	GOSR1	0.559448	3.169109e-8	7.326028e-4	1.744292e-5
43	204544_at	207515_s_at	NM_004875	POLR1C	0.559106	3.244034e-8	7.499232e-4	1.744008e-5
44	204544_at	221423_s_at	NM_030799	YIPF5	0.558395	3.405531e-8	7.872565e-4	1.789219e-5
45	204544_at	219212_at	NM_016299	HSPA14	0.557942	3.512197e-8	8.119145e-4	1.804255e-5
46	204544_at	218604_at	NM_014319	LEMD3	0.557784	3.550275e-8	8.207170e-4	1.784167e-5
47	204544_at	209902_at	U49844	ATR	0.556649	3.834780e-8	8.864862e-4	1.886141e-5
48	204544_at	204171_at	NM_003161	RPS6KB1	0.556468	3.882113e-8	8.974281e-4	1.869642e-5
49	204544_at	218519_at	NM_017945	SLC35A5	0.555696	4.090559e-8	9.456146e-4	1.929826e-5
50	204544_at	218006_s_at	NM_006963	ZNF22	0.555456	4.157352e-8	9.610551e-4	1.922110e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation